Search of human proteins with 40254931

Search of human proteins with 40254931

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40254931 hypothetical protein LOC55732 [Homo sapiens]
         (853 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40254931 hypothetical protein LOC55732 [Homo sapiens]             1691   0.0  
gi|13699824 kinesin family member 11 [Homo sapiens]                    37   0.059
gi|115527120 nebulin [Homo sapiens]                                    36   0.13 
gi|20336199 ataxia telangiectasia mutated isoform 2 [Homo sapiens]     35   0.30 
gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]     35   0.30 
gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, pa...    35   0.30 
gi|4503627 coagulation factor XI precursor [Homo sapiens]              35   0.30 
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     35   0.30 
gi|194353959 phosphoinositide-3-kinase, class 2 gamma polypeptid...    33   1.1  
gi|22027509 cell division cycle associated 4 [Homo sapiens]            33   1.5  
gi|22027511 cell division cycle associated 4 [Homo sapiens]            33   1.5  
gi|38176300 nestin [Homo sapiens]                                      32   2.5  
gi|7705415 hook homolog 1 [Homo sapiens]                               32   3.3  
gi|4504653 interleukin 18 proprotein [Homo sapiens]                    31   4.3  
gi|46249373 preferentially expressed antigen in melanoma [Homo s...    30   7.3  
gi|46249371 preferentially expressed antigen in melanoma [Homo s...    30   7.3  
gi|46249369 preferentially expressed antigen in melanoma [Homo s...    30   7.3  
gi|46249367 preferentially expressed antigen in melanoma [Homo s...    30   7.3  
gi|5174641 preferentially expressed antigen in melanoma [Homo sa...    30   7.3  
gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]         30   7.3  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       30   9.5  

>gi|40254931 hypothetical protein LOC55732 [Homo sapiens]
          Length = 853

 Score = 1691 bits (4378), Expect = 0.0
 Identities = 853/853 (100%), Positives = 853/853 (100%)

Query: 1   MFLPHMNHLTLEQTFFSQVLPKTVKLFDDMMYELTSQARGLSSQNLEIQTTLRNILQTMV 60
           MFLPHMNHLTLEQTFFSQVLPKTVKLFDDMMYELTSQARGLSSQNLEIQTTLRNILQTMV
Sbjct: 1   MFLPHMNHLTLEQTFFSQVLPKTVKLFDDMMYELTSQARGLSSQNLEIQTTLRNILQTMV 60

Query: 61  QLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYSGCLHLVSDL 120
           QLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYSGCLHLVSDL
Sbjct: 61  QLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYSGCLHLVSDL 120

Query: 121 LQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIVIHSLLDICSVISSMDHAFHA 180
           LQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIVIHSLLDICSVISSMDHAFHA
Sbjct: 121 LQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIVIHSLLDICSVISSMDHAFHA 180

Query: 181 NTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQSDAQDNADYR 240
           NTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQSDAQDNADYR
Sbjct: 181 NTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQSDAQDNADYR 240

Query: 241 LFQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQLYLQIHSKFPPSLYATRISKAHQE 300
           LFQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQLYLQIHSKFPPSLYATRISKAHQE
Sbjct: 241 LFQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQLYLQIHSKFPPSLYATRISKAHQE 300

Query: 301 EIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDLPCELQFPQCLLLVVVMDKLPSQPKEV 360
           EIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDLPCELQFPQCLLLVVVMDKLPSQPKEV
Sbjct: 301 EIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDLPCELQFPQCLLLVVVMDKLPSQPKEV 360

Query: 361 QTLWCTDSQVSETTTRISLLKAVFYSFEQCSGELSLPVHLQGLKSKGKAEVAVTLYQHVC 420
           QTLWCTDSQVSETTTRISLLKAVFYSFEQCSGELSLPVHLQGLKSKGKAEVAVTLYQHVC
Sbjct: 361 QTLWCTDSQVSETTTRISLLKAVFYSFEQCSGELSLPVHLQGLKSKGKAEVAVTLYQHVC 420

Query: 421 VHLCTFITSFHPSLFAELDAALLNAVLSANMITSLLAMDAWCFLARYGTAELCAHHVTIV 480
           VHLCTFITSFHPSLFAELDAALLNAVLSANMITSLLAMDAWCFLARYGTAELCAHHVTIV
Sbjct: 421 VHLCTFITSFHPSLFAELDAALLNAVLSANMITSLLAMDAWCFLARYGTAELCAHHVTIV 480

