Guide to the Human Genome
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Name: PRDX2 Sequence: fasta or formatted (142aa) NCBI GI: 33188454
Description:

peroxiredoxin 2 isoform c

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [198aa] peroxiredoxin 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         12           2
 C cysteine            1.4          2           1
 D aspartate           4.2          6           1
 E glutamate           4.9          7           1
 F phenylalanine       7.0         10           2
 G glycine             5.6          8           1
 H histidine           0.7          1           1
 I isoleucine          4.9          7           2
 K lysine              7.7         11           1
 L leucine             9.2         13           2
 M methionine          2.8          4           2
 N asparagine          2.8          4           1
 P proline             7.7         11           2
 Q glutamine           1.4          2           1
 R arginine            4.2          6           1
 S serine              7.7         11           2
 T threonine           4.9          7           1
 V valine              9.2         13           2
 W tryptophan          2.1          3           1
 Y tyrosine            2.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peroxiredoxin 2 isoform c 
PRDX2                 0.581   peroxiredoxin 2 isoform a 
PRDX1                 0.453   peroxiredoxin 1 
PRDX1                 0.453   peroxiredoxin 1 
PRDX1                 0.453   peroxiredoxin 1 
PRDX4                 0.389   peroxiredoxin 4 
LOC100292021          0.385   PREDICTED: similar to thioredoxin peroxidase 
PRDX3                 0.351   peroxiredoxin 3 isoform a precursor 
PRDX3                 0.351   peroxiredoxin 3 isoform b 
PRDX6                 0.106   peroxiredoxin 6 
LOC100133641          0.034   PREDICTED: similar to peroxiredoxin 6 
SERINC2               0.008   tumor differentially expressed 2-like 
PGLS                  0.008   6-phosphogluconolactonase 
C20orf185             0.008   antimicrobial peptide RYA3 
HUWE1                 0.004   HECT, UBA and WWE domain containing 1 
LIMD1                 0.004   LIM domains containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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