Guide to the Human Genome
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Search of human proteins with 32401447

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32401447 solute carrier family 46, member 3 isoform a [Homo
sapiens]
         (461 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32401447 solute carrier family 46, member 3 isoform a [Homo s...   921   0.0  
gi|209571533 solute carrier family 46, member 3 isoform b [Homo ...   921   0.0  
gi|31543204 proton-coupled folate transporter [Homo sapiens]          223   3e-58
gi|223029454 solute carrier family 46, member 2 [Homo sapiens]        160   2e-39
gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens]      40   0.004
gi|217416366 major facilitator superfamily domain containing 9 [...    35   0.14 
gi|39753965 hippocampus abundant transcript 1 [Homo sapiens]           35   0.14 
gi|47933389 solute carrier family 2, member 9 protein isoform 2 ...    33   0.54 
gi|47933387 solute carrier family 2, member 9 protein isoform 1 ...    33   0.54 
gi|22748751 solute carrier family 43, member 2 [Homo sapiens]          33   0.71 
gi|4557803 Niemann-Pick disease, type C1 precursor [Homo sapiens]      32   1.2  
gi|45504369 solute carrier family 24, member 5 [Homo sapiens]          32   1.6  
gi|45269141 multimerin 1 [Homo sapiens]                                31   2.7  
gi|24497490 solute carrier family 22 member 4 [Homo sapiens]           30   3.5  
gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens]            30   4.6  
gi|38683836 CD47 antigen isoform 2 precursor [Homo sapiens]            30   4.6  
gi|4502673 CD47 antigen isoform 1 precursor [Homo sapiens]             30   4.6  
gi|4507011 glucose transporter 4 [Homo sapiens]                        30   6.0  
gi|239748531 PREDICTED: similar to hCG1820960 [Homo sapiens]           30   6.0  
gi|52317194 olfactory receptor, family 2, subfamily D, member 3 ...    30   6.0  

>gi|32401447 solute carrier family 46, member 3 isoform a [Homo
           sapiens]
          Length = 461

 Score =  921 bits (2381), Expect = 0.0
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60
           MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA
Sbjct: 1   MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60

Query: 61  FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120
           FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL
Sbjct: 61  FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120

Query: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180
           LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT
Sbjct: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180

Query: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240
           GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN
Sbjct: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240

Query: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300
           LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG
Sbjct: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300

Query: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360
           SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF
Sbjct: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360

Query: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420
           TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL
Sbjct: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420

Query: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR 461
           LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR
Sbjct: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR 461


>gi|209571533 solute carrier family 46, member 3 isoform b [Homo
           sapiens]
          Length = 463

 Score =  921 bits (2381), Expect = 0.0
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60
           MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA
Sbjct: 1   MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60

Query: 61  FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120
           FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL
Sbjct: 61  FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120

Query: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180
           LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT
Sbjct: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180

Query: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240
           GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN
Sbjct: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240

Query: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300
           LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG
Sbjct: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300

Query: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360
           SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF
Sbjct: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360

Query: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420
           TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL
Sbjct: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420

Query: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR 461
           LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR
Sbjct: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR 461


>gi|31543204 proton-coupled folate transporter [Homo sapiens]
          Length = 459

 Score =  223 bits (568), Expect = 3e-58
 Identities = 146/431 (33%), Positives = 221/431 (51%), Gaps = 22/431 (5%)

Query: 6   VEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEV 65
           VEP +FL+ FA+ L GPLTTQY++ R   + G   ++       C    + P     +EV
Sbjct: 25  VEPLVFLANFALVLQGPLTTQYLWHRFSADLG---YNGTRQRGGCSNRSADPTM---QEV 78

Query: 66  QKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFA 125
           +   S + L M++ G + GL S+ +L + SD  GR+  ++L+S+G L  +    L+  F 
Sbjct: 79  ETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQA----LVSVFV 134

Query: 126 FPFQLLIASTFIG----AFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTG 181
              QL +    +G    A  G++     A FA + D     + +T R+A+++  +G+   
Sbjct: 135 VQLQLHVGYFVLGRILCALLGDFGGLLAASFASVAD-VSSSRSRTFRMALLEASIGVAGM 193