Query: 481 AHLIKSCPGECYQLINLSILLKRLFFFMAPPHQLEFIQKFSPKEAENLPLWQHISFQALP 540
           AHLIKSCPGECYQLINLSILLKRLFFFMAPPHQLEFIQKFSPKEAENLPLWQHISFQALP
Sbjct: 481 AHLIKSCPGECYQLINLSILLKRLFFFMAPPHQLEFIQKFSPKEAENLPLWQHISFQALP 540

Query: 541 PELREQTVHEVTTVGTAECRKWLSRSRTLGELESLNTVLSALLAVCNSAGEALDTGKQTA 600
           PELREQTVHEVTTVGTAECRKWLSRSRTLGELESLNTVLSALLAVCNSAGEALDTGKQTA
Sbjct: 541 PELREQTVHEVTTVGTAECRKWLSRSRTLGELESLNTVLSALLAVCNSAGEALDTGKQTA 600

Query: 601 IIEVVSQLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLE 660
           IIEVVSQLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLE
Sbjct: 601 IIEVVSQLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLE 660

Query: 661 LPDYVRLAMLDFVSSLGKLFIPEAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFA 720
           LPDYVRLAMLDFVSSLGKLFIPEAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFA
Sbjct: 661 LPDYVRLAMLDFVSSLGKLFIPEAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFA 720

Query: 721 EGTNHEEIVPQCLSSEETKNKVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVE 780
           EGTNHEEIVPQCLSSEETKNKVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVE
Sbjct: 721 EGTNHEEIVPQCLSSEETKNKVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVE 780

Query: 781 EAKRSSLQPYAKRARQEFPWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQE 840
           EAKRSSLQPYAKRARQEFPWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQE
Sbjct: 781 EAKRSSLQPYAKRARQEFPWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQE 840

Query: 841 RMDKLKRYIHTLG 853
           RMDKLKRYIHTLG
Sbjct: 841 RMDKLKRYIHTLG 853


>gi|13699824 kinesin family member 11 [Homo sapiens]
          Length = 1056

 Score = 37.4 bits (85), Expect = 0.059
 Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 37/276 (13%)

Query: 20  LPKTVKLFDDMMYELTSQARGLSSQNLEIQTTLRNILQTMVQLLGA--LTGCVQHICATQ 77
           L +  +LF D   EL      L ++  E++TT +++ +T +QL+    +T  ++   +T+
Sbjct: 433 LNRVTELFMDNKNELDQCKSDLQNKTQELETTQKHLQETKLQLVKEEYITSALE---STE 489

Query: 78  ESI------ILENIQSLPSSV------LHIIKSTFVHCKNSESVYSGCLHLVSDLLQALF 125
           E +      +L  ++     V      L   K+   H   ++ ++   L+ + + ++ L 
Sbjct: 490 EKLHDAASKLLNTVEETTKDVSGLHSKLDRKKAVDQHNAEAQDIFGKNLNSLFNNMEELI 549

Query: 126 KEAYSLQKQLMELLDMVCMDPLVDDNDDILNMV--IVIHSLLDICSVISSMDHAFHANTW 183
           K+  S QK ++E +       L+  +   L+ +  + + SL  I   +S+     H +  
Sbjct: 550 KDGSSKQKAMLE-VHKTLFGNLLSSSVSALDTITTVALGSLTSIPENVST-----HVSQ- 602

Query: 184 KFIIKQSLKHQSI-IKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQSDAQDNADYR-L 241
             I    LK QS+  +S+   +++I  L  D+L S    L        S  + N+  + +
Sbjct: 603 --IFNMILKEQSLAAESKTVLQELINVLKTDLLSSLEMIL---SPTVVSILKINSQLKHI 657

Query: 242 FQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQL 277
           F+ +L +    A+ +    KE   FLS  C  LH+L
Sbjct: 658 FKTSLTV----ADKIEDQKKELDGFLSILCNNLHEL 689


>gi|115527120 nebulin [Homo sapiens]
          Length = 6669

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 19/134 (14%)

