Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 40217833
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40217833 G protein-coupled receptor family C, group 5,
member C isoform b [Homo sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40217833 G protein-coupled receptor family C, group 5, member... 925 0.0
gi|40217831 G protein-coupled receptor family C, group 5, member... 923 0.0
gi|7706451 G protein-coupled receptor, family C, group 5, member... 275 5e-74
gi|4506403 G protein-coupled receptor, family C, group 5, member... 208 7e-54
gi|8923705 G protein-coupled receptor, family C, group 5, member... 198 1e-50
gi|66529100 glutamate receptor, metabotropic 2 isoform a precurs... 49 7e-06
gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo s... 47 5e-05
gi|166999098 glutamate receptor, metabotropic 1 isoform alpha pr... 43 7e-04
gi|166999223 glutamate receptor, metabotropic 1 isoform beta pre... 42 0.001
gi|112789566 taste receptor, type 1, member 2 [Homo sapiens] 39 0.007
gi|194248052 glutamate receptor, metabotropic 2 isoform b [Homo ... 39 0.013
gi|112807234 G protein-coupled receptor, family C, group 6, memb... 38 0.022
gi|37577159 calcium-sensing receptor [Homo sapiens] 37 0.028
gi|110611176 glutamate receptor, metabotropic 6 precursor [Homo ... 37 0.037
gi|4504141 glutamate receptor, metabotropic 4 [Homo sapiens] 35 0.14
gi|209413763 hypothetical protein LOC11094 isoform b [Homo sapiens] 34 0.24
gi|169171487 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|169171950 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|169171214 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|239509026 PREDICTED: hypothetical protein [Homo sapiens] 34 0.31
gi|50233858 olfactory receptor, family 2, subfamily T, member 11... 30 3.4
gi|38505226 E2F family member 8 [Homo sapiens] 30 4.5
gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo sapi... 29 7.7
gi|40217788 Bardet-Biedl syndrome 12 [Homo sapiens] 29 7.7
>gi|40217833 G protein-coupled receptor family C, group 5, member C
isoform b [Homo sapiens]
Length = 453
Score = 925 bits (2391), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MGTQPEPGLGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGA 60
MGTQPEPGLGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGA
Sbjct: 1 MGTQPEPGLGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGA 60
Query: 61 WGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACV 120
WGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACV
Sbjct: 61 WGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACV 120
Query: 121 VKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEV 180
VKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEV
Sbjct: 121 VKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEV 180
Query: 181 IINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAW 240
IINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAW
Sbjct: 181 IINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAW 240
Query: 241 PALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANA 300
PALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANA
Sbjct: 241 PALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANA 300
Query: 301 WAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEP 360
WAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEP
Sbjct: 301 WAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEP 360
