Guide to the Human Genome
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Name: KCNMB2 Sequence: fasta or formatted (235aa) NCBI GI: 31317295
Description:

calcium-activated potassium channel beta 2 subunit

Referenced in:

Potassium Channels

Other entries for this name:
alt mRNA [235aa] calcium-activated potassium channel beta 2 subunit
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          8           1
 C cysteine            4.7         11           1
 D aspartate           3.0          7           1
 E glutamate           5.5         13           2
 F phenylalanine       3.8          9           1
 G glycine             4.3         10           2
 H histidine           2.1          5           1
 I isoleucine          6.0         14           1
 K lysine              6.4         15           1
 L leucine            11.5         27           3
 M methionine          4.7         11           2
 N asparagine          4.7         11           1
 P proline             2.1          5           1
 Q glutamine           4.3         10           1
 R arginine            4.7         11           1
 S serine             10.2         24           3
 T threonine           6.4         15           1
 V valine              5.5         13           2
 W tryptophan          1.7          4           1
 Y tyrosine            5.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium-activated potassium channel beta 2 subunit [... 
KCNMB2                1.000   calcium-activated potassium channel beta 2 subunit [H...
KCNMB3                0.349   calcium-activated potassium channel beta 3 subunit i...
KCNMB3                0.349   calcium-activated potassium channel beta 3 subunit i...
KCNMB3                0.349   calcium-activated potassium channel beta 3 subunit i...
KCNMB3                0.349   calcium-activated potassium channel beta 3 subunit i...
KCNMB1                0.303   potassium large conductance calcium-activated channel...
KCNMB4                0.212   calcium-activated potassium channel beta 4 subunit [...
ZNF689                0.015   zinc finger protein HIT-39 
ZNF292                0.013   zinc finger protein 292 
ZAN                   0.013   zonadhesin isoform 3 
ZAN                   0.013   zonadhesin isoform 6 
SFXN4                 0.011   sideroflexin 4 
ZNF572                0.011   zinc finger protein 572 
WDR86                 0.007   WD repeat domain 86 
RASSF5                0.007   Ras association (RalGDS/AF-6) domain family 5 isofor...
RASSF5                0.007   Ras association (RalGDS/AF-6) domain family 5 isofor...
TMEM132D              0.007   transmembrane protein 132D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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