Query: 719  FAEGTNHEEIVPQCLSSEETKNKVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVT 778
            + +  +H  ++P  L+ E ++N +         +      K +     KGI W P  ++ 
Sbjct: 1649 YRQSYHHYTLLPDALNVEHSRNAMQ--------IQSDNLYKSDFTNWMKGIGWVPIESLE 1700

Query: 779  VEEAKRSSLQPYAKRARQEFPWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEAL 838
            VE+AK++      K+ RQ  P + ++  A+ T+  AL  +            L+M+    
Sbjct: 1701 VEKAKKAGEILSEKKYRQH-PEKLKFTYAMDTMEQALNKSNK----------LNMDKRLY 1749

Query: 839  QERMDKLKRYIHTL 852
             E+ +K K  IH +
Sbjct: 1750 TEKWNKDKTTIHVM 1763


>gi|20336199 ataxia telangiectasia mutated isoform 2 [Homo sapiens]
          Length = 1708

 Score = 35.0 bits (79), Expect = 0.30
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 52  LRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYS 111
           LR+++ T++  +     C+  +     S+  + +         + ++   +CK++   + 
Sbjct: 117 LRDVIYTLIHYINQRPSCIMDVSLRSFSLCCDLLSQ-------VCQTAVTYCKDALENH- 168

Query: 112 GCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIVIHSLLD 166
             LH++   L  L  E   +QKQ+++LL       LV DN D  N+ I I  LLD
Sbjct: 169 --LHVIVGTLIPLVYEQVEVQKQVLDLLKY-----LVIDNKDNENLYITI-KLLD 215


>gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]
          Length = 3056

 Score = 35.0 bits (79), Expect = 0.30
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 52   LRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYS 111
            LR+++ T++  +     C+  +     S+  + +         + ++   +CK++   + 
Sbjct: 1465 LRDVIYTLIHYINQRPSCIMDVSLRSFSLCCDLLSQ-------VCQTAVTYCKDALENH- 1516

Query: 112  GCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIVIHSLLD 166
              LH++   L  L  E   +QKQ+++LL       LV DN D  N+ I I  LLD
Sbjct: 1517 --LHVIVGTLIPLVYEQVEVQKQVLDLLKY-----LVIDNKDNENLYITI-KLLD 1563


>gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, partial
            [Homo sapiens]
          Length = 2934

 Score = 35.0 bits (79), Expect = 0.30
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 52   LRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYS 111
            LR+++ T++  +     C+  +     S+  + +         + ++   +CK++   + 
Sbjct: 1343 LRDVIYTLIHYINQRPSCIMDVSLRSFSLCCDLLSQ-------VCQTAVTYCKDALENH- 1394

Query: 112  GCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIVIHSLLD 166
              LH++   L  L  E   +QKQ+++LL       LV DN D  N+ I I  LLD
Sbjct: 1395 --LHVIVGTLIPLVYEQVEVQKQVLDLLKY-----LVIDNKDNENLYITI-KLLD 1441


>gi|4503627 coagulation factor XI precursor [Homo sapiens]
          Length = 625

 Score = 35.0 bits (79), Expect = 0.30
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 20/110 (18%)

Query: 341 PQCLLLVVVMDKLPSQPKEVQTLWCT---DSQVSETTTRISLLKAVF-YSFEQCSGELS- 395
           P+CLL     +     P E  T W T      V+ET  R++   A+  YSF+QCS ++S 
Sbjct: 54  PRCLLFTFTAES----PSEDPTRWFTCVLKDSVTETLPRVNRTAAISGYSFKQCSHQISA 109

Query: 396 ------LPVHLQGLKSKGKAEVAVTLYQHVCV-----HLCTFITSFHPSL 434
                 + + ++G+        +    Q  C      H  T+ T   PSL
Sbjct: 110 CNKDIYVDLDMKGINYNSSVAKSAQECQERCTDDVHCHFFTYATRQFPSL 159


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 35.0 bits (79), Expect = 0.30
 Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 31   MYELTSQARGLSSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESI-ILENIQSLP 89
            +++L +Q    S  N ++Q     ++Q+  Q    L    Q +   Q SI  L N + L 
Sbjct: 1246 LHQLQAQVLVDSDNNSKLQVDYTGLIQSYEQNETKLKNFGQELAQVQHSIGQLCNTKDLL 1305