Query: 361 VAAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTL 420
VAAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTL
Sbjct: 361 VAAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTL 420
Query: 421 RAEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD 453
RAEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD
Sbjct: 421 RAEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD 453
>gi|40217831 G protein-coupled receptor family C, group 5, member C
isoform a [Homo sapiens]
Length = 486
Score = 923 bits (2386), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 2 GTQPEPGLGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAW 61
GTQPEPGLGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAW
Sbjct: 35 GTQPEPGLGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAW 94
Query: 62 GIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVV 121
GIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVV
Sbjct: 95 GIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVV 154
Query: 122 KPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEVI 181
KPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEVI
Sbjct: 155 KPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEVI 214
Query: 182 INTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWP 241
INTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWP
Sbjct: 215 INTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWP 274
Query: 242 ALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAW 301
ALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAW
Sbjct: 275 ALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAW 334
Query: 302 AFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEPV 361
AFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEPV
Sbjct: 335 AFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEPV 394
Query: 362 AAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTLR 421
AAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTLR
Sbjct: 395 AAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTLR 454
Query: 422 AEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD 453
AEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD
Sbjct: 455 AEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD 486
>gi|7706451 G protein-coupled receptor, family C, group 5, member B
precursor [Homo sapiens]
Length = 403
Score = 275 bits (704), Expect = 5e-74
Identities = 160/395 (40%), Positives = 226/395 (57%), Gaps = 34/395 (8%)
Query: 12 RMAIHKALVMCLGLPLFLFPGAWAQG-HVPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAG 70
+M H+ L L LF+ ++ GC L P Y +LCD WGIV+EAVAG
Sbjct: 8 KMRAHQVLTFLL---LFVITSVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAG 64
Query: 71 AGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVKPDFSTCAS 130
AG + T +L +IL+ LPF+++ +K+S +G FLLGTLGLF L FA +++ D + C+
Sbjct: 65 AGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSV 124
Query: 131 RRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEVIINTEWLIIT 190
RRFL+GVLFA+CFSCL + + + L R GP GW + +AL L LV+VII EWL++T
Sbjct: 125 RRFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLT 184
Query: 191 LVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWPALCGRYKRW 250
++R + CA MDFVMALIY M+LL+ A LCG++KRW
Sbjct: 185 VLRDT---------------RPACAYEPMDFVMALIYDMVLLVVTLGLALFTLCGKFKRW 229
