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Search of human proteins with 33356154
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33356154 ubiquitin-conjugating enzyme E2H isoform 2 [Homo
sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33356154 ubiquitin-conjugating enzyme E2H isoform 2 [Homo sap... 310 2e-85
gi|4507783 ubiquitin-conjugating enzyme E2H isoform 1 [Homo sapi... 294 2e-80
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 54 7e-08
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 53 1e-07
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 51 4e-07
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 50 6e-07
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 50 6e-07
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 50 1e-06
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 50 1e-06
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 49 2e-06
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 2e-06
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 2e-06
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 2e-06
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 2e-06
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 2e-06
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 49 2e-06
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 49 2e-06
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 49 2e-06
gi|32967276 ubiquitin-conjugating enzyme E2A isoform 2 [Homo sap... 46 1e-05
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi... 45 2e-05
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 45 2e-05
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 45 2e-05
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 45 3e-05
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 45 3e-05
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 44 4e-05
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 44 5e-05
gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens] 41 3e-04
gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens] 41 3e-04
gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens] 41 3e-04
gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens] 41 3e-04
>gi|33356154 ubiquitin-conjugating enzyme E2H isoform 2 [Homo
sapiens]
Length = 152
Score = 310 bits (795), Expect = 2e-85
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 61 YPFKSPSIDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 120
YPFKSPSIDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE
Sbjct: 61 YPFKSPSIDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 120
Query: 121 EALKEQEEGTGDSSSESSMSDFSEDEAQDMEL 152
EALKEQEEGTGDSSSESSMSDFSEDEAQDMEL
Sbjct: 121 EALKEQEEGTGDSSSESSMSDFSEDEAQDMEL 152
>gi|4507783 ubiquitin-conjugating enzyme E2H isoform 1 [Homo
sapiens]
Length = 183
Score = 294 bits (753), Expect = 2e-80
Identities = 152/183 (83%), Positives = 152/183 (83%), Gaps = 31/183 (16%)
Query: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 61 YPFKSPSI-------------------------------DLTNIFESFLPQLLAYPNPID 89
YPFKSPSI DLTNIFESFLPQLLAYPNPID
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPID 120
Query: 90 PLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEGTGDSSSESSMSDFSEDEAQD 149
PLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEGTGDSSSESSMSDFSEDEAQD
Sbjct: 121 PLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEGTGDSSSESSMSDFSEDEAQD 180
Query: 150 MEL 152
MEL
Sbjct: 181 MEL 183
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 53.5 bits (127), Expect = 7e-08
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 37/147 (25%)
Query: 5 SPGKRRMDTDVVKLIESKHEVTILGGLNEFVVK-----FYGPQGTPYEGGVWKVRVDLPD 59
+P +RR+ D +L E V + G +E + +GP+GTP+E G +K+ ++ +
Sbjct: 3 TPARRRLMRDFKRLQEDP-PVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSE 61
Query: 60 KYPFK------------------------------SPSIDLTNIFESFLPQLLAYPNPID 89
+YP K SP+ D+++I S + LL PNP
Sbjct: 62 EYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNPNS 120
Query: 90 PLNGDAAAMYLHRPEEYKQKIKEYIQK 116
P N AA +Y EY++++ +++
Sbjct: 121 PANSQAAQLYQENKREYEKRVSAIVEQ 147
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 52.8 bits (125), Expect = 1e-07
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 35/146 (23%)
Query: 5 SPGKRRMDTDVVKLIESKHE-VTILGGLNEFVV---KFYGPQGTPYEGGVWKVRVDLPDK 60
+P +RR+ D +L E V+ N +V +GP+GTP+E G +K+ ++ ++
Sbjct: 3 TPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEE 62
Query: 61 YPFK------------------------------SPSIDLTNIFESFLPQLLAYPNPIDP 90
YP K SP+ D+++I S + LL PNP P
Sbjct: 63 YPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNPNSP 121
Query: 91 LNGDAAAMYLHRPEEYKQKIKEYIQK 116
N AA +Y EY++++ +++
Sbjct: 122 ANSQAAQLYQENKREYEKRVSAIVEQ 147
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 50.8 bits (120), Expect = 4e-07
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP + Y+GGV+ + V P YPFK P I T +I S
Sbjct: 39 GPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL D A +Y E+Y + +E+ QKYA
Sbjct: 99 VSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 146
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 50.4 bits (119), Expect = 6e-07
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 10 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 69
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y E+Y + +E+ QKYA
Sbjct: 70 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 117
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 50.4 bits (119), Expect = 6e-07
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y E+Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 49.7 bits (117), Expect = 1e-06
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 33/131 (25%)
Query: 31 LNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSID-LTNIFE-------------- 75
+++ + G TPYE GV+K+ V +P++YPF+ P I LT I+
Sbjct: 31 MDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVL 90
Query: 76 ------------------SFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKY 117
+ + L++ PNP DPL D ++ + + + + +++ +K+
Sbjct: 91 KLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKH 150
Query: 118 ATEEALKEQEE 128
A ++ ++EE
Sbjct: 151 ARQKQKADEEE 161
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 49.7 bits (117), Expect = 1e-06
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A Y E+Y + +E+ QKYA
Sbjct: 99 VSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYA 146
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 41 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 100
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 101 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 148
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 48.9 bits (115), Expect = 2e-06