Query: 182 LTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNV-TMSCSEGFKN 240
           L  L  G+++R  G+   F +    L    +Y  F  G+ +KE  S  + T         
Sbjct: 194 LASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQ 253

Query: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300
           L+          S K   L  L +F VIT  F   G   I  LYEL +PLCW+   IGYG
Sbjct: 254 LYVAPA---PEKSRKHLALYSLAIFVVITVHF---GAQDILTLYELSTPLCWDSKLIGYG 307

Query: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360
           SA     +LTS L + L  YC+ D  +A IG+   + GM + AFA+ T +MF        
Sbjct: 308 SAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFL 367

Query: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420
           ++V   V+R+ LSK+VR TEQG LF+ +A + +L  +TA   FN +Y AT+ +  GF FL
Sbjct: 368 SLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFMKGFPFL 427

Query: 421 LSAGLLLLPAI 431
           L AGLLL+PA+
Sbjct: 428 LGAGLLLIPAV 438


>gi|223029454 solute carrier family 46, member 2 [Homo sapiens]
          Length = 475

 Score =  160 bits (406), Expect = 2e-39
 Identities = 112/401 (27%), Positives = 193/401 (48%), Gaps = 22/401 (5%)

Query: 56  SPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATS 115
           SP  A +++ Q+ +S F +  ++   +  L+S + L  +SD Y RK  + +S +G L + 
Sbjct: 61  SPRGALEDQQQRAISNFYIIYNLVVGLSPLLSAYGLGWLSDRYHRKISICMSLLGFLLSR 120

Query: 116 VWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFL 175
           + L L     +P ++L  +  +    G ++ FW    A +        ++++R+ +ID +
Sbjct: 121 LGLLLKVLLDWPVEVLYGAAALNGLFGGFSAFWSGVMA-LGSLGSSEGRRSVRLILIDLM 179

Query: 176 LGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVN-----LIYILFFLGDP--VKECSSQ 228
           LGL      ++SG+  +++       +I  + +V+     L+Y L  L  P  V + S +
Sbjct: 180 LGLAGFCGSMASGHLFKQMAGHSGQGLILTACSVSCASFALLYSLLVLKVPESVAKPSQE 239

Query: 229 NVTMSCSEGFKNLFYRT---------YMLFKNAS-GK---RRFLLCLLLFTVITYFFVVI 275
              +    G     YRT         Y +    S GK    +  + LL    I Y   V+
Sbjct: 240 LPAVDTVSGTVGT-YRTLDPDQLDQQYAVGHPPSPGKAKPHKTTIALLFVGAIIYDLAVV 298

Query: 276 GIAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTT 335
           G   +  L+ L  PL WN+V +GYG A G   F+TSFLG+ +FS C  D  M  IG+ + 
Sbjct: 299 GTVDVIPLFVLREPLGWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSF 358

Query: 336 MTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLG 395
            +G  + AF   T M ++AR   LF ++P + +RS +SK+++ +  G +F  +     L 
Sbjct: 359 GSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALT 418

Query: 396 GVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVV 436
           GV   + +N IY  T+  + G  F LS+ L  L  I + +V
Sbjct: 419 GVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAIIPISIV 459


>gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens]
          Length = 506

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 53/327 (16%)

Query: 78  ISGLIPGLVSTFILLS------ISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLL 131
           ++GLI G+      LS      +SD +GRK P +L +V             +  FP  L+
Sbjct: 81  MNGLIQGVKGLLSFLSAPLIGALSDVWGRK-PFLLGTV------------FFTCFPIPLM 127

Query: 132 IASTF----IGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAI-IDFLLGLVTGLTGLS 186
             S +    + +  G ++  +   FAY+ D  +EH++ T    +   F   LV+  +   
Sbjct: 128 RISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVS--SPAI 185

Query: 187 SGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTY 246
             Y     G     L++ V+  V L+ I F L           V  S  E  + + +   
Sbjct: 186 GAYLSASYG---DSLVVLVATVVALLDICFIL---------VAVPESLPEKMRPVSWGAQ 233

