Guide to the Human Genome
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Search of human proteins with 34335224

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34335224 cAMP responsive element modulator isoform t [Homo
sapiens]
         (236 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34335224 cAMP responsive element modulator isoform t [Homo sa...   462   e-130
gi|34335226 cAMP responsive element modulator isoform s [Homo sa...   451   e-127
gi|34335228 cAMP responsive element modulator isoform v [Homo sa...   401   e-112
gi|34335222 cAMP responsive element modulator isoform u [Homo sa...   374   e-104
gi|34335186 cAMP responsive element modulator isoform a [Homo sa...   347   7e-96
gi|34335216 cAMP responsive element modulator isoform p [Homo sa...   326   1e-89
gi|34335212 cAMP responsive element modulator isoform n [Homo sa...   325   2e-89
gi|34335214 cAMP responsive element modulator isoform o [Homo sa...   255   3e-68
gi|34335210 cAMP responsive element modulator isoform m [Homo sa...   254   3e-68
gi|34335206 cAMP responsive element modulator isoform b [Homo sa...   233   1e-61
gi|19745184 cAMP responsive element binding protein 1 isoform B ...   225   2e-59
gi|4758054 cAMP responsive element binding protein 1 isoform A [...   223   9e-59
gi|34335196 cAMP responsive element modulator isoform h [Homo sa...   199   2e-51
gi|34335194 cAMP responsive element modulator isoform g [Homo sa...   199   2e-51
gi|34335200 cAMP responsive element modulator isoform j [Homo sa...   198   3e-51
gi|34335188 cAMP responsive element modulator isoform d [Homo sa...   198   3e-51
gi|34335198 cAMP responsive element modulator isoform i [Homo sa...   190   8e-49
gi|34335220 cAMP responsive element modulator isoform r [Homo sa...   190   8e-49
gi|34335202 cAMP responsive element modulator isoform k [Homo sa...   171   4e-43
gi|34335190 cAMP responsive element modulator isoform e [Homo sa...   171   5e-43
gi|34335192 cAMP responsive element modulator isoform f [Homo sa...   171   7e-43
gi|34335204 cAMP responsive element modulator isoform l [Homo sa...   162   2e-40
gi|34335218 cAMP responsive element modulator isoform q [Homo sa...   162   2e-40
gi|4885073 activating transcription factor 1 [Homo sapiens]           156   1e-38
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho...    58   6e-09
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho...    51   1e-06
gi|209954788 activating transcription factor 6 beta isoform b [H...    50   2e-06
gi|20631977 activating transcription factor 6 beta isoform a [Ho...    50   2e-06
gi|18702325 cAMP responsive element binding protein 3-like 4 [Ho...    50   2e-06
gi|56786157 activating transcription factor 6 [Homo sapiens]           47   1e-05

>gi|34335224 cAMP responsive element modulator isoform t [Homo
           sapiens]
          Length = 236

 Score =  462 bits (1188), Expect = e-130
 Identities = 236/236 (100%), Positives = 236/236 (100%)

Query: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60
           MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI
Sbjct: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60

Query: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120
           AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA
Sbjct: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120

Query: 121 TMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRK 180
           TMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRK
Sbjct: 121 TMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRK 180

Query: 181 RELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           RELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 181 RELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236


>gi|34335226 cAMP responsive element modulator isoform s [Homo
           sapiens]
          Length = 248

 Score =  451 bits (1160), Expect = e-127
 Identities = 235/248 (94%), Positives = 235/248 (94%), Gaps = 12/248 (4%)

Query: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60
           MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI
Sbjct: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60

Query: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120
           AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA
Sbjct: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120

Query: 121 TMAVPTSIYQTSTGQY------------TATGDMPTYQIRAPTAALPQGVVMAASPGSLH 168
           TMAVPTSIYQTSTGQY             ATGDMPTYQIRAPTAALPQGVVMAASPGSLH
Sbjct: 121 TMAVPTSIYQTSTGQYNEETELAPSHMAAATGDMPTYQIRAPTAALPQGVVMAASPGSLH 180

Query: 169 SPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALK 228
           SPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALK
Sbjct: 181 SPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALK 240

Query: 229 DLYCHKVE 236
           DLYCHKVE
Sbjct: 241 DLYCHKVE 248


>gi|34335228 cAMP responsive element modulator isoform v [Homo
           sapiens]
          Length = 221

 Score =  401 bits (1030), Expect = e-112
 Identities = 207/220 (94%), Positives = 213/220 (96%)

