Guide to the Human Genome
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Name: MRPS9 Sequence: fasta or formatted (396aa) NCBI GI: 33188463
Description:

mitochondrial ribosomal protein S9

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         27           2
 C cysteine            1.0          4           1
 D aspartate           4.0         16           1
 E glutamate           8.3         33           3
 F phenylalanine       4.8         19           1
 G glycine             6.8         27           3
 H histidine           2.5         10           1
 I isoleucine          4.5         18           1
 K lysine              8.1         32           2
 L leucine             9.3         37           3
 M methionine          3.0         12           2
 N asparagine          1.5          6           1
 P proline             4.0         16           1
 Q glutamine           5.8         23           1
 R arginine            8.3         33           2
 S serine              5.3         21           1
 T threonine           5.3         21           2
 V valine              5.3         21           1
 W tryptophan          1.5          6           1
 Y tyrosine            3.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein S9 
RPS16                 0.035   ribosomal protein S16 
GOLGA4                0.015   golgi autoantigen, golgin subfamily a, 4 
FREM2                 0.010   FRAS1-related extracellular matrix protein 2 precurs...
ZNF420                0.008   zinc finger protein 420 
NF2                   0.006   neurofibromin 2 isoform 7 
NF2                   0.006   neurofibromin 2 isoform 2 
NF2                   0.006   neurofibromin 2 isoform 2 
NF2                   0.006   neurofibromin 2 isoform 7 
NF2                   0.006   neurofibromin 2 isoform 6 
NF2                   0.006   neurofibromin 2 isoform 5 
NF2                   0.006   neurofibromin 2 isoform 2 
NF2                   0.006   neurofibromin 2 isoform 1 
CGN                   0.006   cingulin 
CAPN7                 0.006   calpain 7 
RP9                   0.006   retinitis pigmentosa 9 
PDCL2                 0.005   phosducin-like 2 
DMAP1                 0.005   DNA methyltransferase 1 associated protein 1 
DMAP1                 0.005   DNA methyltransferase 1 associated protein 1 
DMAP1                 0.005   DNA methyltransferase 1 associated protein 1 
DIAPH1                0.005   diaphanous 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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