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Search of human proteins with 38201667
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38201667 inhibitor of growth family, member 1 isoform A
[Homo sapiens]
(279 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38201667 inhibitor of growth family, member 1 isoform A [Homo... 574 e-164
gi|38201663 inhibitor of growth family, member 1 isoform C [Homo... 486 e-138
gi|38201661 inhibitor of growth family, member 1 isoform D [Homo... 486 e-138
gi|38201665 inhibitor of growth family, member 1 isoform B [Homo... 438 e-123
gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] 330 1e-90
gi|189083821 inhibitor of growth family, member 4 isoform 9 [Hom... 191 6e-49
gi|189083826 inhibitor of growth family, member 4 isoform 3 [Hom... 190 1e-48
gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo... 190 1e-48
gi|189083828 inhibitor of growth family, member 4 isoform 4 [Hom... 189 2e-48
gi|18644730 inhibitor of growth family, member 5 [Homo sapiens] 180 1e-45
gi|189083830 inhibitor of growth family, member 4 isoform 5 [Hom... 152 3e-37
gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo... 119 3e-27
gi|189083832 inhibitor of growth family, member 4 isoform 6 [Hom... 87 1e-17
gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo... 52 8e-07
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 52 8e-07
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens] 51 1e-06
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens] 51 1e-06
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 50 3e-06
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 47 2e-05
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 47 2e-05
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 47 2e-05
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 47 2e-05
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 47 2e-05
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 47 2e-05
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 46 4e-05
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 45 5e-05
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 45 7e-05
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 45 7e-05
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 45 7e-05
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 44 2e-04
>gi|38201667 inhibitor of growth family, member 1 isoform A [Homo
sapiens]
Length = 279
Score = 574 bits (1480), Expect = e-164
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 1 MLSPANGEQLHLVNYVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERFSR 60
MLSPANGEQLHLVNYVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERFSR
Sbjct: 1 MLSPANGEQLHLVNYVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERFSR 60
Query: 61 ETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELG 120
ETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELG
Sbjct: 61 ETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELG 120
Query: 121 DTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKK 180
DTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKK
Sbjct: 121 DTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKK 180
Query: 181 AKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSC 240
AKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSC
Sbjct: 181 AKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSC 240
Query: 241 VGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR 279
VGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
Sbjct: 241 VGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR 279
>gi|38201663 inhibitor of growth family, member 1 isoform C [Homo
sapiens]
Length = 235
Score = 486 bits (1251), Expect = e-138
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 46 EILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQ 105
EILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQ
Sbjct: 2 EILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQ 61
Query: 106 VDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSN 165
VDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSN
Sbjct: 62 VDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSN 121
Query: 166 HDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIG 225
HDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIG
Sbjct: 122 HDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIG 181
Query: 226 CDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR 279
CDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
Sbjct: 182 CDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR 235
>gi|38201661 inhibitor of growth family, member 1 isoform D [Homo
sapiens]
Length = 422
Score = 486 bits (1251), Expect = e-138
Identities = 233/236 (98%), Positives = 236/236 (100%)
Query: 44 YQEILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRT 103
+++ILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRT
Sbjct: 187 WKQILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRT 246
Query: 104 RQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENAS 163
RQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENAS
Sbjct: 247 RQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENAS 306
Query: 164 SNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEM 223
SNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEM
Sbjct: 307 SNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEM 366
Query: 224 IGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR 279
IGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
Sbjct: 367 IGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR 422
>gi|38201665 inhibitor of growth family, member 1 isoform B [Homo
sapiens]
Length = 210
Score = 438 bits (1126), Expect = e-123
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 70 MLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKA 129
MLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKA
Sbjct: 1 MLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKA 60
Query: 130 GADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKR 189
GADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKR
Sbjct: 61 GADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKR 120
Query: 190 SKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
SKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG
Sbjct: 121 SKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 180
Query: 250 KWYCPKCRGENEKTMDKALEKSKKERAYNR 279
KWYCPKCRGENEKTMDKALEKSKKERAYNR
Sbjct: 181 KWYCPKCRGENEKTMDKALEKSKKERAYNR 210
>gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
Length = 280
Score = 330 bits (845), Expect = 1e-90
Identities = 160/270 (59%), Positives = 206/270 (76%), Gaps = 11/270 (4%)
Query: 7 GEQLHLVN-YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERFSRETDGA 65
GE+ L+ YV+DYL+ +ESLP D+QRNVS++RE+D KYQE LKE+D+ YE++ +E D
Sbjct: 18 GERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDLN 77
Query: 66 QKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGN 125
QK+R+ +QRALI SQELGDEKIQIV+QM+ELVENR RQ++ H + F+ E + A +
Sbjct: 78 QKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAE-SERASD 136
Query: 126 SGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSK 185
K + +P+ +S+R RRQR +E+R+ + +D PKEKK+K++K
Sbjct: 137 KAKMDSSQPER---------SSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAK 187
Query: 186 KKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNH 245
KKKRSKAK EREASP + IDPNEPTYCLCNQVSYGEMIGCDN++CPIEWFHFSCV L +
Sbjct: 188 KKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTY 247
Query: 246 KPKGKWYCPKCRGENEKTMDKALEKSKKER 275
KPKGKWYCPKCRG+NEKTMDK+ EK+KK+R
Sbjct: 248 KPKGKWYCPKCRGDNEKTMDKSTEKTKKDR 277
>gi|189083821 inhibitor of growth family, member 4 isoform 9 [Homo
sapiens]
Length = 249
Score = 191 bits (485), Expect = 6e-49
Identities = 99/253 (39%), Positives = 148/253 (58%), Gaps = 15/253 (5%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y +R +K +L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
+Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA +L + S +
