Search of human proteins with 122937452

Search of human proteins with 122937452

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122937452 oocyte expressed protein homolog [Homo sapiens]
         (149 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122937452 oocyte expressed protein homolog [Homo sapiens]          310   2e-85
gi|70608179 developmental pluripotency associated 5 [Homo sapiens]     65   2e-11
gi|62821796 hypothetical protein LOC154288 [Homo sapiens]              63   1e-10
gi|186910188 hypothetical protein LOC100129128 [Homo sapiens]          37   0.005
gi|117956389 KH homology domain containing 1 [Homo sapiens]            36   0.010
gi|150456424 RW1 protein [Homo sapiens]                                32   0.26 
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi...    29   1.7  
gi|45504380 jumonji domain containing 2B [Homo sapiens]                28   2.2  
gi|4505101 microtubule-associated protein 7 [Homo sapiens]             27   4.9  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       27   6.4  
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...    27   6.4  

>gi|122937452 oocyte expressed protein homolog [Homo sapiens]
          Length = 149

 Score =  310 bits (795), Expect = 2e-85
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MVDDAGAAESQRGKQTPAHSLEQLRRLPLPPPQIRIRPWWFPVQELRDPLVFYLEAWLAD 60
           MVDDAGAAESQRGKQTPAHSLEQLRRLPLPPPQIRIRPWWFPVQELRDPLVFYLEAWLAD
Sbjct: 1   MVDDAGAAESQRGKQTPAHSLEQLRRLPLPPPQIRIRPWWFPVQELRDPLVFYLEAWLAD 60

Query: 61  ELFGPDRAIIPEMEWTSQALLTVDIVDSGNLVEITVFGRPRVQNRVKSMLLCLAWFHREH 120
           ELFGPDRAIIPEMEWTSQALLTVDIVDSGNLVEITVFGRPRVQNRVKSMLLCLAWFHREH
Sbjct: 61  ELFGPDRAIIPEMEWTSQALLTVDIVDSGNLVEITVFGRPRVQNRVKSMLLCLAWFHREH 120

Query: 121 RARAEKMKHLEKNLKAHASDPHSPQDPVA 149
           RARAEKMKHLEKNLKAHASDPHSPQDPVA
Sbjct: 121 RARAEKMKHLEKNLKAHASDPHSPQDPVA 149


>gi|70608179 developmental pluripotency associated 5 [Homo sapiens]
          Length = 116

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 5/106 (4%)

Query: 31  PPQIRIRPWWFPVQELRDPLVFYLEAWLADELFGPDRAIIPEMEWTSQALLTVDIVDSGN 90
           P +  I PW    ++L+DP VF ++  L   +FGPD + IP +E  S+A+L +  ++S +
Sbjct: 5   PARRHIPPWVKVPEDLKDPEVFQVQTRLLKAIFGPDGSRIPYIEQVSKAMLELKALESSD 64

Query: 91  LVEITVFGRPRVQNRVKSMLLCLAWFHREHRAR-----AEKMKHLE 131
           L E+ V+G    + R K ML  +A +HR+ + R     AE M  LE
Sbjct: 65  LTEVVVYGSYLYKLRTKWMLQSMAEWHRQRQERGMLKLAEAMNALE 110


>gi|62821796 hypothetical protein LOC154288 [Homo sapiens]
          Length = 217

 Score = 62.8 bits (151), Expect = 1e-10
 Identities = 32/84 (38%), Positives = 49/84 (58%)

Query: 40  WFPVQELRDPLVFYLEAWLADELFGPDRAIIPEMEWTSQALLTVDIVDSGNLVEITVFGR 99
           WF  + L++P V  LE WL +++FG     IP ++  SQ L+ V+ +D     EI VFGR
Sbjct: 33  WFHSEFLKNPKVVRLEVWLVEKIFGRGGERIPHVQGMSQILIHVNRLDPNGEAEILVFGR 92

Query: 100 PRVQNRVKSMLLCLAWFHREHRAR 123
           P  Q     M++ LA +HR+ +A+
Sbjct: 93  PSYQEDTIKMIMNLADYHRQLQAK 116


>gi|186910188 hypothetical protein LOC100129128 [Homo sapiens]
          Length = 128

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 38  PWWFPVQELRDPLVFYLEAWLADELFGPDRAIIPEMEWTSQALLTVD-IVDSGNLVEITV 96
           PWW   +    P+VF++E    + +FG D   +  +E  S  L+ ++    +     +TV
Sbjct: 12  PWWTLPENFHSPMVFHMEEDQEELIFGLDDTYLRCIELHSHTLIQLERCFTATGQTRVTV 71