Query: 251 RKHGVFVLLTTATSVAIWVVWIVMYTYGN-KQHNSPTWDDPTLAIALAANAWAFVLFYVI 309
+ +G F+L+T SV IWV W+ MY +GN K W+DPTLAI LAA+ W FV+F+ I
Sbjct: 230 KLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAI 289
Query: 310 PEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQ-KGQSMFVENKAFSMDEPVAAKRPVS 368
PE+ + +++ ++ ET +E + ++ENKAFSMDE AA R
Sbjct: 290 PEIHCTLLPALQENTPNYFDTSQPRMRETAFEEDVQLPRAYMENKAFSMDEHNAALRTAG 349
Query: 369 PYSGYNGQ-------------LLTSVYQPTEMALM 390
+G G+ ++VYQPTEMA++
Sbjct: 350 FPNGSLGKRPSGSLGKRPSAPFRSNVYQPTEMAVV 384
>gi|4506403 G protein-coupled receptor, family C, group 5, member A
[Homo sapiens]
Length = 357
Score = 208 bits (530), Expect = 7e-54
Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 23/322 (7%)
Query: 39 VPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSL 98
VP GC GL YY LCD++ AWGIVLE VA AG+VT+ + L + VQD+ +R +
Sbjct: 5 VPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSNRRKM 64
Query: 99 LGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLAR 158
L TQ FLLG LG+F L FA ++ D ST +R FLFG+LF+ICFSCL AH +L L R
Sbjct: 65 LPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLTKLVR 124
Query: 159 KNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIAN 218
VI +A+ +LV+ +I E++++T+ R N + +++P N
Sbjct: 125 GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNR--------TNVNVFSELSAP--RRN 174
Query: 219 MDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYG 278
DFV+ L YV+ L+ FL + CG + W++HG + LT S+AIWV WI +
Sbjct: 175 EDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLP 234
Query: 279 NKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYET 338
+ WDD L+ ALAAN W F+L YV PE +TK Y + +
Sbjct: 235 DFDRR---WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVE---------DA 282
Query: 339 ILKEQKGQSMF-VENKAFSMDE 359
K Q + + VEN+A+S +E
Sbjct: 283 FCKPQLVKKSYGVENRAYSQEE 304
>gi|8923705 G protein-coupled receptor, family C, group 5, member D
[Homo sapiens]
Length = 345
Score = 198 bits (503), Expect = 1e-50
Identities = 109/296 (36%), Positives = 166/296 (56%), Gaps = 14/296 (4%)
Query: 51 YYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTL 110
Y+ LCD G WGI+LE++A GIV T +L + + + +QD + ++L TQ+ FLL L
Sbjct: 12 YFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCSQWNVLPTQLLFLLSVL 71
Query: 111 GLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFT 170
GLF L FA +++ + T R FLFGVLFA+CFSCL AH L L R I
Sbjct: 72 GLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRGCVSFSWTTILC 131
Query: 171 VALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVML 230
+A+ +L+++II TE++ + + RG + +PC + N+DFV+ L+YV+
Sbjct: 132 IAIGCSLLQIIIATEYVTLIMTRG-----------MMFVNMTPCQL-NVDFVVLLVYVLF 179
Query: 231 LLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQ-HNSPTWDD 289
L+ F + CG + W++HG + +T S+ IWVVWI M GN Q P WDD
Sbjct: 180 LMALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQRQPQWDD 239
Query: 290 PTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQ-SYQGDMYPTRGVGYETILKEQK 344
P + IAL NAW F+L Y++PE+ + +S ++ QG+ P + ++ Q+
Sbjct: 240 PVVCIALVTNAWVFLLLYIVPELCILYRSCRQECPLQGNACPVTAYQHSFQVENQE 295
>gi|66529100 glutamate receptor, metabotropic 2 isoform a precursor
[Homo sapiens]
Length = 872
Score = 49.3 bits (116), Expect = 7e-06
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 39/235 (16%)
Query: 60 AWGIVLEAVAGAG-IVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGL-FCLVF 117