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEA--DLKEKQIESSDYDS 123
Query: 132 DRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSK 191
KG+ + K K++ R R+ N D + + K K +TS +
Sbjct: 124 SSSKGKKKGRTQK--EKKAARARSK------GKNSDEEAPKTAQKKLKLVRTSPEYGMPS 175
Query: 192 AK--AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+G
Sbjct: 176 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 235
Query: 250 KWYCPKCRGENEK 262
KW+CP+C E +K
Sbjct: 236 KWFCPRCSQERKK 248
>gi|189083826 inhibitor of growth family, member 4 isoform 3 [Homo
sapiens]
Length = 246
Score = 190 bits (483), Expect = 1e-48
Identities = 98/255 (38%), Positives = 147/255 (57%), Gaps = 22/255 (8%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y +R +K +L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
+Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADL-------------- 111
Query: 132 DRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKK--AKTSKKKKR 189
+ K ++ D +SK R Q+ + S + D+ A T ++K +TS +
Sbjct: 112 -KEKQIESSDYDSSSSKEGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGM 170
Query: 190 SKAK--AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKP 247
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP
Sbjct: 171 PSVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKP 230
Query: 248 KGKWYCPKCRGENEK 262
+GKW+CP+C E +K
Sbjct: 231 RGKWFCPRCSQERKK 245
>gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo
sapiens]
Length = 248
Score = 190 bits (483), Expect = 1e-48
Identities = 96/253 (37%), Positives = 148/253 (58%), Gaps = 16/253 (6%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y +R +K +L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
+Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA +L + S +
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEA--DLKEKQIESSDYDS 123
Query: 132 DRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSK 191
KG+ + R+++++ + N D + + K K +TS +
Sbjct: 124 SSSKGKKS---------RTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPS 174
Query: 192 AK--AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+G
Sbjct: 175 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 234
Query: 250 KWYCPKCRGENEK 262
KW+CP+C E +K
Sbjct: 235 KWFCPRCSQERKK 247
>gi|189083828 inhibitor of growth family, member 4 isoform 4 [Homo
sapiens]
Length = 245
Score = 189 bits (480), Expect = 2e-48
Identities = 96/254 (37%), Positives = 147/254 (57%), Gaps = 21/254 (8%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y +R +K +L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
+Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADL-------------- 111
Query: 132 DRPKGEAAAQADKPNSK-RSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRS 190
+ K ++ D +SK R+++++ + N D + + K K +TS +
Sbjct: 112 -KEKQIESSDYDSSSSKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMP 170
Query: 191 KAK--AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPK 248
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+
Sbjct: 171 SVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPR 230
Query: 249 GKWYCPKCRGENEK 262
GKW+CP+C E +K
Sbjct: 231 GKWFCPRCSQERKK 244
>gi|18644730 inhibitor of growth family, member 5 [Homo sapiens]
Length = 240
Score = 180 bits (457), Expect = 1e-45
Identities = 99/254 (38%), Positives = 141/254 (55%), Gaps = 27/254 (10%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Y+E YLDSIE+LP +LQRN LMRE+D + ++ E+D Y + Q+ L
Sbjct: 6 YLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVERL 65
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQE---LGDTAGNSGK 128
+Q A + +E D+K+Q+ Q E+V+ R++D+ + FEA + G +SG
Sbjct: 66 QKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSGG 125
Query: 129 AGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKK 188
G + +G+ + +R + R +S D TPK+KK K +
Sbjct: 126 RGLKKGRGQ-------------KEKRGSRGRGRRTSEED-------TPKKKKHKGGSEFT 165
Query: 189 RSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPK 248
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +CPIEWFHF+CV L KPK