Query: 247 MLFKNAS--------GKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIG 298
           + +K A         GK   +L L+  TV   +    G    F LY L   + +  V I 
Sbjct: 234 ISWKQADPFASLKKVGKDSTVL-LICITVFLSYLPEAGQYSSFFLY-LRQVIGFGSVKIA 291

Query: 299 -YGSALGSASFL--TSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLAR 355
            + + +G  S +  T+FL I + S  + + +   +G+   M  +A   F S   MM+ A 
Sbjct: 292 AFIAMVGILSIVAQTAFLSILMRS--LGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAG 349

Query: 356 VPFLFTIVPFSVLRSMLSKVVRSTEQG 382
                + + F  + +++S+   S +QG
Sbjct: 350 TVAAMSSITFPAISALVSRNAESDQQG 376


>gi|217416366 major facilitator superfamily domain containing 9
           [Homo sapiens]
          Length = 474

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 12/149 (8%)

Query: 252 ASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELD---SPLCWNEVFIGYGSALGSASF 308
           A G RRFLLCL L   +  F V + + P+  L+      SP     V   YG       F
Sbjct: 39  AVGARRFLLCLYLVGFLDLFGVSM-VVPLLSLHVKSLGASPTVAGIVGSSYGIL---QLF 94

Query: 309 LTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVL 368
            ++ +G W  S  +         I  +  G  +   A+   +  LARVP        S+ 
Sbjct: 95  SSTLVGCW--SDVVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSIS 152

Query: 369 RSMLSKVVRSTEQGTLFACIAFLETLGGV 397
           R++LS VV   E+  +   I    T  GV
Sbjct: 153 RALLSDVVPEKERPLV---IGHFNTASGV 178


>gi|39753965 hippocampus abundant transcript 1 [Homo sapiens]
          Length = 490

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 66/330 (20%), Positives = 125/330 (37%), Gaps = 35/330 (10%)

Query: 78  ISGLIPGLVSTFILLS------ISDHYGRKFPMILS------SVGALATSVWLCLLCYFA 125
           ++GLI G+      LS      +SD +GRK  ++L+       +  +  S W     YFA
Sbjct: 73  MNGLIQGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWW----YFA 128

Query: 126 FPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQK-TIRIAIIDFLLGLVTGLTG 184
                      + +  G +   +   FAY+ D  +EH++     +    F   LVT  + 
Sbjct: 129 -----------VISVSGVFAVTFSVVFAYVADITQEHERSMAYGLVSATFAASLVT--SP 175

Query: 185 LSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYR 244
               Y  R  G     L++ ++ A+ L+ I F L   V E   + +    S G    + +
Sbjct: 176 AIGAYLGRVYG---DSLVVVLATAIALLDICFIL-VAVPESLPEKM-RPASWGAPISWEQ 230

Query: 245 TYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALG 304
                      +  ++ L+  TV   +    G    F LY         E    + + LG
Sbjct: 231 ADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLG 290

Query: 305 SASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVP 364
             S +   + + L    + + +   +G+   +  +A   F S   MM+ A      + + 
Sbjct: 291 ILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMMWAAGAVAAMSSIT 350

Query: 365 FSVLRSMLSKVVRSTEQGTLFACIAFLETL 394
           F  + +++S+   + +QG +   I  +  L
Sbjct: 351 FPAVSALVSRTADADQQGVVQGMITGIRGL 380


>gi|47933389 solute carrier family 2, member 9 protein isoform 2
           [Homo sapiens]
          Length = 511

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 16/147 (10%)

Query: 82  IPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYF-AFPFQLLIASTFIGAF 140
           I GLV T I+  I    GRK  ++ ++    A S  L + C   A  F++LI   FI   
Sbjct: 90  IGGLVGTLIVKMIGKVLGRKHTLLANN--GFAISAALLMACSLQAGAFEMLIVGRFIMGI 147

Query: 141 CGNYTTFWGACFAYIVDQCKEHKQKTIR-----IAIIDFLLGLVTG-LTGLSSGYFIREL 194
            G      G   + +     E   K IR     +  I   +G+ TG L GL      +E 
Sbjct: 148 DG------GVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPE-LLGKES 200

