Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 32454746

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32454746 origin recognition complex subunit 4 [Homo sapiens]
         (436 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32454748 origin recognition complex subunit 4 [Homo sapiens]       862   0.0  
gi|32454746 origin recognition complex subunit 4 [Homo sapiens]       862   0.0  
gi|32454750 origin recognition complex subunit 4 [Homo sapiens]       862   0.0  
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]       44   3e-04
gi|4502703 cell division cycle 6 protein [Homo sapiens]                37   0.046
gi|149363638 septin 8 isoform c [Homo sapiens]                         33   0.39 
gi|149363689 septin 8 isoform a [Homo sapiens]                         33   0.39 
gi|149363661 septin 8 isoform b [Homo sapiens]                         33   0.39 
gi|38505213 YTH domain containing 2 [Homo sapiens]                     33   0.51 
gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens]         31   1.9  
gi|54792138 helicase with zinc finger domain [Homo sapiens]            31   1.9  
gi|7242140 ClpX caseinolytic protease X homolog [Homo sapiens]         31   1.9  
gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]          31   1.9  
gi|27262622 neuron navigator 1 [Homo sapiens]                          31   1.9  
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa...    30   4.3  
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap...    30   4.3  
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap...    30   4.3  
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]            30   4.3  
gi|5031767 heat shock transcription factor 1 [Homo sapiens]            30   5.6  
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap...    30   5.6  
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]    30   5.6  
gi|38327572 serine/threonine protein kinase 6 [Homo sapiens]           29   7.3  
gi|38327570 serine/threonine protein kinase 6 [Homo sapiens]           29   7.3  
gi|38327568 serine/threonine protein kinase 6 [Homo sapiens]           29   7.3  
gi|38327566 serine/threonine protein kinase 6 [Homo sapiens]           29   7.3  
gi|38327564 serine/threonine protein kinase 6 [Homo sapiens]           29   7.3  
gi|38327562 serine/threonine protein kinase 6 [Homo sapiens]           29   7.3  
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      29   7.3  
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      29   7.3  
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      29   7.3  

>gi|32454748 origin recognition complex subunit 4 [Homo sapiens]
          Length = 436

 Score =  862 bits (2227), Expect = 0.0
 Identities = 436/436 (100%), Positives = 436/436 (100%)

Query: 1   MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
           MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
Sbjct: 1   MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60

Query: 61  NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
           NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
Sbjct: 61  NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120

Query: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
           ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
Sbjct: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180

Query: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
           QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
Sbjct: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240

Query: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
           PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
Sbjct: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300

Query: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
           DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
Sbjct: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360

Query: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
           AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
Sbjct: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420

Query: 421 CPTDVRQWATSSLSWL 436
           CPTDVRQWATSSLSWL
Sbjct: 421 CPTDVRQWATSSLSWL 436


>gi|32454746 origin recognition complex subunit 4 [Homo sapiens]
          Length = 436

 Score =  862 bits (2227), Expect = 0.0
 Identities = 436/436 (100%), Positives = 436/436 (100%)

Query: 1   MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
           MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
Sbjct: 1   MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60

Query: 61  NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
           NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
Sbjct: 61  NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120

Query: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
           ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
Sbjct: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180

Query: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
           QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
Sbjct: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240

Query: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
           PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
Sbjct: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300

Query: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
           DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
Sbjct: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360

Query: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
           AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
Sbjct: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420

Query: 421 CPTDVRQWATSSLSWL 436
           CPTDVRQWATSSLSWL
Sbjct: 421 CPTDVRQWATSSLSWL 436


>gi|32454750 origin recognition complex subunit 4 [Homo sapiens]
          Length = 436

 Score =  862 bits (2227), Expect = 0.0
 Identities = 436/436 (100%), Positives = 436/436 (100%)

Query: 1   MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
           MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
Sbjct: 1   MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60

Query: 61  NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
           NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
Sbjct: 61  NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120

Query: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
           ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
Sbjct: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180

Query: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
           QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
Sbjct: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240

Query: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
           PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
Sbjct: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300

Query: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
           DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
Sbjct: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360

Query: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
           AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
Sbjct: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420

Query: 421 CPTDVRQWATSSLSWL 436
           CPTDVRQWATSSLSWL
Sbjct: 421 CPTDVRQWATSSLSWL 436


>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
          Length = 861

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 43  QYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSE--NVLQVHLN 100
           +++ +   ++   L      + I G  G+GKT  ++  ++ L +  + ++      + +N
Sbjct: 510 EFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVN 569