Query: 17  MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 76
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60

Query: 77  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 136
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120

Query: 137 TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECR 196
           TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECR
Sbjct: 121 TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECR 180

Query: 197 RKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           R+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 181 RRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 220


>gi|34335222 cAMP responsive element modulator isoform u [Homo
           sapiens]
          Length = 299

 Score =  374 bits (961), Expect = e-104
 Identities = 214/299 (71%), Positives = 219/299 (73%), Gaps = 63/299 (21%)

Query: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60
           MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI
Sbjct: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60

Query: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120
           AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA
Sbjct: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120

Query: 121 TMAVPTSIYQTSTGQYTATGDMPTYQIRAP---------------TAALPQG-------- 157
           TMAVPTSIYQTSTGQY A     T QI  P               + A P G        
Sbjct: 121 TMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAA 180

Query: 158 ---------------VVMAASPGSLHSPQ-------------------------QLAEEA 177
                          VV+ A+ G + + Q                         QLAEEA
Sbjct: 181 QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEA 240

Query: 178 TRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           TRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 241 TRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 299


>gi|34335186 cAMP responsive element modulator isoform a [Homo
           sapiens]
          Length = 300

 Score =  347 bits (889), Expect = 7e-96
 Identities = 201/299 (67%), Positives = 212/299 (70%), Gaps = 63/299 (21%)

Query: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60
           MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI
Sbjct: 1   MSKCARKKYIKTNPRQMTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAI 60

Query: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120
           AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA
Sbjct: 61  AETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 120

Query: 121 TMAVPTSIYQTSTGQYTATGDMPTYQIRAP---------------TAALPQG-------- 157
           TMAVPTSIYQTSTGQY A     T QI  P               + A P G        
Sbjct: 121 TMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAA 180

Query: 158 ---------------VVMAASPGSLHSPQ-------------------------QLAEEA 177
                          VV+ A+ G + + Q                         QLAEEA
Sbjct: 181 QSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEA 240

Query: 178 TRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           TRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 241 TRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 299


>gi|34335216 cAMP responsive element modulator isoform p [Homo
           sapiens]
          Length = 207

 Score =  326 bits (835), Expect = 1e-89
 Identities = 167/181 (92%), Positives = 174/181 (96%)

Query: 56  QVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 115
           +VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT
Sbjct: 26  KVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 85

Query: 116 PPSIATMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAE 175
           PPSIATMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAE
Sbjct: 86  PPSIATMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAE 145

Query: 176 EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKV 235
           EATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K 
Sbjct: 146 EATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 205

Query: 236 E 236
           +
Sbjct: 206 D 206


>gi|34335212 cAMP responsive element modulator isoform n [Homo
           sapiens]
          Length = 182

 Score =  325 bits (834), Expect = 2e-89
 Identities = 167/180 (92%), Positives = 173/180 (96%)

Query: 57  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 116
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61

Query: 117 PSIATMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE 176
           PSIATMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE
Sbjct: 62  PSIATMAVPTSIYQTSTGQYTATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEE 121

Query: 177 ATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           ATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 122 ATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 181


>gi|34335214 cAMP responsive element modulator isoform o [Homo
           sapiens]
          Length = 270

 Score =  255 bits (651), Expect = 3e-68
 Identities = 150/244 (61%), Positives = 160/244 (65%), Gaps = 63/244 (25%)

Query: 56  QVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEE-- 113
           +VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEE  
Sbjct: 26  KVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 85

Query: 114 ---------------------------------------------------GTPPSIATM 122
                                                              G PP  AT+
Sbjct: 86  PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 145

Query: 123 AVPTSIYQTSTGQY----------TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ 172
               +     T Q+           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ
Sbjct: 146 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQ 205

Query: 173 LAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC 232
           LAEEATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+  
Sbjct: 206 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 265

Query: 233 HKVE 236
            K +
Sbjct: 266 PKTD 269


>gi|34335210 cAMP responsive element modulator isoform m [Homo
           sapiens]
          Length = 245

 Score =  254 bits (650), Expect = 3e-68
 Identities = 150/243 (61%), Positives = 159/243 (65%), Gaps = 63/243 (25%)

Query: 57  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEE--- 113
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEE   
Sbjct: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61

Query: 114 --------------------------------------------------GTPPSIATMA 123
                                                             G PP  AT+ 
Sbjct: 62  PSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIV 121