Sbjct: 166 DTILSVH-PSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPK 224
Query: 249 GKWYCPKCRGENEK 262
GKW+CP+C E K
Sbjct: 225 GKWFCPRCVQEKRK 238
>gi|189083830 inhibitor of growth family, member 4 isoform 5 [Homo
sapiens]
Length = 225
Score = 152 bits (384), Expect = 3e-37
Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 33/250 (13%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERFSRETDGAQKRRMLHCV 74
Y+E YLD++++ EID E Y +R +K +L +
Sbjct: 6 YLEHYLDNLKA-------------EIDKLATE--------YMSSARSLSSEEKLALLKQI 44
Query: 75 QRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRP 134
Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA +L + S +
Sbjct: 45 QEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEA--DLKEKQIESSDYDSSSS 102
Query: 135 KGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAK- 193
KG+ + K K++ R R+ N D + + K K +TS +
Sbjct: 103 KGKKKGRTQK--EKKAARARSK------GKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTF 154
Query: 194 -AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY 252
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+GKW+
Sbjct: 155 GSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWF 214
Query: 253 CPKCRGENEK 262
CP+C E +K
Sbjct: 215 CPRCSQERKK 224
>gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo
sapiens]
Length = 418
Score = 119 bits (298), Expect = 3e-27
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 87 EKIQIVSQMVELVENRTRQVDSHVELFEAQQ-ELG-------DTAGNSGKAGADRPKGEA 138
+ +Q +QM E RT + + E F+ +LG +T G S + +
Sbjct: 231 QAVQATAQMKE--GRRTSSLKASYEAFKNNDFQLGKEFSMARETVGYSSSSALMTTLTQN 288
Query: 139 AAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREA 198
A+ + + + + NN++ SS+ S ++ +
Sbjct: 289 ASSSAADSRSGRKSKNNNKSSSQQSSSSSSSSSLSSCSSSSTVVQEISQQTTVVPESDSN 348
Query: 199 SPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 256
S D DPNEP YC+CNQVSYGEM+GCDN +CPIEWFH+ CVGL PKGKWYCP+C
Sbjct: 349 SQVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQC 406
Score = 63.9 bits (154), Expect = 1e-10
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERF---SRETDGAQKRRML 71
Y+EDYL+ IE LP DL+ + MRE+D + Q + +L++ F +++ + +
Sbjct: 3 YLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQM 62
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
+++ ++ E DEK+Q+ +Q+ +LV+ R++D + F+ + E D AG +
Sbjct: 63 ASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELE-ADNAGIT--EIL 119
Query: 132 DRPKGEAAAQADKPNSKRSRRQRNNENRE-NASSNHDHDDGASGTPKEKKAKTSKKKKRS 190
+R E + N+ + E R+ N +S+H D EKK K+
Sbjct: 120 ERRSLELDTPSQPVNNHHAHSHTPVEKRKYNPTSHHTTTDHI----PEKKFKSEALLSTL 175
Query: 191 KAKAERE 197
+ A +E
Sbjct: 176 TSDASKE 182
>gi|189083832 inhibitor of growth family, member 4 isoform 6 [Homo
sapiens]
Length = 179
Score = 87.4 bits (215), Expect = 1e-17
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y +R +K +L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
+Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA + + + +
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSDYDSSS 125
Query: 132 DRPKGEAAAQADKPNSKRSRRQRNNENRE 160
+ K + Q +K + R+R + N + E
Sbjct: 126 SKGKKKGRTQKEK-KAARARSKGKNSDEE 153
>gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo
sapiens]
Length = 92
Score = 51.6 bits (122), Expect = 8e-07
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERF---SRETDGAQKRRML 71
Y+EDYL+ IE LP DL+ + MRE+D + Q + +L++ F +++ + +
Sbjct: 3 YLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQM 62
Query: 72 HCVQRALIRSQELGDEKIQIVSQMVEL 98
+++ ++ E DEK+Q+ +Q+ +L
Sbjct: 63 ASIKKDYYKALEDADEKVQLANQIYDL 89
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 51.6 bits (122), Expect = 8e-07
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 43/199 (21%)
Query: 89 IQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAA-QADKPNS 147
+ +V MV E V + +A+ + G G +PKG A KP
Sbjct: 234 VAVVESMVTATEVAPPPPPVEVPIRKAKTKEG-----KGPNARRKPKGSPRVPDAKKPKP 288
Query: 148 KR------------SRRQRNNENRENASSNHDHDDGA------------SGTPKEKKAKT 183
K+ S+R+R++ ++ D DD + + KK +T
Sbjct: 289 KKVAPLKIKLGGFGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRT 348
