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Search of human proteins with 31543099
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543099 hypothetical protein LOC92346 [Homo sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543099 hypothetical protein LOC92346 [Homo sapiens] 375 e-105
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 32 0.40
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap... 30 1.5
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens] 29 2.6
gi|197313732 pleckstrin homology-like domain, family B, member 2... 29 2.6
gi|197313730 pleckstrin homology-like domain, family B, member 2... 29 2.6
gi|197313728 pleckstrin homology-like domain, family B, member 2... 29 2.6
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 29 2.6
gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens] 28 3.4
gi|22538422 activating transcription factor 2 [Homo sapiens] 28 3.4
gi|48717285 hypothetical protein LOC389763 [Homo sapiens] 28 5.7
gi|120952764 mastermind-like domain containing 1 [Homo sapiens] 27 7.5
gi|224451131 eyes shut homolog isoform 2 [Homo sapiens] 27 7.5
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 27 7.5
gi|38093661 eyes shut homolog isoform 3 [Homo sapiens] 27 7.5
gi|23065547 glutathione S-transferase mu 1 isoform 2 [Homo sapiens] 27 9.8
gi|23065544 glutathione S-transferase mu 1 isoform 1 [Homo sapiens] 27 9.8
gi|226246533 TOX high mobility group box family member 3 isoform... 27 9.8
gi|226054295 TOX high mobility group box family member 3 isoform... 27 9.8
>gi|31543099 hypothetical protein LOC92346 [Homo sapiens]
Length = 183
Score = 375 bits (964), Expect = e-105
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MEKRELKASVPKFDKIPWLSEASLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQV 60
MEKRELKASVPKFDKIPWLSEASLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQV
Sbjct: 1 MEKRELKASVPKFDKIPWLSEASLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQV 60
Query: 61 PDVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQP 120
PDVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQP
Sbjct: 61 PDVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQP 120
Query: 121 KFQTTPEPFHDDIPTENIHYRLPILGPRTAVFHGLLTEAYKTLKERQRSSLPRKEPIGKT 180
KFQTTPEPFHDDIPTENIHYRLPILGPRTAVFHGLLTEAYKTLKERQRSSLPRKEPIGKT
Sbjct: 121 KFQTTPEPFHDDIPTENIHYRLPILGPRTAVFHGLLTEAYKTLKERQRSSLPRKEPIGKT 180
Query: 181 TRQ 183
TRQ
Sbjct: 181 TRQ 183
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 31.6 bits (70), Expect = 0.40
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 43 TFLTSSKKNMNLPILFQVPDVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDD 102
+ + +KK + ++ PDVL +N + L +L S ++ K P +K +
Sbjct: 388 SLVNQAKKETYMKLIVPSPDVLKAGNKNTSEESSLLTSELRSKREQYKQAFPSQLKKQES 447
Query: 103 PKASFENCMSYRMSLHQPKFQTTPEPFHDDIPTENIH 139
K S + ++ +L PK T+ P H EN H
Sbjct: 448 SK-SLKKVIA---ALSNPK-ATSSSPAHPKQTLENNH 479
>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo
sapiens]
Length = 4486
Score = 29.6 bits (65), Expect = 1.5
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 35 RRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQP 94
R Y T S+ N++ P+L + P+ + + N QL S +EM ++P
Sbjct: 661 RLYEDWCRTVSEKSQYNLSQPLLKRDPETK--------EITINFNPQLISVLKEMSYLEP 712
Query: 95 RTMK-IPDDPKASFENCMSYR 114
R MK +P+ A F + YR
Sbjct: 713 REMKHMPETAAAMFSSRDFYR 733
>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
Length = 861
Score = 28.9 bits (63), Expect = 2.6
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 33 LPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQCDSMLLRNQQLCS 84
LPRR P T + L SS K+ +L L +VP K R +C + +R++ L +
Sbjct: 431 LPRRAPRTVSRNLRSSLKS-SLHTLTKVPKKSLKPRTPRCAAPQIRSRSLAA 481
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 26 NKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQ 71
N L+ L R P S+TF +S ++ L IL + P+ +S+ +R+Q
Sbjct: 540 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQ 585
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 26 NKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQ 71
N L+ L R P S+TF +S ++ L IL + P+ +S+ +R+Q
Sbjct: 540 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQ 585
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 26 NKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQ 71
N L+ L R P S+TF +S ++ L IL + P+ +S+ +R+Q
Sbjct: 567 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQ 612
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 28.9 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 26 NKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQ 71
N L+ L R P S+TF +S ++ L IL + P+ +S+ +R+Q
Sbjct: 540 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQ 585
>gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens]
Length = 2458
Score = 28.5 bits (62), Expect = 3.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 110 CMSYRMSLHQPKFQTTPEPFHDDIPTENIHYRLPILGPRT-AVFHGLL 156