Query: 124 VPTSIYQTSTGQY----------TATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 173
              +     T Q+           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL
Sbjct: 122 QYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQL 181

Query: 174 AEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCH 233
           AEEATRKRELRLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   
Sbjct: 182 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 241

Query: 234 KVE 236
           K +
Sbjct: 242 KTD 244


>gi|34335206 cAMP responsive element modulator isoform b [Homo
           sapiens]
          Length = 137

 Score =  233 bits (594), Expect = 1e-61
 Identities = 120/121 (99%), Positives = 121/121 (100%)

Query: 17  MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 76
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60

Query: 77  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 136
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120

Query: 137 T 137
           +
Sbjct: 121 S 121


>gi|19745184 cAMP responsive element binding protein 1 isoform B
           [Homo sapiens]
          Length = 341

 Score =  225 bits (574), Expect = 2e-59
 Identities = 140/261 (53%), Positives = 160/261 (61%), Gaps = 72/261 (27%)

Query: 43  QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 95
           Q QT Q+S   L       Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 82  QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141

Query: 96  SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIY-------------------------- 129
           SSD PGVP+IEEE+SEEE + P+I T+ VPT IY                          
Sbjct: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGV 201

Query: 130 ------------------------QTSTGQY-----------TATGDMPTYQIR-APTAA 153
                                   QT+ GQ             A+GD+ TYQIR APT+ 
Sbjct: 202 QGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTST 261

Query: 154 LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVL 213
           +  GVVMA+SP     P Q AEEA RKRE+RLMKNREAARECRRKKKEYVKCLENRVAVL
Sbjct: 262 IAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVL 318

Query: 214 ENQNKTLIEELKALKDLYCHK 234
           ENQNKTLIEELKALKDLYCHK
Sbjct: 319 ENQNKTLIEELKALKDLYCHK 339



 Score = 28.1 bits (61), Expect = 6.9
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 117 PSIATMAVPTSIYQTSTGQYTATGDMPTYQ-IRAPTAALPQ--GVVMAASPGSLHSPQQL 173
           P IAT+A      Q S     AT   PT   ++ P     Q  GV+ AA P  + SPQ  
Sbjct: 31  PQIATLA------QVSMPAAHATSSAPTVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQ 84

Query: 174 AEEATRKRELRLMKNRE 190
             +++ K   RL    +
Sbjct: 85  TVQSSCKDLKRLFSGTQ 101


>gi|4758054 cAMP responsive element binding protein 1 isoform A
           [Homo sapiens]
          Length = 327

 Score =  223 bits (569), Expect = 9e-59
 Identities = 134/242 (55%), Positives = 153/242 (63%), Gaps = 66/242 (27%)

Query: 56  QVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 114
           Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE 
Sbjct: 87  QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEET 146

Query: 115 TPPSIATMAVPTSIY--------------------------------------------- 129
           + P+I T+ VPT IY                                             
Sbjct: 147 SAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTT 206

Query: 130 -----QTSTGQY-----------TATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQ 172
                QT+ GQ             A+GD+ TYQIR APT+ +  GVVMA+SP     P Q
Sbjct: 207 ILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQ 263

Query: 173 LAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC 232
            AEEA RKRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC
Sbjct: 264 PAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC 323

Query: 233 HK 234
           HK
Sbjct: 324 HK 325



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 16/102 (15%)

Query: 117 PSIATMAVPTSIYQTSTGQYTATGDMPTYQ-IRAPTAALPQ--GVVMAASPGSLHSPQ-- 171
           P IAT+A      Q S     AT   PT   ++ P     Q  GV+ AA P  + SPQ  
Sbjct: 31  PQIATLA------QVSMPAAHATSSAPTVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQ 84

Query: 172 -----QLAEEATRKRELRLMKNREAARECRRKKKEYVKCLEN 208
                 +AE    +  +  + + +  RE   ++  Y K L +
Sbjct: 85  TVQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILND 126


>gi|34335196 cAMP responsive element modulator isoform h [Homo
           sapiens]
          Length = 112

 Score =  199 bits (506), Expect = 2e-51
 Identities = 102/108 (94%), Positives = 104/108 (96%), Gaps = 1/108 (0%)

Query: 130 QTSTGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 188
           Q  +GQ +A TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
Sbjct: 5   QELSGQLSAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 64

Query: 189 REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 65  REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 112


>gi|34335194 cAMP responsive element modulator isoform g [Homo
           sapiens]
          Length = 108