Query: 184 SKKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYGEMIGCDNDECPIEWFHFSCVG 242
+KKKK K E E + D + + YC +C Q GE+I CD CP +H C+
Sbjct: 349 TKKKK----KGEEEVTAVD-GYETDHQDYCEVCQQG--GEIILCDT--CP-RAYHMVCLD 398
Query: 243 --LNHKPKGKWYCPKCRGE 259
+ P+GKW CP C E
Sbjct: 399 PDMEKAPEGKWSCPHCEKE 417
Score = 32.7 bits (73), Expect = 0.36
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 221 GEMIGCDNDECPIEWFHFSCVG--LNHKPKGKWYCPKC 256
GE++ CD CP +H C+ L P G+W CP+C
Sbjct: 459 GELLCCDT--CPSS-YHIHCLNPPLPEIPNGEWLCPRC 493
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
Query: 145 PNSKRSRRQRNNENRENASSNHD---------------HDDGASGTPKEKKAKT--SKKK 187
P SKR +++R R+ S+ + +G+ TP +KK K KK+
Sbjct: 66 PKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKE 125
Query: 188 KRSKAKAEREASPADLPIDPNEP 210
K+SK+K + E D D EP
Sbjct: 126 KKSKSKRKEEEEEEDDDDDSKEP 148
>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
Length = 660
Score = 50.8 bits (120), Expect = 1e-06
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 208 NEPTYCLCNQVSYG-EMIGCDNDECPIEWFHFSCVGLNHKPKG---KWYCPKCRGENEKT 263
N P YC+C + MIGCDN EWFH C+ + K +WYC +CR ++ K
Sbjct: 24 NAPIYCICRKPDINCFMIGCDNCN---EWFHGDCIRITEKMAKAIREWYCRECREKDPKL 80
Query: 264 MDKALEKSKKERAYN 278
+ K +ER N
Sbjct: 81 EIRYRHKKSRERDGN 95
>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
Length = 656
Score = 50.8 bits (120), Expect = 1e-06
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 208 NEPTYCLCNQVSYG-EMIGCDNDECPIEWFHFSCVGLNHKPKG---KWYCPKCRGENEKT 263
N P YC+C + MIGCDN EWFH C+ + K +WYC +CR ++ K
Sbjct: 24 NAPIYCICRKPDINCFMIGCDNCN---EWFHGDCIRITEKMAKAIREWYCRECREKDPKL 80
Query: 264 MDKALEKSKKERAYN 278
+ K +ER N
Sbjct: 81 EIRYRHKKSRERDGN 95
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 49.7 bits (117), Expect = 3e-06
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 172 ASGTPKEKKAKTSK-KKKRSKAKAEREASPADLPIDPNEPTYCL-CNQVSYGEMIGCDND 229
A + E+KAK +K K+KR K K E + D YC C GE++ CD
Sbjct: 1291 ACASTNEEKAKNAKLKQKRRKIKTEPKQMHED---------YCFQCGDG--GELVMCDKK 1339
Query: 230 ECPIEWFHFSCVGLNHKPKGKWYCP 254
+CP + +H C+ L P GKW CP
Sbjct: 1340 DCP-KAYHLLCLNLTQPPYGKWECP 1363
Score = 35.8 bits (81), Expect = 0.043
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 144 KPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADL 203
KP KRSR + E +S+ D D S + + K+ A A+ + S
Sbjct: 628 KPLKKRSRASTDVEM--TSSAYRDTSDSDSRGLSDLQVGFGKQVDSPSATADADVSDVQ- 684
Query: 204 PIDPN----------EPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYC 253
+D + + T C + S +I C+ + C + FH C+GL P K+ C
Sbjct: 685 SMDSSLSRRGTGMSKKDTVCQICESSGDSLIPCEGECC--KHFHLECLGLASLPDSKFIC 742
Query: 254 PKCR 257
+C+
Sbjct: 743 MECK 746
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 177 KEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWF 236
+EK KT KK +R +AK E + D E C G+++ CD C + +
Sbjct: 1215 EEKGKKTKKKTRRRRAKGEGKRQSED------ECFRC----GDGGQLVLCDRKFCT-KAY 1263
Query: 237 HFSCVGLNHKPKGKWYCP 254
H SC+GL +P GKW CP
Sbjct: 1264 HLSCLGLGKRPFGKWECP 1281
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 97 ELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRP-----KGEAAAQADKPNSKRSR 151
+ + ++T + S+ + EA L A + A +P + AA + SK S
Sbjct: 560 DTITDKTARTSSY-KAMEAASSLKSQAATKNLSDACKPLKKRNRASTAASSALGFSKSSS 618
Query: 152 RQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPT 211
+ E + S D S +P E +T + S K+ER + E
Sbjct: 619 PSASLTENEVSDSPGDEP---SESPYESADETQTEVSVSSKKSERGVTAK------KEYV 669
Query: 212 YCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 256
LC + G ++ C+ C FH +C+GL+ +P+G++ C +C
Sbjct: 670 CQLCEKP--GSLLLCEGPCCGA--FHLACLGLSRRPEGRFTCSEC 710
Score = 28.9 bits (63), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 221 GEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCR 257
G ++ C++ CP FH C+ + P G W+C CR
Sbjct: 841 GSLLCCES--CPAA-FHPDCLNIE-MPDGSWFCNDCR 873
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 177 KEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWF 236
+EK KT KK +R +AK E + D E C G+++ CD C + +
