Guide to the Human Genome
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Name: RNASE3 Sequence: fasta or formatted (160aa) NCBI GI: 45243507
Description:

ribonuclease, RNase A family, 3 (eosinophil cationic protein)

Referenced in:

Neutrophils, Eosinophils, and Basophils
RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          9           1
 C cysteine            5.6          9           1
 D aspartate           3.8          6           1
 E glutamate           0.6          1           1
 F phenylalanine       4.4          7           1
 G glycine             3.8          6           1
 H histidine           3.8          6           1
 I isoleucine          5.6          9           1
 K lysine              1.2          2           1
 L leucine             9.4         15           5
 M methionine          1.9          3           1
 N asparagine          9.4         15           2
 P proline             8.1         13           2
 Q glutamine           4.4          7           1
 R arginine           11.2         18           2
 S serine              4.4          7           1
 T threonine           6.2         10           2
 V valine              6.9         11           2
 W tryptophan          1.2          2           1
 Y tyrosine            2.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease, RNase A family, 3 (eosinophil cationic... 
RNASE2                0.668   ribonuclease, RNase A family, 2 (liver, eosinophil-de...
RNASE6                0.282   ribonuclease, RNase A family, k6 
RNASE7                0.260   ribonuclease, RNase A family, 7 
RNASE8                0.248   ribonuclease, RNase A family, 8 
RNASE1                0.138   pancreatic ribonuclease precursor 
RNASE1                0.138   pancreatic ribonuclease precursor 
RNASE1                0.138   pancreatic ribonuclease precursor 
RNASE1                0.138   pancreatic ribonuclease precursor 
RNASE4                0.100   ribonuclease, RNase A family, 4 precursor 
RNASE4                0.100   ribonuclease, RNase A family, 4 precursor 
ANG                   0.038   angiogenin, ribonuclease, RNase A family, 5 precurs...
ANG                   0.038   angiogenin, ribonuclease, RNase A family, 5 precursor...
RNASE12               0.019   ribonuclease, RNase A family, 12 (non-active) 
SH3RF3                0.006   SH3 domain containing ring finger 3 
PLXNB2                0.006   plexin B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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