 Score =  199 bits (505), Expect = 2e-51
 Identities = 102/105 (97%), Positives = 102/105 (97%), Gaps = 1/105 (0%)

Query: 133 TGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 191
           TG  TA TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA
Sbjct: 4   TGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 63

Query: 192 ARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           ARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 64  ARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 108


>gi|34335200 cAMP responsive element modulator isoform j [Homo
           sapiens]
          Length = 102

 Score =  198 bits (504), Expect = 3e-51
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 138 ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR 197
           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR
Sbjct: 4   ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR 63

Query: 198 KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 64  KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 102


>gi|34335188 cAMP responsive element modulator isoform d [Homo
           sapiens]
          Length = 120

 Score =  198 bits (504), Expect = 3e-51
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 138 ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR 197
           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR
Sbjct: 22  ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR 81

Query: 198 KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 82  KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 120


>gi|34335198 cAMP responsive element modulator isoform i [Homo
           sapiens]
          Length = 95

 Score =  190 bits (483), Expect = 8e-49
 Identities = 95/95 (100%), Positives = 95/95 (100%)

Query: 142 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 201
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 60

Query: 202 YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 61  YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 95


>gi|34335220 cAMP responsive element modulator isoform r [Homo
           sapiens]
          Length = 95

 Score =  190 bits (483), Expect = 8e-49
 Identities = 95/95 (100%), Positives = 95/95 (100%)

Query: 142 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 201
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 60

Query: 202 YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE
Sbjct: 61  YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 95


>gi|34335202 cAMP responsive element modulator isoform k [Homo
           sapiens]
          Length = 113

 Score =  171 bits (434), Expect = 4e-43
 Identities = 89/108 (82%), Positives = 97/108 (89%), Gaps = 1/108 (0%)

Query: 130 QTSTGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 188
           Q  +GQ +A TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
Sbjct: 5   QELSGQLSAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN 64

Query: 189 REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           REAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 65  REAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 112


>gi|34335190 cAMP responsive element modulator isoform e [Homo
           sapiens]
          Length = 109

 Score =  171 bits (433), Expect = 5e-43
 Identities = 89/105 (84%), Positives = 95/105 (90%), Gaps = 1/105 (0%)

Query: 133 TGQYTA-TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 191
           TG  TA TGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA
Sbjct: 4   TGDDTAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREA 63

Query: 192 ARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           A+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 64  AKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108


>gi|34335192 cAMP responsive element modulator isoform f [Homo
           sapiens]
          Length = 121

 Score =  171 bits (432), Expect = 7e-43
 Identities = 86/99 (86%), Positives = 92/99 (92%)

Query: 138 ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRR 197
           ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR
Sbjct: 22  ATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRR 81

Query: 198 KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           +KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 82  RKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 120


>gi|34335204 cAMP responsive element modulator isoform l [Homo
           sapiens]
          Length = 96

 Score =  162 bits (411), Expect = 2e-40
 Identities = 82/95 (86%), Positives = 88/95 (92%)

Query: 142 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 201
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR+KKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 60

Query: 202 YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           YVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 95


>gi|34335218 cAMP responsive element modulator isoform q [Homo
           sapiens]
          Length = 96

 Score =  162 bits (411), Expect = 2e-40
 Identities = 82/95 (86%), Positives = 88/95 (92%)

Query: 142 MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 201
           MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA+ECRR+KKE
Sbjct: 1   MPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKE 60

Query: 202 YVKCLENRVAVLENQNKTLIEELKALKDLYCHKVE 236
           YVKCLE+RVAVLE QNK LIEEL+ LKD+   K +
Sbjct: 61  YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 95


>gi|4885073 activating transcription factor 1 [Homo sapiens]
          Length = 271

 Score =  156 bits (395), Expect = 1e-38
 Identities = 110/243 (45%), Positives = 132/243 (54%), Gaps = 68/243 (27%)

Query: 56  QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 114
           QV++++E++ES +S   I  S K   IL+RRPSYRKIL +LSS+     K + E S   G
Sbjct: 31  QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87

Query: 115 TPPSIATMAVPTSIY--------------------------------------------- 129
              ++ +M+VPT IY                                             
Sbjct: 88  VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147

Query: 130 -----QTSTGQY-----------TATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQ 171
                QTS GQ            TA+GDM TYQIR   +A  LPQ VVM  SP +L S  
Sbjct: 148 ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQT 206