Sbjct: 1215 EEKGKKTKKKTRRRRAKGEGKRQSED------ECFRC----GDGGQLVLCDRKFCT-KAY 1263
Query: 237 HFSCVGLNHKPKGKWYCP 254
H SC+GL +P GKW CP
Sbjct: 1264 HLSCLGLGKRPFGKWECP 1281
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 97 ELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRP-----KGEAAAQADKPNSKRSR 151
+ + ++T + S+ + EA L A + A +P + AA + SK S
Sbjct: 560 DTITDKTARTSSY-KAMEAASSLKSQAATKNLSDACKPLKKRNRASTAASSALGFSKSSS 618
Query: 152 RQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPT 211
+ E + S D S +P E +T + S K+ER + E
Sbjct: 619 PSASLTENEVSDSPGDEP---SESPYESADETQTEVSVSSKKSERGVTAK------KEYV 669
Query: 212 YCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 256
LC + G ++ C+ C FH +C+GL+ +P+G++ C +C
Sbjct: 670 CQLCEKP--GSLLLCEGPCCGA--FHLACLGLSRRPEGRFTCSEC 710
Score = 28.9 bits (63), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 221 GEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCR 257
G ++ C++ CP FH C+ + P G W+C CR
Sbjct: 841 GSLLCCES--CPAA-FHPDCLNIE-MPDGSWFCNDCR 873
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 177 KEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWF 236
+EK KT KK +R +AK E + D E C G+++ CD C + +
Sbjct: 1215 EEKGKKTKKKTRRRRAKGEGKRQSED------ECFRC----GDGGQLVLCDRKFCT-KAY 1263
Query: 237 HFSCVGLNHKPKGKWYCP 254
H SC+GL +P GKW CP
Sbjct: 1264 HLSCLGLGKRPFGKWECP 1281
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 97 ELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRP-----KGEAAAQADKPNSKRSR 151
+ + ++T + S+ + EA L A + A +P + AA + SK S
Sbjct: 560 DTITDKTARTSSY-KAMEAASSLKSQAATKNLSDACKPLKKRNRASTAASSALGFSKSSS 618
Query: 152 RQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPT 211
+ E + S D S +P E +T + S K+ER + E
Sbjct: 619 PSASLTENEVSDSPGDEP---SESPYESADETQTEVSVSSKKSERGVTAK------KEYV 669
Query: 212 YCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 256
LC + G ++ C+ C FH +C+GL+ +P+G++ C +C
Sbjct: 670 CQLCEKP--GSLLLCEGPCCGA--FHLACLGLSRRPEGRFTCSEC 710
Score = 28.9 bits (63), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 221 GEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCR 257
G ++ C++ CP FH C+ + P G W+C CR
Sbjct: 841 GSLLCCES--CPAA-FHPDCLNIE-MPDGSWFCNDCR 873
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 47.0 bits (110), Expect = 2e-05
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 177 KEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWF 236
+EK KT KK +R +AK E + D E C G+++ CD C + +
Sbjct: 1215 EEKGKKTKKKTRRRRAKGEGKRQSED------ECFRC----GDGGQLVLCDRKFCT-KAY 1263
Query: 237 HFSCVGLNHKPKGKWYCP 254
H SC+GL +P GKW CP
Sbjct: 1264 HLSCLGLGKRPFGKWECP 1281
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 97 ELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRP-----KGEAAAQADKPNSKRSR 151
+ + ++T + S+ + EA L A + A +P + AA + SK S
Sbjct: 560 DTITDKTARTSSY-KAMEAASSLKSQAATKNLSDACKPLKKRNRASTAASSALGFSKSSS 618
Query: 152 RQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPT 211
+ E + S D S +P E +T + S K+ER + E
Sbjct: 619 PSASLTENEVSDSPGDEP---SESPYESADETQTEVSVSSKKSERGVTAK------KEYV 669
Query: 212 YCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKC 256
LC + G ++ C+ C FH +C+GL+ +P+G++ C +C
Sbjct: 670 CQLCEKP--GSLLLCEGPCCGA--FHLACLGLSRRPEGRFTCSEC 710
Score = 28.9 bits (63), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 221 GEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCR 257
G ++ C++ CP FH C+ + P G W+C CR
Sbjct: 841 GSLLCCES--CPAA-FHPDCLNIE-MPDGSWFCNDCR 873
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 47.0 bits (110), Expect = 2e-05
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 22/143 (15%)
Query: 143 DKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAK---TSKKKKRSKA------- 192
D +++R+ ++R + ++S+ H D ++ K+KK S K++S+
Sbjct: 29 DPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYY 88
Query: 193 -KAEREASPADL-PIDPNEPTYC-LCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
K P D+ P D YC +C++ G+++ C+ CP +H C+ L +P+G
Sbjct: 89 MKQPLTTDPVDVVPQDGRNDFYCWVCHRE--GQVLCCEL--CP-RVYHAKCLRLTSEPEG 143