Query: 101 GLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP---VIFI 157
           G+          +I     L+ + G K   + A  L      L K   T   P    + +
Sbjct: 570 GMKLTEPHQVYVQI-----LQKLTGQKATANHAAEL------LAKQFCTRGSPQETTVLL 618

Query: 158 LDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILE-LLEKRVKSRFSHRQIH 216
           +DE DL   HK Q ++YNLFD     +  + V+ +   +D+ E ++  RV SR    ++ 
Sbjct: 619 VDELDLLWTHK-QDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRM- 676

Query: 217 LMNSFGFPQYVKIFKEQLSLPAEFPD 242
               + + Q  +I + +L     F D
Sbjct: 677 CFQPYTYSQLQQILRSRLKHLKAFED 702


>gi|4502703 cell division cycle 6 protein [Homo sapiens]
          Length = 560

 Score = 36.6 bits (83), Expect = 0.046
 Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 29/177 (16%)

Query: 59  ESNSVLIIGPRGSGKTMLINHAL----KELMEIEEVSENVLQVHLNGLL--QINDKIALK 112
           ++ S+ + G  G+GKT  ++  L    KEL   + +  N + +     +   I  +I  +
Sbjct: 194 KAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIAQEICQE 253

Query: 113 EITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP-VIFILDEFDLFAHHKNQT 171
           E++R    +                 ++  L+K       P ++ +LDE D     K Q 
Sbjct: 254 EVSRPAGKD-----------------MMRKLEKHMTAEKGPMIVLVLDEMDQL-DSKGQD 295

Query: 172 LLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVK 228
           +LY LF+    + + + +IG+   LD+ + +  R+++R   +   L+N   FP Y +
Sbjct: 296 VLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKP-QLLN---FPPYTR 348


>gi|149363638 septin 8 isoform c [Homo sapiens]
          Length = 442

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 26 ERF--CRQSPHSNLFGVQVQYKHL-SELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
          ERF      P S   G  V +  L  +L+ ++   G S ++L +G  G GK+ L+N    
Sbjct: 7  ERFSNAEPEPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFN 66

Query: 83 ELMEIEEVSENVLQVHL 99
             E EE S +   V L
Sbjct: 67 TTFETEEASHHEACVRL 83


>gi|149363689 septin 8 isoform a [Homo sapiens]
          Length = 483

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 26 ERF--CRQSPHSNLFGVQVQYKHL-SELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
          ERF      P S   G  V +  L  +L+ ++   G S ++L +G  G GK+ L+N    
Sbjct: 7  ERFSNAEPEPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFN 66

Query: 83 ELMEIEEVSENVLQVHL 99
             E EE S +   V L
Sbjct: 67 TTFETEEASHHEACVRL 83


>gi|149363661 septin 8 isoform b [Homo sapiens]
          Length = 429

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 26 ERF--CRQSPHSNLFGVQVQYKHL-SELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
          ERF      P S   G  V +  L  +L+ ++   G S ++L +G  G GK+ L+N    
Sbjct: 7  ERFSNAEPEPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFN 66

Query: 83 ELMEIEEVSENVLQVHL 99
             E EE S +   V L
Sbjct: 67 TTFETEEASHHEACVRL 83


>gi|38505213 YTH domain containing 2 [Homo sapiens]
          Length = 1430

 Score = 33.1 bits (74), Expect = 0.51
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 28/157 (17%)

Query: 59  ESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVL-------QVHLNGLLQINDKIAL 111
           E+  VLI+G  GSGKT  I   L     +++  +N +       Q      + + +++A 
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFL-----LDDCFKNGIPCRIFCTQPRRLAAIAVAERVAA 262

Query: 112 KEITR-------QLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF 164
           +   R       Q+ LE+ V  K   +F  N   LL  L  GD T S     I+DE    
Sbjct: 263 ERRERIGQTIGYQIRLESRVSPKTLLTFCTN-GVLLRTLMAGDSTLSTVTHVIVDE---- 317

Query: 165 AHHKNQ---TLLYNLFDISQSAQTPIAVIGLTCRLDI 198
            H +++    LL  L D+ Q   T + +I  +  LD+
Sbjct: 318 VHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDV 353


>gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)

Query: 24  LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
           L+E+         L    +   ++S LLK   L       ++ GP G+GKT L N   + 
Sbjct: 204 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 256

Query: 84  LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
           L+E    EV+E ++           D ++ L  +  Q++ E  +GD       ++LS
Sbjct: 257 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 313


>gi|54792138 helicase with zinc finger domain [Homo sapiens]
          Length = 1942