AW + +A G + T FVL + + + V R L + LLG + L +C+ F
Sbjct: 566 AWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGRELC----YILLGGVFLCYCMTF 621
Query: 118 ACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWV--------IF 169
+ KP + C RR G F++C+S L N +AR G R
Sbjct: 622 IFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKT---NRIARIFGGAREGAQRPRFISPAS 678
Query: 170 TVALLLTLV--EVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIY 227
VA+ L L+ +++I WL++ E P+ V C + + +L Y
Sbjct: 679 QVAICLALISGQLLIVVAWLVVEAPGTGKETAPERRE----VVTLRCNHRDASMLGSLAY 734
Query: 228 VMLLLLGAFLGAWPALCGRYK-RWRK------HGVFVLLTTATSVAIWVVWIVMY 275
+LL+ ALC Y + RK F+ T T+ IW+ ++ ++
Sbjct: 735 NVLLI---------ALCTLYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIF 780
>gi|46358417 glutamate receptor, metabotropic 3 precursor [Homo
sapiens]
Length = 879
Score = 46.6 bits (109), Expect = 5e-05
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 40/271 (14%)
Query: 60 AWGIVLEAVAGAGIVTTFVLTIILVA--SLPFVQDTKKRSLLGTQVFFLLGTLGL-FCLV 116
AW I +A G + T ++ + + + P V+ + + + LL +GL +C+
Sbjct: 575 AWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGRELC-----YILLFGVGLSYCMT 629
Query: 117 FACVVKPDFSTCASRRFLFGVLFAICFSCL--AAHVFALNFLARKNHGPRGWVI-----F 169
F + KP CA RR G FAIC+S L + A F KN R I
Sbjct: 630 FFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQRPKFISPSSQV 689
Query: 170 TVALLLTLVEVIINTEWLIITLVRGSGEGGPQGN-SSAGWAVASPCAIANMDFVMALIYV 228
+ L L LV++++ + WLI+ G + + V C + + +++L Y
Sbjct: 690 FICLGLILVQIVMVSVWLIL-----EAPGTRRYTLAEKRETVILKCNVKDSSMLISLTYD 744
Query: 229 MLLLLGAFLGAWPALCGRYK-RWRK------HGVFVLLTTATSVAIWVVWIVMYTYGNKQ 281
++L++ LC Y + RK F+ T T+ IW+ ++ ++ +
Sbjct: 745 VILVI---------LCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSSD 795
Query: 282 HNSPTWDDPTLAIALAANAWAFVLFYVIPEV 312
+ T T+ I+++ + + + P+V
Sbjct: 796 YRVQT---TTMCISVSLSGFVVLGCLFAPKV 823
>gi|166999098 glutamate receptor, metabotropic 1 isoform alpha
precursor [Homo sapiens]
Length = 1194
Score = 42.7 bits (99), Expect = 7e-04
Identities = 77/346 (22%), Positives = 133/346 (38%), Gaps = 43/346 (12%)
Query: 46 GLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVA--SLPFVQDTKKRSLLGTQV 103
G P+ + S I+ A + GI+ T +T+I V P V+ + +
Sbjct: 577 GCEPIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILA 636
Query: 104 FFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLA------AHVFA---LN 154
LG + F + KP ++C +R L G+ A+C+S L A + A
Sbjct: 637 GIFLG----YVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKK 692
Query: 155 FLARKNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPC 214
RK W +A +L V++ L++TL+ P + + V C
Sbjct: 693 ICTRKPRFMSAWAQVIIASILISVQLT-----LVVTLII-MEPPMPILSYPSIKEVYLIC 746
Query: 215 AIANMDFVMALIYVMLLLLGAFLGAW-----PALCGRYKRWRKHGVFVLLTTATSVAIWV 269
+N+ V L Y LL++ A+ PA K ++ T T+ IW+
Sbjct: 747 NTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAK-------YIAFTMYTTCIIWL 799
Query: 270 VWIVMYTYGNKQHNSPTWDDPTLAIALAANAWAFVLFYVI---PE---VSQVTKSSPEQS 323
++ +Y +G+ T +L++ +A Y+I PE S T S +
Sbjct: 800 AFVPIY-FGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRM 858
Query: 324 YQGD-MYPTRGVGYETILKEQKGQSMFVEN--KAFSMDEPVAAKRP 366
+ GD P R + I + +K + + K+ S EP + P
Sbjct: 859 HVGDGKLPCRSNTFLNIFRRKKAGAGNANSNGKSVSWSEPGGGQVP 904
>gi|166999223 glutamate receptor, metabotropic 1 isoform beta
precursor [Homo sapiens]
Length = 906