Query: 90   SSVLHIIK-----STFVHCKNSESVYSGCLHLVSDLLQALFKEAYSLQKQLMELLDMVCM 144
               L II      ++ +  +++E + +    ++S+  + L +E   L+K L E      +
Sbjct: 1306 LGKLDIISPQLSSASLLTPQSAECLRASKSEVLSESSELLQQELEELRKSLQE--KDATI 1363

Query: 145  DPLVDDNDDILNMVIVIHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKHK 204
              L ++N          H L D  +  S ++   H  T    IKQ  + Q +++  LK K
Sbjct: 1364 RTLQENN----------HRLSDSIAATSELERKEHEQT-DSEIKQLKEKQDVLQKLLKEK 1412

Query: 205  DIITSLCEDILFS 217
            D++     D L S
Sbjct: 1413 DLLIKAKSDQLLS 1425


>gi|194353959 phosphoinositide-3-kinase, class 2 gamma polypeptide
           [Homo sapiens]
          Length = 1445

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 24/183 (13%)

Query: 260 AKEFLPFLSDSCCTLHQLYLQIHSKFPPSLYATR-----ISKAHQEEIAGAFLVTLDPLI 314
           ++EFL   +D C   H+++ +  S     L  +R     +S+ H+E+ +  +L       
Sbjct: 339 SEEFLQ--NDHCLGSHKMFQKDKSVIQLHLQKSREAPGKLSRKHEEDHSQFYL------- 389

Query: 315 SQLLTFQPFMQVVLDSKLDLPCELQFPQCLLLVV---VMDKLPSQPKEVQTLWCTDS-QV 370
           +QLL F    +V     L L  +  F    LL     V + +    K    L C ++ Q+
Sbjct: 390 NQLLEFMHIWKVSRQCLLTLIRKYDFHLKYLLKTQENVYNIIEEVKKICSVLGCVETKQI 449

Query: 371 SETTTRISL-LKAVFYSFEQCSGELSLPVHLQGLKSKGKAEVAVTLYQHVCVHLCTFITS 429
           ++    +SL L+    +F Q S         +GL  K   E++ ++YQ + V+  +F   
Sbjct: 450 TDAVNELSLILQRKGENFYQSS-----ETSAKGLIEKVTTELSTSIYQLINVYCNSFYAD 504

Query: 430 FHP 432
           F P
Sbjct: 505 FQP 507


>gi|22027509 cell division cycle associated 4 [Homo sapiens]
          Length = 241

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 16/159 (10%)

Query: 188 KQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQS--------DAQDNADY 239
           +QSL   S++K QL H  +  +LC  +L + ++  Q+ E+MTQ          A + A  
Sbjct: 34  RQSLLDMSLVKLQLCHMLVEPNLCRSVLIA-NTVRQIQEEMTQDGTWRTVAPQAAERAPL 92

Query: 240 RLFQKTLKLCR-FFANSLLHYAKEFLPFLSDSCC--TLHQLYLQIHSKFPPSLYATRISK 296
                T  LCR  +     H A    P L D      +  L     ++ P  L ++    
Sbjct: 93  DRLVSTEILCRAAWGQEGAHPA----PGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEM 148

Query: 297 AHQEEIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDLP 335
               E  G+F  +LD +   L T  P     L S +D P
Sbjct: 149 DGPRENRGSFHKSLDQIFETLETKNPSCMEELFSDVDSP 187


>gi|22027511 cell division cycle associated 4 [Homo sapiens]
          Length = 241

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 16/159 (10%)

Query: 188 KQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQS--------DAQDNADY 239
           +QSL   S++K QL H  +  +LC  +L + ++  Q+ E+MTQ          A + A  
Sbjct: 34  RQSLLDMSLVKLQLCHMLVEPNLCRSVLIA-NTVRQIQEEMTQDGTWRTVAPQAAERAPL 92

Query: 240 RLFQKTLKLCR-FFANSLLHYAKEFLPFLSDSCC--TLHQLYLQIHSKFPPSLYATRISK 296
                T  LCR  +     H A    P L D      +  L     ++ P  L ++    
Sbjct: 93  DRLVSTEILCRAAWGQEGAHPA----PGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEM 148