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/27 (48%), Positives = 20/27 (74%)

Query: 63  VLIIGPRGSGKTMLINHALKELMEIEE 89
           VLIIGP G+GKT  +  A+K +++ +E
Sbjct: 664 VLIIGPYGTGKTFTLAQAVKHILQQQE 690


>gi|7242140 ClpX caseinolytic protease X homolog [Homo sapiens]
          Length = 633

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 11/56 (19%)

Query: 32  SPHSNLFGVQVQY---------KHLSELLKRTA--LHGESNSVLIIGPRGSGKTML 76
           SPH N  G  +Q          K   E+L  +   +  E +++L++GP GSGKT+L
Sbjct: 247 SPHGNALGASMQQQVNQQIPQEKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLL 302


>gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]
          Length = 4646

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 59   ESNSVLIIGPRGSGKTMLINHALKELMEIEEVSEN 93
            E   +++ GP GSGKTM +  AL+ L ++E V  N
Sbjct: 2587 EHKPLVLCGPPGSGKTMTLFSALRALPDMEVVGLN 2621


>gi|27262622 neuron navigator 1 [Homo sapiens]
          Length = 1874

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)

Query: 24   LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
            L+E+         L    +   ++S LLK   L       ++ GP G+GKT L N   + 
Sbjct: 1519 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 1571

Query: 84   LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
            L+E    EV+E ++           D ++ L  +  Q++ E  +GD       ++LS
Sbjct: 1572 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 1628


>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
           sapiens]
          Length = 676

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 340 EEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREY 399
           EE  FN  MV  +F K ++ K   ++  +K V   A  H   LEL   +     N++   
Sbjct: 268 EEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEI--NTEINQ 325

Query: 400 QLMKLLLDNTQIMNALQKY 418
            + K ++ N  I   L  Y
Sbjct: 326 LIEKKMMRNEPIEGKLSLY 344


>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
           sapiens]
          Length = 431

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 340 EEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREY 399
           EE  FN  MV  +F K ++ K   ++  +K V   A  H   LEL   +     N++   
Sbjct: 268 EEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEI--NTEINQ 325

Query: 400 QLMKLLLDNTQIMNALQKY 418
            + K ++ N  I   L  Y
Sbjct: 326 LIEKKMMRNEPIEGKLSLY 344


>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
           sapiens]
          Length = 676

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 340 EEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREY 399
           EE  FN  MV  +F K ++ K   ++  +K V   A  H   LEL   +     N++   
Sbjct: 268 EEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEI--NTEINQ 325

Query: 400 QLMKLLLDNTQIMNALQKY 418
            + K ++ N  I   L  Y
Sbjct: 326 LIEKKMMRNEPIEGKLSLY 344


>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
          Length = 4265

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 42   VQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVS 91
            VQ  HL ++L           VL IGP G+GKT+ I+  L + + ++ +S
Sbjct: 2207 VQMSHLLDMLLTN-----KKPVLCIGPTGTGKTLTISDKLLKNLALDYIS 2251


>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
          Length = 529

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 28/161 (17%)

Query: 200 ELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSED 259
           E+L K  K       +  +N +GF + V I +  L  P         E+ +   Q+    
Sbjct: 55  EVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKP---------ERDDTEFQHPCFL 105

Query: 260 RSVQEVLQKHFNISKNLRSLHMLLMLALN-RVTASHPFMTAVDLMEASQLCSMDSKANIV 318
           R  +++L+   NI + + S+  L    +  R  +    +T V LM+  Q C MDSK    
Sbjct: 106 RGQEQLLE---NIKRKVTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQEC-MDSK---- 157

Query: 319 HGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQR 359
                     ++AMKH N+    E  + +  + + QK V +
Sbjct: 158 ----------LLAMKHENEALWREVASLRQKHAQQQKVVNK 188


>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
           sapiens]
          Length = 1116

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)

Query: 23  ILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
           +L+E    +   + +   +V    L    K T L+ ++  +  +      +   I H LK
Sbjct: 505 VLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEI-HDLK 563

Query: 83  ELMEIEEVSENVLQVHLNGLL-QINDK----IALKEITRQLNLENVVGDKVFGSFAENLS 137
           ++++++E   NVLQ  +  L  Q+ DK     +LKE  + L  +    D         L+
Sbjct: 564 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTA-------LT 616

Query: 138 FLLEALKKGDRT 149
            L EAL + +RT
Sbjct: 617 TLEEALAEKERT 628


>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
          Length = 1088

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)