Query: 250 KWYCPKCR----GENEKTMDKAL 268
W+CP+C E +T KA+
Sbjct: 144 DWFCPECEKITVAECIETQSKAM 166
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 47.0 bits (110), Expect = 2e-05
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 22/143 (15%)
Query: 143 DKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAK---TSKKKKRSKA------- 192
D +++R+ ++R + ++S+ H D ++ K+KK S K++S+
Sbjct: 29 DPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYY 88
Query: 193 -KAEREASPADL-PIDPNEPTYC-LCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
K P D+ P D YC +C++ G+++ C+ CP +H C+ L +P+G
Sbjct: 89 MKQPLTTDPVDVVPQDGRNDFYCWVCHRE--GQVLCCEL--CP-RVYHAKCLRLTSEPEG 143
Query: 250 KWYCPKCR----GENEKTMDKAL 268
W+CP+C E +T KA+
Sbjct: 144 DWFCPECEKITVAECIETQSKAM 166
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 45.8 bits (107), Expect = 4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 215 CNQVSYGE-MIGCDNDECPIEWFHFSCVGLNHKP--KGKWYCPKCRGENEKTMDKALEKS 271
CN+ G MIGCD+ + +W+H+ CVG+ P + +W+CPKC K DK K
Sbjct: 871 CNKPDDGSPMIGCDDCD---DWYHWPCVGIMTAPPEEMQWFCPKCA---NKKKDKK-HKK 923
Query: 272 KKERAY 277
+K RA+
Sbjct: 924 RKHRAH 929
Score = 28.9 bits (63), Expect = 5.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 157 ENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAERE 197
E +E D K++K K K+K+R K K ERE
Sbjct: 691 EEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKRERE 731
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 45.4 bits (106), Expect = 5e-05
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 105 QVDSHVELFEAQQELGDTAG-----NSGKAGADRPKGEAAAQAD-KPNSKRSRRQRNNEN 158
QV V + +A+ + G G K G + KG+ A + ++R++ + +
Sbjct: 232 QVPQPVPIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGISNKRKKGSSS 291
Query: 159 RENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQ 217
E+ D D + + + ++ K+SK + +++ + + YC +C Q
Sbjct: 292 EEDEREESDFDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQ 351
Query: 218 VSYGEMIGCDNDECPIEWFHFSCVG--LNHKPKGKWYCPKCRGE 259
GE+I CD CP +H C+ L P+GKW CP C E
Sbjct: 352 G--GEIILCDT--CP-RAYHLVCLDPELEKAPEGKWSCPHCEKE 390
Score = 33.5 bits (75), Expect = 0.21
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 134 PKGEAAAQADKPNSKRSRRQRNNENRENASSNHD-----HDDGASGTPKEKKAKTSKKKK 188
PK + + + K R+++ N E + + D +G+ +P +KK K K KK
Sbjct: 48 PKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKK 107
Query: 189 RSKAKAEREASPAD 202
KAK +++ D
Sbjct: 108 EKKAKRKKKDEDED 121
Score = 32.3 bits (72), Expect = 0.47
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 221 GEMIGCDNDECPIEWFHFSCVG--LNHKPKGKWYCPKC 256
GE++ CD CP +H C+ L P G+W CP+C
Sbjct: 426 GELLCCD--ACPSS-YHLHCLNPPLPEIPNGEWLCPRC 460
Score = 28.1 bits (61), Expect = 8.9
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 143 DKPNSKRSRRQRNN----ENRENAS--SNHDHDDGASGTPKEKKAKTSKKKKRSKAKAER 196
+K KR +++ +N EN E+ S + D + K+KK K K+KK + K +
Sbjct: 59 NKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDE 118
Query: 197 EASPAD 202
+ D
Sbjct: 119 DEDDND 124
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 45.1 bits (105), Expect = 7e-05
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 127 GKAGADRPKGEAAA-QADK-PNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTS 184
G G R KG + Q+D+ P + ++ + +AS DG T K K+ +
Sbjct: 297 GLLGGKRKKGGSYVFQSDEGPEPEAEESDLDSGSVHSASGR---PDGPVRTKKLKRGRPG 353
Query: 185 KKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYGEMIGCDNDECPIEWFHFSCVG- 242
+KKK+ + + YC +C Q GE+I CD CP +H C+
Sbjct: 354 RKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEIILCDT--CP-RAYHLVCLDP 408
Query: 243 -LNHKPKGKWYCPKCRGENEKTMDKALEKSKKE 274
L+ P+GKW CP C E + K E+ +E
Sbjct: 409 ELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEE 441
Score = 31.6 bits (70), Expect = 0.80
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 18/97 (18%)
Query: 163 SSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYG 221
S H +G KE++ + ++ + K E + + YC +C G
Sbjct: 419 SCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEED----------DHMEYCRVCKDG--G 466
