Guide to the Human Genome
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Name: CRBN Sequence: fasta or formatted (442aa) NCBI GI: 39545580
Description:

cereblon

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         27           2
 C cysteine            3.6         16           2
 D aspartate           6.1         27           3
 E glutamate           7.5         33           3
 F phenylalanine       3.2         14           1
 G glycine             3.8         17           1
 H histidine           2.5         11           1
 I isoleucine          6.3         28           2
 K lysine              6.3         28           2
 L leucine             9.7         43           2
 M methionine          2.7         12           2
 N asparagine          3.4         15           1
 P proline             5.7         25           1
 Q glutamine           6.6         29           2
 R arginine            4.3         19           1
 S serine              6.6         29           1
 T threonine           5.7         25           2
 V valine              5.0         22           1
 W tryptophan          2.0          9           2
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cereblon 
ZDBF2                 0.021   zinc finger, DBF-type containing 2 
TP53BP2               0.010   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.010   tumor protein p53 binding protein, 2 isoform 2 
LONRF1                0.010   LON peptidase N-terminal domain and ring finger 1 [H...
HOOK3                 0.010   golgi-associated microtubule-binding protein HOOK3 [...
ZBTB40                0.007   zinc finger and BTB domain containing 40 
ZBTB40                0.007   zinc finger and BTB domain containing 40 
TAF3                  0.006   RNA polymerase II transcription factor TAFII140 [Ho...
IWS1                  0.006   IWS1 homolog 
ITGB8                 0.006   integrin, beta 8 precursor 
LOC100291612          0.006   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100292459          0.006   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100290560          0.006   PREDICTED: hypothetical protein XP_002348294 
LOC100290997          0.006   PREDICTED: hypothetical protein XP_002346467 
LOC100287647          0.006   PREDICTED: hypothetical protein XP_002343514 
NCOR2                 0.006   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.006   nuclear receptor co-repressor 2 isoform 1 
PAK3                  0.006   p21-activated kinase 3 isoform d 
PAK3                  0.006   p21-activated kinase 3 isoform c 
PAK3                  0.006   p21-activated kinase 3 isoform b 
PAK3                  0.006   p21-activated kinase 3 isoform a 
PAK3                  0.006   p21-activated kinase 3 isoform a 
PAK3                  0.006   p21-activated kinase 3 isoform a 
HRC                   0.006   histidine rich calcium binding protein precursor [Hom...
MEA1                  0.006   male-enhanced antigen 
BMP2K                 0.004   BMP-2 inducible kinase isoform a 
RYR1                  0.004   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.004   skeletal muscle ryanodine receptor isoform 1 
HAP1                  0.004   huntingtin-associated protein 1 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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