Score = 41.6 bits (96), Expect = 0.001
Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 41/322 (12%)
Query: 46 GLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVA--SLPFVQDTKKRSLLGTQV 103
G P+ + S I+ A + GI+ T +T+I V P V+ + +
Sbjct: 577 GCEPIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILA 636
Query: 104 FFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLA------AHVFA---LN 154
LG + F + KP ++C +R L G+ A+C+S L A + A
Sbjct: 637 GIFLG----YVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKK 692
Query: 155 FLARKNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPC 214
RK W +A +L V++ L++TL+ P + + V C
Sbjct: 693 ICTRKPRFMSAWAQVIIASILISVQLT-----LVVTLII-MEPPMPILSYPSIKEVYLIC 746
Query: 215 AIANMDFVMALIYVMLLLLGAFLGAW-----PALCGRYKRWRKHGVFVLLTTATSVAIWV 269
+N+ V L Y LL++ A+ PA K ++ T T+ IW+
Sbjct: 747 NTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAK-------YIAFTMYTTCIIWL 799
Query: 270 VWIVMYTYGNKQHNSPTWDDPTLAIALAANAWAFVLFYVI---PE---VSQVTKSSPEQS 323
++ +Y +G+ T +L++ +A Y+I PE S T S +
Sbjct: 800 AFVPIY-FGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRM 858
Query: 324 YQGD-MYPTRGVGYETILKEQK 344
+ GD P R + I + +K
Sbjct: 859 HVGDGKLPCRSNTFLNIFRRKK 880
>gi|112789566 taste receptor, type 1, member 2 [Homo sapiens]
Length = 839
Score = 39.3 bits (90), Expect = 0.007
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 63 IVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVV- 121
I + +A G ++T + +I Q RS G F +L L + +V V
Sbjct: 567 IAVALLAALGFLSTLAILVIFWRHF---QTPIVRSAGGPMCFLMLTLLLVAYMVVPVYVG 623
Query: 122 KPDFSTCASRRFLFGVLFAICFSCLAAHVFAL 153
P STC R+ LF + F IC SC+A F +
Sbjct: 624 PPKVSTCLCRQALFPLCFTICISCIAVRSFQI 655
>gi|194248052 glutamate receptor, metabotropic 2 isoform b [Homo
sapiens]
Length = 254
Score = 38.5 bits (88), Expect = 0.013
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 33/178 (18%)
Query: 115 LVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWV------- 167
+ F + KP + C RR G F++C+S L N +AR G R
Sbjct: 1 MTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKT---NRIARIFGGAREGAQRPRFIS 57
Query: 168 -IFTVALLLTLV--EVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMA 224
VA+ L L+ +++I WL++ E P+ V C + + +
Sbjct: 58 PASQVAICLALISGQLLIVVAWLVVEAPGTGKETAPERRE----VVTLRCNHRDASMLGS 113
Query: 225 LIYVMLLLLGAFLGAWPALCGRYK-RWRK------HGVFVLLTTATSVAIWVVWIVMY 275
L Y +LL+ ALC Y + RK F+ T T+ IW+ ++ ++
Sbjct: 114 LAYNVLLI---------ALCTLYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIF 162
>gi|112807234 G protein-coupled receptor, family C, group 6, member
A [Homo sapiens]
Length = 926
Score = 37.7 bits (86), Expect = 0.022
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 31/230 (13%)
Query: 63 IVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVK 122
I+L ++ GI+ V+ II +L L V L L F
Sbjct: 595 ILLLILSLLGIIFVLVVGIIFTRNLNTPVVKSSGGLRVCYVILLCHFLNFASTSFFIGEP 654
Query: 123 PDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPR-----------GWVIFTV 171
DF TC +R+ +FGV F +C SC+ +L L + P+ +IFT
Sbjct: 655 QDF-TCKTRQTMFGVSFTLCISCILTK--SLKILLAFSFDPKLQKFLKCLYRPILIIFT- 710
Query: 172 ALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIAN-MDFVMALIYVML 230
T ++V+I T WLI + N S + C + + F L Y+ +
Sbjct: 711 ---CTGIQVVICTLWLIFAAPT------VEVNVSLPRVIILECEEGSILAFGTMLGYIAI 761
Query: 231 LLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMY--TYG 278