Query: 195 GFEWSFLIIAVSLAVNLIYILFFLGDP 221
            + + F +I V   V L+ + F    P
Sbjct: 201 TWPYLFGVIVVPAVVQLLSLPFLPDSP 227


>gi|47933387 solute carrier family 2, member 9 protein isoform 1
           [Homo sapiens]
          Length = 540

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 16/147 (10%)

Query: 82  IPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYF-AFPFQLLIASTFIGAF 140
           I GLV T I+  I    GRK  ++ ++    A S  L + C   A  F++LI   FI   
Sbjct: 119 IGGLVGTLIVKMIGKVLGRKHTLLANN--GFAISAALLMACSLQAGAFEMLIVGRFIMGI 176

Query: 141 CGNYTTFWGACFAYIVDQCKEHKQKTIR-----IAIIDFLLGLVTG-LTGLSSGYFIREL 194
            G      G   + +     E   K IR     +  I   +G+ TG L GL      +E 
Sbjct: 177 DG------GVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPE-LLGKES 229

Query: 195 GFEWSFLIIAVSLAVNLIYILFFLGDP 221
            + + F +I V   V L+ + F    P
Sbjct: 230 TWPYLFGVIVVPAVVQLLSLPFLPDSP 256


>gi|22748751 solute carrier family 43, member 2 [Homo sapiens]
          Length = 569

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%)

Query: 340 AMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRS---TEQGTLFACIAFLETLGG 396
           AM AFA T L++    V  L   +P  +L  +L  +VR    +  G L+A +      G 
Sbjct: 424 AMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGS 483

Query: 397 VTAVSTF---------NGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYE 447
           +T + +            ++ A +    G    ++ GLLLL  +  C+           E
Sbjct: 484 LTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRRQLE 543

Query: 448 LLIQEESSED 457
             +Q+   +D
Sbjct: 544 RQLQQRQEDD 553


>gi|4557803 Niemann-Pick disease, type C1 precursor [Homo sapiens]
          Length = 1278

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 32/199 (16%)

Query: 203 IAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFL--- 259
           + +S A+  +YI   LG  +K C    V    S G   +     +L   A     F    
Sbjct: 624 VVISYAIMFLYISLALGH-IKSCRRLLVDSKVSLGIAGILI---VLSSVACSLGVFSYIG 679

Query: 260 --LCLLLFTVITYFFVVIGIAPIFIL---YELDSPLCWNEVFIGYGSALGSAS---FLTS 311
             L L++  VI +  + +G+  IFIL   Y+ D  L    +    G  LG  +   FL+S
Sbjct: 680 LPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSS 739

Query: 312 FLGIWLFSYCMEDIHMAFIGIFTTMTGM-AMTAFASTTLMM-FLARVPFLFTIVPFSVLR 369
           F     F          F+G  + M  +   + FA   + + FL ++    +++   + R
Sbjct: 740 FSETVAF----------FLGALSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDIKR 789

Query: 370 SMLSKV-----VRSTEQGT 383
              +++     VR  E GT
Sbjct: 790 QEKNRLDIFCCVRGAEDGT 808


>gi|45504369 solute carrier family 24, member 5 [Homo sapiens]
          Length = 500

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 26/168 (15%)

Query: 262 LLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYC 321
           ++ F +I Y F+ I I  +   Y L S    +E  +G    +   +F+ +          
Sbjct: 70  IIYFLIIVYMFMAISI--VCDEYFLPSLEIISES-LGLSQDVAGTTFMAA-------GSS 119

Query: 322 MEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQ 381
             ++  AF+G+F T   + ++    + +          + ++       +LS  V +   
Sbjct: 120 APELVTAFLGVFITKGDIGISTILGSAI----------YNLLGICAACGLLSNTVSTLSC 169

Query: 382 GTLFA-CIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLL 428
             LF  C A+      ++A +    IY   V WY G   LL  GL +L
Sbjct: 170 WPLFRDCAAYT-----ISAAAVLGIIYDNQVYWYEGALLLLIYGLYVL 212