Query: 222 EMIGCDNDECPIEWFHFSCVG--LNHKPKGKWYCPKC 256
E++ CD I +H C+ L P G+W CP+C
Sbjct: 467 ELLCCD---ACISSYHIHCLNPPLPDIPNGEWLCPRC 500
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 45.1 bits (105), Expect = 7e-05
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 127 GKAGADRPKGEAAA-QADK-PNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTS 184
G G R KG + Q+D+ P + ++ + +AS DG T K K+ +
Sbjct: 297 GLLGGKRKKGGSYVFQSDEGPEPEAEESDLDSGSVHSASGR---PDGPVRTKKLKRGRPG 353
Query: 185 KKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYGEMIGCDNDECPIEWFHFSCVG- 242
+KKK+ + + YC +C Q GE+I CD CP +H C+
Sbjct: 354 RKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEIILCDT--CP-RAYHLVCLDP 408
Query: 243 -LNHKPKGKWYCPKCRGENEKTMDKALEKSKKE 274
L+ P+GKW CP C E + K E+ +E
Sbjct: 409 ELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEE 441
Score = 31.6 bits (70), Expect = 0.80
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 18/97 (18%)
Query: 163 SSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYG 221
S H +G KE++ + ++ + K E + + YC +C G
Sbjct: 419 SCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEED----------DHMEYCRVCKDG--G 466
Query: 222 EMIGCDNDECPIEWFHFSCVG--LNHKPKGKWYCPKC 256
E++ CD I +H C+ L P G+W CP+C
Sbjct: 467 ELLCCD---ACISSYHIHCLNPPLPDIPNGEWLCPRC 500
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 45.1 bits (105), Expect = 7e-05
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 127 GKAGADRPKGEAAA-QADK-PNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTS 184
G G R KG + Q+D+ P + ++ + +AS DG T K K+ +
Sbjct: 356 GLLGGKRKKGGSYVFQSDEGPEPEAEESDLDSGSVHSASGR---PDGPVRTKKLKRGRPG 412
Query: 185 KKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYGEMIGCDNDECPIEWFHFSCVG- 242
+KKK+ + + YC +C Q GE+I CD CP +H C+
Sbjct: 413 RKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEIILCDT--CP-RAYHLVCLDP 467
Query: 243 -LNHKPKGKWYCPKCRGENEKTMDKALEKSKKE 274
L+ P+GKW CP C E + K E+ +E
Sbjct: 468 ELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEE 500
Score = 31.6 bits (70), Expect = 0.80
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 18/97 (18%)
Query: 163 SSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYC-LCNQVSYG 221
S H +G KE++ + ++ + K E + + YC +C G
Sbjct: 478 SCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEED----------DHMEYCRVCKDG--G 525
Query: 222 EMIGCDNDECPIEWFHFSCVG--LNHKPKGKWYCPKC 256
E++ CD I +H C+ L P G+W CP+C
Sbjct: 526 ELLCCD---ACISSYHIHCLNPPLPDIPNGEWLCPRC 559
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 43.9 bits (102), Expect = 2e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 178 EKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFH 237
E+K+K KKK++ K + + E + E C G+++ C CP + +H
Sbjct: 1824 EEKSKKFKKKQQGKRRTQGEITKE------REDECFSCGDA--GQLVSCKKPGCP-KVYH 1874
Query: 238 FSCVGLNHKPKGKWYCP 254
C+ L +P GKW CP
Sbjct: 1875 ADCLNLTKRPAGKWECP 1891
Score = 38.5 bits (88), Expect = 0.007
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 13/125 (10%)
Query: 143 DKPNSKRSRRQRNNENRENASSNHDHDD---GASGTPKEKKAKTSKKKKRSKAKAEREAS 199
DKP ++ +R + + N D G+ G + TS K+ +
Sbjct: 1197 DKPRKRKRQRHAAAKMQCKKVKNDDSSKEIPGSEGELMPHRTATSPKETVEEGVEHDPGM 1256
Query: 200 PADLPIDPN-------EPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWY 252
PA + + C N GE++ C+ C FH C+GL P+GK+
Sbjct: 1257 PASKKMQGERGGGAALKENVCQ-NCEKLGELLLCEAQCCGA--FHLECLGLTEMPRGKFI 1313
Query: 253 CPKCR 257
C +CR
Sbjct: 1314 CNECR 1318
Score = 31.6 bits (70), Expect = 0.80
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 221 GEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCR 257
G ++ CD+ CP FH C+ ++ P+G WYC C+
Sbjct: 1448 GSLLCCDS--CPAA-FHRECLNIDI-PEGNWYCNDCK 1480
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,007,517
Number of Sequences: 37866
Number of extensions: 518242
Number of successful extensions: 4824
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 343
Number of HSP's that attempted gapping in prelim test: 3502
Number of HSP's gapped (non-prelim): 1318
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.