Query: 297 AHQEEIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDLP 335
               E  G+F  +LD +   L T  P     L S +D P
Sbjct: 149 DGPRENRGSFHKSLDQIFETLETKNPSCMEELFSDVDSP 187


>gi|38176300 nestin [Homo sapiens]
          Length = 1621

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 17/111 (15%)

Query: 747  EKTGFVDETEAAKVERVKQEKGIFWEPFANVTVEEAKRSSLQPYAKRARQEF-------- 798
            E  GF DE E+ +     QE+G   EP A      +   SLQ  +   R EF        
Sbjct: 1408 ESDGFADEEESGEEGEEDQEEG--REPGAGRWGPGSSVGSLQALSSSQRGEFLESDSVSV 1465

Query: 799  --PWEEEYRSALHTIAGALE-ATESLLQKGPAPAWLSMEMEALQ-ERMDKL 845
              PW++  R A   +AGA + A E+  Q    P+    E + +  ER DK+
Sbjct: 1466 SVPWDDSLRGA---VAGAPKTALETESQDSAEPSGSEEESDPVSLEREDKV 1513


>gi|7705415 hook homolog 1 [Homo sapiens]
          Length = 728

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 14/193 (7%)

Query: 61  QLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVHCKNSESVYSGCLHLVSDL 120
           +LL  + GC  +    QE I  +NI +L  SV H++ +      + E + S     V +L
Sbjct: 119 RLLQLILGCAINCEKKQEHI--QNIMTLEESVQHVVMTAIQELMSKEILSSPPNDAVGEL 176

Query: 121 LQALFKEAYSLQKQLMEL--LDMVC--MDPLVDDNDDILNMVIVIHSLLDICSVISSMDH 176
            Q L +    LQ+ L E   L   C  +D  V    D  N ++  + +++    +  +D 
Sbjct: 177 EQQLKRALEELQEALAEKEELRQRCEELDMQVTTLQDEKNSLVSENEMMN--EKLDQLDG 234

Query: 177 AF-HANTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQSDAQD 235
           +F   NT   ++ +   H  +   QL+ ++      +D  +  H C +L +Q+ +   ++
Sbjct: 235 SFDDPNT---VVAKKYFHAQLQLEQLQEENFRLEAAKDD-YRVH-CEELEKQLIEFQHRN 289

Query: 236 NADYRLFQKTLKL 248
           +    L ++T  L
Sbjct: 290 DELTSLAEETRAL 302


>gi|4504653 interleukin 18 proprotein [Homo sapiens]
          Length = 193

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 178 FHANTWKFIIKQSLKHQSIIKSQLKHK-DIITSLCEDILFSFHSCLQLAEQMTQSDAQDN 236
           F  NT  FI +     +S    +L+ K  +I +L + +LF       L E MT SD +DN
Sbjct: 18  FIDNTLYFIAEDDENLESDYFGKLESKLSVIRNLNDQVLFIDQGNRPLFEDMTDSDCRDN 77

Query: 237 ADYRLF 242
           A   +F
Sbjct: 78  APRTIF 83


>gi|46249373 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 42  SSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFV 101
           +SQ L +Q      + ++  L G L   ++H+    E++ + N +     V+H+ +S  V
Sbjct: 289 TSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLETLSITNCRLSEGDVMHLSQSPSV 348

Query: 102 HCKNSESVYSGCLHLVS-DLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV 160
              +  S+    L  VS + LQAL      L++    L D+V  +  + D     + ++ 
Sbjct: 349 SQLSVLSLSGVMLTDVSPEPLQAL------LERASATLQDLVFDECGITD-----DQLLA 397

Query: 161 IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKH 203
           +   L  CS ++++  +F+ N+      QSL    I  S L H
Sbjct: 398 LLPSLSHCSQLTTL--SFYGNSISISALQSLLQHLIGLSNLTH 438


>gi|46249371 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 42  SSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFV 101
           +SQ L +Q      + ++  L G L   ++H+    E++ + N +     V+H+ +S  V
Sbjct: 289 TSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLETLSITNCRLSEGDVMHLSQSPSV 348

Query: 102 HCKNSESVYSGCLHLVS-DLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV 160
              +  S+    L  VS + LQAL      L++    L D+V  +  + D     + ++ 
Sbjct: 349 SQLSVLSLSGVMLTDVSPEPLQAL------LERASATLQDLVFDECGITD-----DQLLA 397

