Guide to the Human Genome
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Name: PRDX3 Sequence: fasta or formatted (256aa) NCBI GI: 5802974
Description:

peroxiredoxin 3 isoform a precursor

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [238aa] peroxiredoxin 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         26           3
 C cysteine            2.3          6           1
 D aspartate           4.7         12           2
 E glutamate           3.9         10           2
 F phenylalanine       5.5         14           2
 G glycine             6.6         17           2
 H histidine           3.5          9           1
 I isoleucine          3.9         10           2
 K lysine              5.1         13           1
 L leucine            10.2         26           2
 M methionine          0.8          2           1
 N asparagine          4.3         11           1
 P proline             5.5         14           1
 Q glutamine           2.3          6           1
 R arginine            3.9         10           1
 S serine              9.4         24           3
 T threonine           5.5         14           1
 V valine              9.0         23           2
 W tryptophan          1.2          3           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peroxiredoxin 3 isoform a precursor 
PRDX3                 0.905   peroxiredoxin 3 isoform b 
PRDX4                 0.507   peroxiredoxin 4 
PRDX2                 0.491   peroxiredoxin 2 isoform a 
PRDX1                 0.485   peroxiredoxin 1 
PRDX1                 0.485   peroxiredoxin 1 
PRDX1                 0.485   peroxiredoxin 1 
LOC100292021          0.306   PREDICTED: similar to thioredoxin peroxidase 
PRDX2                 0.189   peroxiredoxin 2 isoform c 
PRDX6                 0.079   peroxiredoxin 6 
LOC100133641          0.024   PREDICTED: similar to peroxiredoxin 6 
PLAU                  0.010   plasminogen activator, urokinase isoform 1 preproprot...
DCLK2                 0.006   doublecortin-like kinase 2 isoform b 
DCLK2                 0.006   doublecortin-like kinase 2 isoform a 
ARID5A                0.006   AT rich interactive domain 5A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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