Query: 172 QLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 231
              ++   KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY
Sbjct: 207 TKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLY 266

Query: 232 CHK 234
            +K
Sbjct: 267 SNK 269


>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
           sapiens]
          Length = 519

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 14/80 (17%)

Query: 170 PQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLE--------------NRVAVLEN 215
           P   AEE   KR  R +KN+ +A+E RRKKKEYV+CLE               +V  LEN
Sbjct: 282 PLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLEN 341

Query: 216 QNKTLIEELKALKDLYCHKV 235
            N+TL+++L+ L+ L  +K+
Sbjct: 342 ANRTLLQQLQKLQTLVTNKI 361


>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
           sapiens]
          Length = 520

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 14/80 (17%)

Query: 170 PQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLE--------------NRVAVLEN 215
           P   +EE   K+  R +KN+ +A+E RRKKKEY+  LE               +V VLEN
Sbjct: 286 PLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLEN 345

Query: 216 QNKTLIEELKALKDLYCHKV 235
            N+TL+++L+ L+ L   KV
Sbjct: 346 TNRTLLQQLQKLQTLVMGKV 365


>gi|209954788 activating transcription factor 6 beta isoform b [Homo
           sapiens]
          Length = 700

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 146 QIRAPTAALPQ----GVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 201
           Q   P  +LP+     +V A  PG+   P+   +    KR+ R++KNRE+A + RRKKKE
Sbjct: 288 QPEGPAPSLPRPERKSIVPAPMPGNSCPPE--VDAKLLKRQQRMIKNRESACQSRRKKKE 345

Query: 202 YVKCLENRVAVLENQNKTLIEELKALK 228
           Y++ LE R+  +   N+ L  E  AL+
Sbjct: 346 YLQGLEARLQAVLADNQQLRRENAALR 372


>gi|20631977 activating transcription factor 6 beta isoform a [Homo
           sapiens]
          Length = 703

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 146 QIRAPTAALPQ----GVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKE 201
           Q   P  +LP+     +V A  PG+   P+   +    KR+ R++KNRE+A + RRKKKE
Sbjct: 291 QPEGPAPSLPRPERKSIVPAPMPGNSCPPE--VDAKLLKRQQRMIKNRESACQSRRKKKE 348

Query: 202 YVKCLENRVAVLENQNKTLIEELKALK 228
           Y++ LE R+  +   N+ L  E  AL+
Sbjct: 349 YLQGLEARLQAVLADNQQLRRENAALR 375


>gi|18702325 cAMP responsive element binding protein 3-like 4 [Homo
           sapiens]
          Length = 395

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 24/61 (39%), Positives = 41/61 (67%)

Query: 168 HSPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKAL 227
           H P   AEE   K+  R ++N+++A++ RR+KKEY+  LE+RVA    QN+ L ++++ L
Sbjct: 207 HLPLTKAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQEL 266

Query: 228 K 228
           +
Sbjct: 267 E 267


>gi|56786157 activating transcription factor 6 [Homo sapiens]
          Length = 670

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 23/205 (11%)

Query: 34  LTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH--------KRREILSRR 85
           LT  K   V ++      P L   A   +T+ S  ++ +I           K++ I+S +
Sbjct: 165 LTPKKKIQVNSKPSIQPKPLLLPAAPKTQTNSSVPAKTIIIQTVPTLMPLAKQQPIISLQ 224

Query: 86  PSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYTATGDMPTY 145
           P+  K    L S  P V +++          P +   A P        G  T   +    
Sbjct: 225 PAPTKGQTVLLSQ-PTVVQLQA---------PGVLPSAQPVLAV---AGGVTQLPNHVVN 271

Query: 146 QIRAPTAALPQGVVMAASPGSLHSPQQL--AEEATRKRELRLMKNREAARECRRKKKEYV 203
            + AP+A  P    ++ +   L S  +   ++ A  +R+ R++KNRE+A + R+KKKEY+
Sbjct: 272 VVPAPSANSPVNGKLSVTKPVLQSTMRNVGSDIAVLRRQQRMIKNRESACQSRKKKKEYM 331

Query: 204 KCLENRVAVLENQNKTLIEELKALK 228
             LE R+    ++N+ L +E   LK
Sbjct: 332 LGLEARLKAALSENEQLKKENGTLK 356


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.123    0.330 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,812,823
Number of Sequences: 37866
Number of extensions: 390298
Number of successful extensions: 2250
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 2047
Number of HSP's gapped (non-prelim): 311
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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