L F+ A+ G+Y+ + + F+ W+ +I +Y T+G
Sbjct: 762 LAFICFIFAFK---GKYENYNE-AKFITFGMLIYFIAWITFIPIYATTFG 807
>gi|37577159 calcium-sensing receptor [Homo sapiens]
Length = 1078
Score = 37.4 bits (85), Expect = 0.028
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Query: 61 WGIVLEAVAGAGI-VTTFVLTIIL-VASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFA 118
+GI L A GI +T FVL + + + P V+ T + L L F
Sbjct: 612 FGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRE----LSYLLLFSLLCCFSSSLF 667
Query: 119 CVVKPDFSTCASRRFLFGVLFAICFSCLAAHV--FALNFLAR-KNHGPRGW----VIFTV 171
+ +P TC R+ FG+ F +C SC+ L F A+ R W + F +
Sbjct: 668 FIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWGLNLQFLL 727
Query: 172 ALLLTLVEVIINTEWL 187
L T ++++I WL
Sbjct: 728 VFLCTFMQIVICVIWL 743
>gi|110611176 glutamate receptor, metabotropic 6 precursor [Homo
sapiens]
Length = 877
Score = 37.0 bits (84), Expect = 0.037
Identities = 56/273 (20%), Positives = 113/273 (41%), Gaps = 21/273 (7%)
Query: 64 VLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVKP 123
+L AV G TT V T + + P V+ + + L G ++ + F V +P
Sbjct: 590 LLLAVLGIVATTTVVATFVRYNNTPIVRASGRE----LSYVLLTGIFLIYAITFLMVAEP 645
Query: 124 DFSTCASRRFLFGVLFAICFSCLAA---HVFALNFLARKNHGPRGWVIFTVALL----LT 176
+ CA+RR G+ + +S L ++ + +++ P ++ T L+ LT
Sbjct: 646 GAAVCAARRLFLGLGTTLSYSALLTKTNRIYRIFEQGKRSVTPPPFISPTSQLVITFSLT 705
Query: 177 LVEVIINTEWLIITLVRGSGEGGPQGNSSAGWA-VASPCAIANMDFVMALIYVMLLLLGA 235
++V+ WL + Q A C ++++ + L Y +LL++
Sbjct: 706 SLQVVGMIAWLGARPPHSVIDYEEQRTVDPEQARGVLKCDMSDLSLIGCLGYSLLLMVTC 765
Query: 236 FLGAWPA--LCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTW-DDPTL 292
+ A A + + + G T T+ IW+ ++ ++ +G Q + TL
Sbjct: 766 TVYAIKARGVPETFNEAKPIG----FTMYTTCIIWLAFVPIF-FGTAQSAEKIYIQTTTL 820
Query: 293 AIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQ 325
++L+ +A + +P+ + V PEQ+ Q
Sbjct: 821 TVSLSLSASVSLGMLYVPK-TYVILFHPEQNVQ 852
>gi|4504141 glutamate receptor, metabotropic 4 [Homo sapiens]
Length = 912
Score = 35.0 bits (79), Expect = 0.14
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 46 GLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFF 105
G P+ + W ++ +A GI T + I V DT G ++ +
Sbjct: 572 GCRPIPIIKLEWGSPWAVLPLFLAVVGIAATLFVVITFVR----YNDTPIVKASGRELSY 627
Query: 106 LL--GTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCL 146
+L G + F + +PD TC+ RR G+ +I ++ L
Sbjct: 628 VLLAGIFLCYATTFLMIAEPDLGTCSLRRIFLGLGMSISYAAL 670
>gi|209413763 hypothetical protein LOC11094 isoform b [Homo sapiens]
Length = 130
Score = 34.3 bits (77), Expect = 0.24
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 31 PGAWAQGHVPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGA-GIVTTFVLTI-----ILV 84
PGA A PP +G+ Y LC SG G V A++G +T L I +++
Sbjct: 8 PGASASS-APPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMMM 66
Query: 85 ASLPFVQDTKKRSLLGTQVFFLLGTL 110
A +P V +LLG + F G L
Sbjct: 67 AVVPIVISLTLTTLLGNAIAFATGVL 92
>gi|169171487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 313 SQVTKSSPEQSYQGDMYP----TRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVS 368
S+V PE +Q +MYP TR + YE I + +G+ ++ + M E P++
Sbjct: 73 SKVPSPVPEAPFQSEMYPVPPITRALLYEGISHDFQGRYRYLNTRKLDMPE-TRYLFPIT 131
Query: 369 PYSGYNGQLLTSVYQPTEMALMHKVPS----EGAYDIILPRATA 408
Y QL V Q M ++ S GA+ ++ PR A
Sbjct: 132 TSFTYGWQLGPPVKQELVSCKMCRIESFFRKNGAFALLDPRDLA 175
