Guide to the Human Genome
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Name: IL18 Sequence: fasta or formatted (193aa) NCBI GI: 4504653
Description:

interleukin 18 proprotein

Referenced in:

Interferon
Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          7           2
 C cysteine            2.6          5           1
 D aspartate          10.4         20           2
 E glutamate           8.8         17           1
 F phenylalanine       7.3         14           2
 G glycine             3.1          6           1
 H histidine           0.5          1           1
 I isoleucine          8.8         17           2
 K lysine              7.8         15           2
 L leucine             6.7         13           1
 M methionine          4.1          8           1
 N asparagine          6.7         13           1
 P proline             3.6          7           2
 Q glutamine           3.1          6           1
 R arginine            4.1          8           1
 S serine              8.3         16           3
 T threonine           3.6          7           1
 V valine              4.1          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 18 proprotein 
MAP3K15               0.022   mitogen-activated protein kinase kinase kinase 15 [...
CCDC38                0.019   coiled-coil domain containing 38 
C1orf112              0.016   hypothetical protein LOC55732 
SERPINB5              0.011   serine (or cysteine) proteinase inhibitor, clade B ...
ANKRD11               0.011   ankyrin repeat domain 11 
TTRAP                 0.008   TRAF and TNF receptor-associated protein 
SOS1                  0.008   son of sevenless homolog 1 
RAG2                  0.005   recombination activating gene 2 
LIMK2                 0.005   LIM domain kinase 2 isoform 1 
LIMK2                 0.005   LIM domain kinase 2 isoform 2b 
LIMK2                 0.005   LIM domain kinase 2 isoform 2a 
NEU3                  0.005   sialidase 3 
NOSIP                 0.005   nitric oxide synthase interacting protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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