Query: 97  FGRPRVQNRVKSMLLCLAWFHREHRARAEKMKHLEK 132
            G P  +  +  M  C+    ++ +  A  +K LE+
Sbjct: 72  VGPPMAKQWLLLMFHCVG--SQDSKCHARGLKMLER 105


>gi|117956389 KH homology domain containing 1 [Homo sapiens]
          Length = 164

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 37  RPWWFPVQELRDPLVFYLEAWLADELFGPDRAIIPEMEWTSQALLTVDI-VDSGNLVEIT 95
           +PWW   Q    P+VF++E    + +FG     +  +E  S  L+ ++    +     +T
Sbjct: 11  KPWWTLPQNFHAPMVFHMEEDQEELIFGHGDTYLRCIEVHSHTLIQLESWFTATGQTRVT 70

Query: 96  VFGRPRVQNRVKSMLLCLAWFHREHRARAEKM 127
           V G  R +  +  M  C+      H AR  +M
Sbjct: 71  VVGPHRARQWLLHMFCCVGSQDSYHHARGLEM 102


>gi|150456424 RW1 protein [Homo sapiens]
          Length = 1883

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 6    GAAESQRGKQTPAHS-LEQLRRLPLPPP 32
            GA +SQ G Q  AHS LEQ  + PLPPP
Sbjct: 1282 GAKQSQHGSQHHAHSPLEQHPQPPLPPP 1309


>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
           sapiens]
          Length = 862

 Score = 28.9 bits (63), Expect = 1.7
 Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 3   DDAGAAESQRGKQTPAHSLEQLRRLPLPPPQIRIRPWWFPVQELRDPLVFYLEAWLADEL 62
           +DAGA E++R     + SL      P  PP    RP   P    R P           E 
Sbjct: 184 EDAGAGENRRVSGNNSPSLSNGGFKPSRPP----RPSRPPPPTPRRPASVNGSPSATSES 239

Query: 63  FGPDRAIIPEMEWTSQALLTVDIVDSGNLVEITVFG--RPRVQNRVKSMLLCLAWFHR-E 119
            G     +P    T+    T +   SG ++ +T+ G   PR  N V    L   W  R +
Sbjct: 240 DGSSTGSLPP---TNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQAPLPPGWEQRVD 296

Query: 120 HRARAEKMKHLEKNLKAHASDPHSP 144
              R   + H+EK       +P  P
Sbjct: 297 QHGRVYYVDHVEKRTTWDRPEPLPP 321


>gi|45504380 jumonji domain containing 2B [Homo sapiens]
          Length = 1096

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 6   GAAESQRGKQTP--AHSLEQLRRLPLPPPQIRIRPWWFPVQELRDPLVFYLEAWLADELF 63
           GA E  RGK  P  A S  + +   L PPQ+   P  FP +E       +L + L   + 
Sbjct: 436 GAEEDGRGKLRPTKAKSERKKKSFGLLPPQLPPPPAHFPSEE-----ALWLPSPLEPPVL 490

Query: 64  GPDRAIIPE 72
           GP  A + E
Sbjct: 491 GPGPAAMEE 499


>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
          Length = 749

 Score = 27.3 bits (59), Expect = 4.9
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 99  RPRVQNRVKSMLLC-LAWFHREHRARAEKMKHLEKNLK 135
           R R + R K +    + W  RE RAR    KHLE+  K
Sbjct: 71  RERREEREKQLAAREIVWLEREERARQHYEKHLEERKK 108


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 26.9 bits (58), Expect = 6.4
 Identities = 15/49 (30%), Positives = 21/49 (42%)

Query: 37   RPWWFPVQELRDPLVFYLEAWLADELFGPDRAIIPEMEWTSQALLTVDI 85
            +P+   V ELR  L   LE W   E   P+   +    W S  +LT  +
Sbjct: 5275 QPFLKDVNELRQELERQLEMWQPRESGNPEEEKVAAEMWQSYLILTAPL 5323


>gi|38569493 potassium voltage-gated channel, subfamily H
           (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score = 26.9 bits (58), Expect = 6.4
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 5   AGAAESQRGKQTPAHSLEQLRRLPLP---PPQIRIR 37
           AGA +++ G   P  +LE LR  P+P   PP +  R
Sbjct: 788 AGALKAEAGPSAPPRALEGLRLPPMPWNVPPDLSPR 823


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,554,049
Number of Sequences: 37866
Number of extensions: 283104
Number of successful extensions: 772
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 765
Number of HSP's gapped (non-prelim): 11
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.