C+ R+ L P EPF ++P + LPILG + VFH +L
Sbjct: 956 CVVARLELDDPSKVHPAEPFTGELPAQQ---TLPILGEKLHQVFHSVL 1000
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 28.5 bits (62), Expect = 3.4
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 25/128 (19%)
Query: 38 PHTSATFLTSSKKNMNL------------PILFQVPDVLSKARRNQCDSMLLRNQQLCST 85
PH +T TS +K + L P QVP+VL + DS ++ Q + S
Sbjct: 139 PHPEST--TSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSS----DSSVIIQQAVPSP 192
Query: 86 CQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQPKFQTTPEPFHDDIPTENIHY--RLP 143
+ Q + P P + + LH P QT P I + N+H +P
Sbjct: 193 TSSTVITQAPSSNRPIVPVPG-----PFPLLLHLPNGQTMPVAIPASITSSNVHVPAAVP 247
Query: 144 ILGPRTAV 151
++ P T V
Sbjct: 248 LVRPVTMV 255
>gi|48717285 hypothetical protein LOC389763 [Homo sapiens]
Length = 1576
Score = 27.7 bits (60), Expect = 5.7
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 58 FQVPDVLSKARRN-----QCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDDPKASF-ENCM 111
F V + L RN + S L N + ST E ++ PR + +P DPK+S+ +N M
Sbjct: 1147 FPVTNALQSQTRNNLTTSKSGSCSLTNVK-ASTSNETEIFPPR-ISVPQDPKSSYLKNQM 1204
Query: 112 SYRMSLHQPKFQTTPEPFHD 131
++ L Q K F D
Sbjct: 1205 LSQLKLVQRKHSQPQSHFTD 1224
>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
Length = 774
Score = 27.3 bits (59), Expect = 7.5
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Query: 80 QQLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQPKFQTTPEPFHDDIPTENIH 139
Q L +C + T++ P A + S + P PE T+
Sbjct: 363 QSLMVSCMSSNTLSGSTLR--GSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQ-- 418
Query: 140 YRLPILGPRTAVFHGLLTEAYKTLKERQRSSLPRKEP 176
P GP++++ L++ KT + S+LP P
Sbjct: 419 ---PQFGPQSSILANLMSSTIKTPQGHLMSALPASNP 452
>gi|224451131 eyes shut homolog isoform 2 [Homo sapiens]
Length = 619
Score = 27.3 bits (59), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 62 DVLSKARRNQCDSMLLRNQQLCSTCQE 88
D+L K+ + C+S LRN C C++
Sbjct: 364 DLLCKSIQTSCESFPLRNNATCKKCEK 390
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 27.3 bits (59), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 62 DVLSKARRNQCDSMLLRNQQLCSTCQE 88
D+L K+ + C+S LRN C C++
Sbjct: 364 DLLCKSIQTSCESFPLRNNATCKKCEK 390
>gi|38093661 eyes shut homolog isoform 3 [Homo sapiens]
Length = 594
Score = 27.3 bits (59), Expect = 7.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 62 DVLSKARRNQCDSMLLRNQQLCSTCQE 88
D+L K+ + C+S LRN C C++
Sbjct: 364 DLLCKSIQTSCESFPLRNNATCKKCEK 390
>gi|23065547 glutathione S-transferase mu 1 isoform 2 [Homo sapiens]
Length = 181
Score = 26.9 bits (58), Expect = 9.8
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 31/147 (21%)
Query: 2 EKRELKASVPKFDKIPWLSEASLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVP 61
EK+ P +D+ WL+E L L P NLP L
Sbjct: 30 EKKYTMGDAPDYDRSQWLNE----KFKLGLDFP------------------NLPYLIDGA 67
Query: 62 DVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQPK 121
++++ C + R LC +E K +++ + +N M M + P+
Sbjct: 68 HKITQSNAILC--YIARKHNLCGETEEEK------IRVDILENQTMDNHMQLGMICYNPE 119
Query: 122 FQTTPEPFHDDIPTENIHYRLPILGPR 148
F+ + +++P E + LG R
Sbjct: 120 FEKLKPKYLEELP-EKLKLYSEFLGKR 145
>gi|23065544 glutathione S-transferase mu 1 isoform 1 [Homo sapiens]
Length = 218
Score = 26.9 bits (58), Expect = 9.8
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 31/147 (21%)
Query: 2 EKRELKASVPKFDKIPWLSEASLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVP 61
EK+ P +D+ WL+E L L P NLP L
Sbjct: 30 EKKYTMGDAPDYDRSQWLNE----KFKLGLDFP------------------NLPYLIDGA 67
Query: 62 DVLSKARRNQCDSMLLRNQQLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQPK 121
++++ C + R LC +E K +++ + +N M M + P+
Sbjct: 68 HKITQSNAILC--YIARKHNLCGETEEEK------IRVDILENQTMDNHMQLGMICYNPE 119
Query: 122 FQTTPEPFHDDIPTENIHYRLPILGPR 148
F+ + +++P E + LG R
Sbjct: 120 FEKLKPKYLEELP-EKLKLYSEFLGKR 145
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 26.9 bits (58), Expect = 9.8
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 23 SLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQCDSMLLRNQQL 82
S+ KPL + LP TS T + N+ P++ + + + + S ++ QQ
Sbjct: 377 SIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQH 436
Query: 83 CSTCQEMKMVQPRTMK 98
Q+ + Q + M+
Sbjct: 437 QMQLQQQQQQQQQQMQ 452
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 26.9 bits (58), Expect = 9.8
Identities = 17/76 (22%), Positives = 33/76 (43%)
Query: 23 SLVNKPLVLSLPRRYPHTSATFLTSSKKNMNLPILFQVPDVLSKARRNQCDSMLLRNQQL 82
S+ KPL + LP TS T + N+ P++ + + + + S ++ QQ
Sbjct: 382 SIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQH 441
Query: 83 CSTCQEMKMVQPRTMK 98
Q+ + Q + M+
Sbjct: 442 QMQLQQQQQQQQQQMQ 457
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,339,276
Number of Sequences: 37866
Number of extensions: 320837
Number of successful extensions: 769
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 758
Number of HSP's gapped (non-prelim): 19
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.