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ QKYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 48.5 bits (114), Expect = 2e-06
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDLT----------------NIFES------- 76
GP +PY+GGV+ + + P YPFK P + T +I S
Sbjct: 39 GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 98
Query: 77 ------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL PNP DPL + A +Y ++Y + +E+ +KYA
Sbjct: 99 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRLAREWTEKYA 146
>gi|32967276 ubiquitin-conjugating enzyme E2A isoform 2 [Homo
sapiens]
Length = 122
Score = 46.2 bits (108), Expect = 1e-05
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 5 SPGKRRMDTDVVKLIESKHE-VTILGGLNEFVV---KFYGPQGTPYEGGVWKVRVDLPDK 60
+P +RR+ D +L E V+ N +V +GP+GTP+E + L
Sbjct: 3 TPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDVYADGSICLDIL 62
Query: 61 YPFKSPSIDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQK 116
SP+ D+++I S + LL PNP P N AA +Y EY++++ +++
Sbjct: 63 QNRWSPTYDVSSILTS-IQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQ 117
>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
sapiens]
Length = 200
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 30/109 (27%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSID-LTNIFES---------------------- 76
GP TPYEGG +++ + +P+ YPF P + +T I+
Sbjct: 45 GPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAM 104
Query: 77 -------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
L LLA P DP + A Y PE +KQ + + YA
Sbjct: 105 TLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 29/109 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL-TNIF----------------ESFLP--- 79
GP G+ YEGGV+ + + +YPFK P + T I+ +++ P
Sbjct: 68 GPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALT 127
Query: 80 ---------QLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 119
LL NP DPL G A Y+ E+ + +++ ++YAT
Sbjct: 128 ISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 176
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 45.1 bits (105), Expect = 2e-05
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 29/109 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL-TNIF----------------ESFLP--- 79
GP G+ YEGGV+ + + +YPFK P + T I+ +++ P
Sbjct: 85 GPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALT 144
Query: 80 ---------QLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 119
LL NP DPL G A Y+ E+ + +++ ++YAT
Sbjct: 145 ISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 193
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 44.7 bits (104), Expect = 3e-05
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 29/109 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL-TNIF----------------ESFLP--- 79
GP G+ YEGGV+ + + YPFK P + T I+ +++ P
Sbjct: 99 GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALT 158
Query: 80 ---------QLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 119
LL NP DPL G A YL E+ + +++ ++YAT
Sbjct: 159 ISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT 207
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 44.7 bits (104), Expect = 3e-05
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 29/109 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL-TNIF----------------ESFLP--- 79
GP G+ YEGGV+ + + YPFK P + T I+ +++ P
Sbjct: 99 GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALT 158
Query: 80 ---------QLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 119
LL NP DPL G A YL E+ + +++ ++YAT
Sbjct: 159 ISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT 207
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 44.3 bits (103), Expect = 4e-05
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 29/109 (26%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL-TNIF----------------ESFLP--- 79
GP G+ YEGGV+ + + YPFK P + T I+ +++ P
Sbjct: 93 GPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALT 152
Query: 80 ---------QLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 119
LL NP DPL G A Y+ E+ + +++ ++YAT
Sbjct: 153 ISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 201
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 43.9 bits (102), Expect = 5e-05
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 34 FVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSID-LTNIFES---------------- 76
F V GPQ +P+EGG +K+ + LP++YP +P + +T I+
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK 94
Query: 77 ------------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ LL+ PNP DPL D A + + + + + + YA
Sbjct: 95 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
>gi|35494003 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 31/110 (28%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL------TNIFES----------------- 76
G +GTP+EGG++K+R+ D YP P N++ S
Sbjct: 47 GKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPA 106
Query: 77 --------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ +LL PN DP +A +Y EY+++++ +K+A
Sbjct: 107 ITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
>gi|35493996 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 31/110 (28%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL------TNIFES----------------- 76
G +GTP+EGG++K+R+ D YP P N++ S
Sbjct: 47 GKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPA 106
Query: 77 --------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ +LL PN DP +A +Y EY+++++ +K+A
Sbjct: 107 ITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
>gi|35493987 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 31/110 (28%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL------TNIFES----------------- 76
G +GTP+EGG++K+R+ D YP P N++ S
Sbjct: 47 GKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPA 106
Query: 77 --------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ +LL PN DP +A +Y EY+++++ +K+A
Sbjct: 107 ITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
>gi|4507785 ubiquitin-conjugating enzyme E2I [Homo sapiens]
Length = 158
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 31/110 (28%)
Query: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIDL------TNIFES----------------- 76
G +GTP+EGG++K+R+ D YP P N++ S
Sbjct: 47 GKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPA 106
Query: 77 --------FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 118
+ +LL PN DP +A +Y EY+++++ +K+A
Sbjct: 107 ITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,561,841
Number of Sequences: 37866
Number of extensions: 308323
Number of successful extensions: 1409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1262
Number of HSP's gapped (non-prelim): 179
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.