Guide to the Human Genome
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Name: WDR93 Sequence: fasta or formatted (686aa) NCBI GI: 40556361
Description:

WD repeat domain 93

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         44           2
 C cysteine            2.8         19           1
 D aspartate           5.2         36           2
 E glutamate           6.7         46           3
 F phenylalanine       4.8         33           2
 G glycine             5.4         37           2
 H histidine           1.9         13           1
 I isoleucine          5.4         37           2
 K lysine              7.9         54           3
 L leucine            10.2         70           2
 M methionine          2.2         15           1
 N asparagine          3.4         23           1
 P proline             7.9         54           3
 Q glutamine           4.8         33           2
 R arginine            2.9         20           1
 S serine              6.9         47           3
 T threonine           3.8         26           2
 V valine              6.1         42           2
 W tryptophan          1.9         13           1
 Y tyrosine            3.5         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 93 
ITSN2                 0.008   intersectin 2 isoform 3 
ITSN2                 0.008   intersectin 2 isoform 1 
ITSN2                 0.008   intersectin 2 isoform 2 
CXorf30               0.005   hypothetical protein LOC645090 
BATF2                 0.005   basic leucine zipper transcription factor, ATF-like ...
SERAC1                0.004   serine active site containing 1 
ZNF646                0.004   zinc finger protein 646 
NUP214                0.004   nucleoporin 214kDa 
FBXW8                 0.004   F-box and WD repeat domain containing 8 isoform 2 [H...
FBXW8                 0.004   F-box and WD repeat domain containing 8 isoform 1 [H...
WDR5B                 0.004   WD repeat domain 5B 
MYBL2                 0.004   MYB-related protein B 
STAMBP                0.004   STAM binding protein 
STAMBP                0.004   STAM binding protein 
STAMBP                0.004   STAM binding protein 
CCDC136               0.004   coiled-coil domain containing 136 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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