Query: 161 IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKH 203
           +   L  CS ++++  +F+ N+      QSL    I  S L H
Sbjct: 398 LLPSLSHCSQLTTL--SFYGNSISISALQSLLQHLIGLSNLTH 438


>gi|46249369 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 42  SSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFV 101
           +SQ L +Q      + ++  L G L   ++H+    E++ + N +     V+H+ +S  V
Sbjct: 289 TSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLETLSITNCRLSEGDVMHLSQSPSV 348

Query: 102 HCKNSESVYSGCLHLVS-DLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV 160
              +  S+    L  VS + LQAL      L++    L D+V  +  + D     + ++ 
Sbjct: 349 SQLSVLSLSGVMLTDVSPEPLQAL------LERASATLQDLVFDECGITD-----DQLLA 397

Query: 161 IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKH 203
           +   L  CS ++++  +F+ N+      QSL    I  S L H
Sbjct: 398 LLPSLSHCSQLTTL--SFYGNSISISALQSLLQHLIGLSNLTH 438


>gi|46249367 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 42  SSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFV 101
           +SQ L +Q      + ++  L G L   ++H+    E++ + N +     V+H+ +S  V
Sbjct: 289 TSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLETLSITNCRLSEGDVMHLSQSPSV 348

Query: 102 HCKNSESVYSGCLHLVS-DLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV 160
              +  S+    L  VS + LQAL      L++    L D+V  +  + D     + ++ 
Sbjct: 349 SQLSVLSLSGVMLTDVSPEPLQAL------LERASATLQDLVFDECGITD-----DQLLA 397

Query: 161 IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKH 203
           +   L  CS ++++  +F+ N+      QSL    I  S L H
Sbjct: 398 LLPSLSHCSQLTTL--SFYGNSISISALQSLLQHLIGLSNLTH 438


>gi|5174641 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 42  SSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFV 101
           +SQ L +Q      + ++  L G L   ++H+    E++ + N +     V+H+ +S  V
Sbjct: 289 TSQFLSLQCLQALYVDSLFFLRGRLDQLLRHVMNPLETLSITNCRLSEGDVMHLSQSPSV 348

Query: 102 HCKNSESVYSGCLHLVS-DLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV 160
              +  S+    L  VS + LQAL      L++    L D+V  +  + D     + ++ 
Sbjct: 349 SQLSVLSLSGVMLTDVSPEPLQAL------LERASATLQDLVFDECGITD-----DQLLA 397

Query: 161 IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKH 203
           +   L  CS ++++  +F+ N+      QSL    I  S L H
Sbjct: 398 LLPSLSHCSQLTTL--SFYGNSISISALQSLLQHLIGLSNLTH 438


>gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]
          Length = 291

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 239 YRLFQKTLK--LCRFFANSLLHYAKEFLPFLSDSCCTLHQLYLQIHSKFPPSLYATRISK 296
           Y L +K +K   C+F  ++ +   KE   F     CT  +  L +H+++P   Y T  +K
Sbjct: 199 YFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTG-TK 257

Query: 297 AHQEEIAGAFLVTLDPLISQLL 318
            +Q E        L P   +LL
Sbjct: 258 CYQGEYCKFSHAPLTPETQELL 279


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 30.0 bits (66), Expect = 9.5
 Identities = 19/75 (25%), Positives = 35/75 (46%)

Query: 593  LDTGKQTAIIEVVSQLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTL 652
            LD      + +++ Q     N+K +  QP  +     L+ + G++I   D +  +    +
Sbjct: 998  LDRASHPIVQKLICQHIVPGNVKSLLKQPIPEPKGGRLIQVEGYWIAVGDKEPTIDETYI 1057

Query: 653  QTSLLKLELPDYVRL 667
             TS +KL L D VR+
Sbjct: 1058 LTSSVKLNLRDIVRV 1072


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,032,363
Number of Sequences: 37866
Number of extensions: 1168383
Number of successful extensions: 3286
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3260
Number of HSP's gapped (non-prelim): 44
length of query: 853
length of database: 18,247,518
effective HSP length: 111
effective length of query: 742
effective length of database: 14,044,392
effective search space: 10420938864
effective search space used: 10420938864
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.