>gi|169171950 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 313 SQVTKSSPEQSYQGDMYP----TRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVS 368
S+V PE +Q +MYP TR + YE I + +G+ ++ + M E P++
Sbjct: 73 SKVPSPVPEAPFQSEMYPVPPITRALLYEGISHDFQGRYRYLNTRKLDMPE-TRYLFPIT 131
Query: 369 PYSGYNGQLLTSVYQPTEMALMHKVPS----EGAYDIILPRATA 408
Y QL V Q M ++ S GA+ ++ PR A
Sbjct: 132 TSFTYGWQLGPPVKQELVSCKMCRIESFFRKNGAFALLDPRDLA 175
>gi|169171214 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 313 SQVTKSSPEQSYQGDMYP----TRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVS 368
S+V PE +Q +MYP TR + YE I + +G+ ++ + M E P++
Sbjct: 73 SKVPSPVPEAPFQSEMYPVPPITRALLYEGISHDFQGRYRYLNTRKLDMPE-TRYLFPIT 131
Query: 369 PYSGYNGQLLTSVYQPTEMALMHKVPS----EGAYDIILPRATA 408
Y QL V Q M ++ S GA+ ++ PR A
Sbjct: 132 TSFTYGWQLGPPVKQELVSCKMCRIESFFRKNGAFALLDPRDLA 175
>gi|239509026 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 313 SQVTKSSPEQSYQGDMYP----TRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVS 368
S+V PE +Q +MYP TR + YE I + +G+ ++ + M E P++
Sbjct: 73 SKVPSPVPEAPFQSEMYPVPPITRALLYEGISHDFQGRYRYLNTRKLDMPE-TRYLFPIT 131
Query: 369 PYSGYNGQLLTSVYQPTEMALMHKVPS----EGAYDIILPRATA 408
Y QL V Q M ++ S GA+ ++ PR A
Sbjct: 132 TSFTYGWQLGPPVKQELVSCKMCRIESFFRKNGAFALLDPRDLA 175
>gi|50233858 olfactory receptor, family 2, subfamily T, member 11
[Homo sapiens]
Length = 316
Score = 30.4 bits (67), Expect = 3.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 62 GIVLEAVAGAGIVTTFVLTIIL---VASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFA 118
G+++ + A AGIV T +L + L A+L + + S L T ++FLL L + +F
Sbjct: 13 GLLVNSEA-AGIVFTVILAVFLGAVTANLVMIFLIQVDSRLHTPMYFLLSQLSIMDTLFI 71
Query: 119 CVVKP 123
C P
Sbjct: 72 CTTVP 76
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 30.0 bits (66), Expect = 4.5
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 313 SQVTKSSPEQSYQGDMYPTRGVGYETI----LKEQKGQSMFVENKAFSMDEPVAAKRPVS 368
S + + E S +P++ I L+EQ +S + P P+
Sbjct: 417 SPIKTNKAESSQNSAPFPSKMAQLAAICKMQLEEQSSESRQKVKVQLARSGPCKPVAPLD 476
Query: 369 PYSGYNGQLLT-SVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTLRAEDMYS 427
P +L S+ QP M + P A +ILP+A + A +
Sbjct: 477 PPVNAEMELTAPSLIQPLGMVPLIPSPLSSAVPLILPQAPSGPSY---------AIYLQP 527
Query: 428 AQSHQAATPPK 438
Q+HQ+ TPP+
Sbjct: 528 TQAHQSVTPPQ 538
>gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo
sapiens]
Length = 440
Score = 29.3 bits (64), Expect = 7.7
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 197 EGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVF 256
E GP NS+ W P A +V A + V++ L A AL R F
Sbjct: 4 EPGPTANSTPAWGAGPPSAPGGSGWVAAALCVVIALTAAANSLLIALICTQPALRNTSNF 63
Query: 257 VLLTTATS 264
L++ TS
Sbjct: 64 FLVSLFTS 71
>gi|40217788 Bardet-Biedl syndrome 12 [Homo sapiens]
Length = 710
Score = 29.3 bits (64), Expect = 7.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 121 VKPD-FSTCASRRFLF----------GVLFAICFSCLAAHVFALNFLARKNHGPRGWVIF 169
+K D F TCA R + G + +C SCL H+ A L ++NH GW+
Sbjct: 514 IKEDRFWTCAYRLYYALKEEKVFLGGGAVEFLCLSCL--HILAEQSLKKENHACSGWLHN 571
Query: 170 TVALLLTLVEV 180
T + L + + +
Sbjct: 572 TSSWLASSLAI 582
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,995,469
Number of Sequences: 37866
Number of extensions: 795208
Number of successful extensions: 2475
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2449
Number of HSP's gapped (non-prelim): 26
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.