Query: 23  ILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
           +L+E    +   + +   +V    L    K T L+ ++  +  +      +   I H LK
Sbjct: 477 VLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEI-HDLK 535

Query: 83  ELMEIEEVSENVLQVHLNGLL-QINDK----IALKEITRQLNLENVVGDKVFGSFAENLS 137
           ++++++E   NVLQ  +  L  Q+ DK     +LKE  + L  +    D         L+
Sbjct: 536 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTA-------LT 588

Query: 138 FLLEALKKGDRT 149
            L EAL + +RT
Sbjct: 589 TLEEALAEKERT 600


>gi|38327572 serine/threonine protein kinase 6 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
           +A  + +  KPV  +  + LQ   +  P+ R   N+Q+  Q +    +N        K  
Sbjct: 60  QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119

Query: 420 NCPTDVRQWA 429
           N  +  RQWA
Sbjct: 120 NEESKKRQWA 129


>gi|38327570 serine/threonine protein kinase 6 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
           +A  + +  KPV  +  + LQ   +  P+ R   N+Q+  Q +    +N        K  
Sbjct: 60  QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119

Query: 420 NCPTDVRQWA 429
           N  +  RQWA
Sbjct: 120 NEESKKRQWA 129


>gi|38327568 serine/threonine protein kinase 6 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
           +A  + +  KPV  +  + LQ   +  P+ R   N+Q+  Q +    +N        K  
Sbjct: 60  QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119

Query: 420 NCPTDVRQWA 429
           N  +  RQWA
Sbjct: 120 NEESKKRQWA 129


>gi|38327566 serine/threonine protein kinase 6 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
           +A  + +  KPV  +  + LQ   +  P+ R   N+Q+  Q +    +N        K  
Sbjct: 60  QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119

Query: 420 NCPTDVRQWA 429
           N  +  RQWA
Sbjct: 120 NEESKKRQWA 129


>gi|38327564 serine/threonine protein kinase 6 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
           +A  + +  KPV  +  + LQ   +  P+ R   N+Q+  Q +    +N        K  
Sbjct: 60  QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119

Query: 420 NCPTDVRQWA 429
           N  +  RQWA
Sbjct: 120 NEESKKRQWA 129


>gi|38327562 serine/threonine protein kinase 6 [Homo sapiens]
          Length = 403

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
           +A  + +  KPV  +  + LQ   +  P+ R   N+Q+  Q +    +N        K  
Sbjct: 60  QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119

Query: 420 NCPTDVRQWA 429
           N  +  RQWA
Sbjct: 120 NEESKKRQWA 129


>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1723

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 315 ANIVHGL--SVLEICLIIAM--------KHLNDIYEEEPFNFQMVYNEFQKFVQR-KAHS 363
           A I+H    S  +ICL +A         K +N+I + E F+F          V   KA  
Sbjct: 838 AKIIHHYVSSCQDICLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLTSIIVAVIKAEP 897

Query: 364 VYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQ 396
             N   PV   A E L  L  +KP   T  NS+
Sbjct: 898 TDNLVSPVRALAMEALSHLSKLKPFYSTEENSE 930


>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1706

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 315 ANIVHGL--SVLEICLIIAM--------KHLNDIYEEEPFNFQMVYNEFQKFVQR-KAHS 363
           A I+H    S  +ICL +A         K +N+I + E F+F          V   KA  
Sbjct: 835 AKIIHHYVSSCQDICLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLTSIIVAVIKAEP 894

Query: 364 VYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQ 396
             N   PV   A E L  L  +KP   T  NS+
Sbjct: 895 TDNLVSPVRALAMEALSHLSKLKPFYSTEENSE 927


>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1710

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 315 ANIVHGL--SVLEICLIIAM--------KHLNDIYEEEPFNFQMVYNEFQKFVQR-KAHS 363
           A I+H    S  +ICL +A         K +N+I + E F+F          V   KA  
Sbjct: 835 AKIIHHYVSSCQDICLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLTSIIVAVIKAEP 894

Query: 364 VYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQ 396
             N   PV   A E L  L  +KP   T  NS+
Sbjct: 895 TDNLVSPVRALAMEALSHLSKLKPFYSTEENSE 927


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,397,468
Number of Sequences: 37866
Number of extensions: 572291
Number of successful extensions: 1856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1834
Number of HSP's gapped (non-prelim): 47
length of query: 436
length of database: 18,247,518
effective HSP length: 105
effective length of query: 331
effective length of database: 14,271,588
effective search space: 4723895628
effective search space used: 4723895628
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press