>gi|45269141 multimerin 1 [Homo sapiens]
          Length = 1228

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 286  LDSPLCWNEVFIGYGSALG--SASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTA 343
            +  P+ +N + + YG++    +  F   +LG+++F Y +E    A I  F  + G+   A
Sbjct: 1113 IPGPILFNNLDVNYGASYTPRTGKFRIPYLGVYVFKYTIESF-SAHISGFLVVDGIDKLA 1171

Query: 344  FASTTL 349
            F S  +
Sbjct: 1172 FESENI 1177


>gi|24497490 solute carrier family 22 member 4 [Homo sapiens]
          Length = 551

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 186 SSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRT 245
           S   ++  +  EW+ L+   +  V L   LFF+G  V   S  +  +S   G KN+ + T
Sbjct: 120 SQDVYLSTVVTEWN-LVCEDNWKVPLTTSLFFVG--VLLGSFVSGQLSDRFGRKNVLFAT 176

Query: 246 YMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPI---FILYELDSPLCWNEVFIGYGSA 302
             +    S  + F +   +FTV+   FV++G+  I    + + L + +    V I + + 
Sbjct: 177 MAVQTGFSFLQIFSISWEMFTVL---FVIVGMGQISNYVVAFILGTEILGKSVRIIFSTL 233

Query: 303 LGSASFLTSFLGIWLFSYCMEDIHMAFIGI 332
                F   ++ + LF+Y + D  M  + +
Sbjct: 234 GVCTFFAVGYMLLPLFAYFIRDWRMLLLAL 263


>gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens]
          Length = 312

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252
           E +  ++   L + +I I+  +     E S +N T    +  S G   L +  Y +F  A
Sbjct: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231

Query: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278
            G   F++ +L+  VI Y   V+G++
Sbjct: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257


>gi|38683836 CD47 antigen isoform 2 precursor [Homo sapiens]
          Length = 305

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252
           E +  ++   L + +I I+  +     E S +N T    +  S G   L +  Y +F  A
Sbjct: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231

Query: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278
            G   F++ +L+  VI Y   V+G++
Sbjct: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257


>gi|4502673 CD47 antigen isoform 1 precursor [Homo sapiens]
          Length = 323

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252
           E +  ++   L + +I I+  +     E S +N T    +  S G   L +  Y +F  A
Sbjct: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231

Query: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278
            G   F++ +L+  VI Y   V+G++
Sbjct: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257


>gi|4507011 glucose transporter 4 [Homo sapiens]
          Length = 509

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 82  IPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTF-IGAF 140
           + G++S+F++  IS   GRK  M++++V A+     L  L   A  +++LI   F IGA+
Sbjct: 90  VGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGGS-LMGLANAAASYEMLILGRFLIGAY 148

Query: 141 CG 142
            G
Sbjct: 149 SG 150


>gi|239748531 PREDICTED: similar to hCG1820960 [Homo sapiens]
          Length = 86

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)

Query: 273 VVIGIAPIFILYELDSPLCWNEVF 296
           +V G AP+FIL+E D PL ++E +
Sbjct: 1   MVCGYAPLFILFEKDPPLMFSEEY 24


>gi|52317194 olfactory receptor, family 2, subfamily D, member 3
           [Homo sapiens]
          Length = 330

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 5/159 (3%)

Query: 235 SEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNE 294
           S G +N  + +  +F   S   +  + L +  +I Y   V+G   I IL  LDS L    
Sbjct: 16  SMGEENQTFVSKFIFLGLSQDLQTQILLFILFLIIYLLTVLGNQLIIILIFLDSRLHTPM 75

Query: 295 VFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLA 354
            F     +     F TS +   L  + ++   ++F G  T +    +       L+  ++
Sbjct: 76  YFFLRNLSFADLCFSTSIVPQVLVHFLVKRKTISFYGCMTQIIVFLLVGCTECALLAVMS 135

Query: 355 RVPFLFTIVPFSVLRSMLSKV-----VRSTEQGTLFACI 388
              ++    P      M  +V      RS   G L + +
Sbjct: 136 YDRYVAVCKPLYYSTIMTQRVCLWLSFRSWASGALVSLV 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.141    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,353,796
Number of Sequences: 37866
Number of extensions: 608003
Number of successful extensions: 1698
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1684
Number of HSP's gapped (non-prelim): 24
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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