Guide to the Human Genome
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Name: KCNMB4 Sequence: fasta or formatted (210aa) NCBI GI: 26051275
Description:

calcium-activated potassium channel beta 4 subunit

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         12           1
 C cysteine            5.2         11           1
 D aspartate           3.8          8           2
 E glutamate           6.2         13           1
 F phenylalanine       5.2         11           1
 G glycine             3.8          8           1
 H histidine           2.9          6           1
 I isoleucine          4.8         10           2
 K lysine              5.2         11           2
 L leucine            11.0         23           2
 M methionine          1.4          3           1
 N asparagine          4.3          9           2
 P proline             3.8          8           2
 Q glutamine           6.2         13           2
 R arginine            3.8          8           1
 S serine              7.1         15           1
 T threonine           5.2         11           1
 V valine              9.0         19           2
 W tryptophan          1.9          4           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium-activated potassium channel beta 4 subunit [... 
KCNMB3                0.277   calcium-activated potassium channel beta 3 subunit i...
KCNMB3                0.277   calcium-activated potassium channel beta 3 subunit i...
KCNMB3                0.277   calcium-activated potassium channel beta 3 subunit i...
KCNMB3                0.277   calcium-activated potassium channel beta 3 subunit i...
KCNMB2                0.235   calcium-activated potassium channel beta 2 subunit [...
KCNMB2                0.235   calcium-activated potassium channel beta 2 subunit [H...
KCNMB1                0.058   potassium large conductance calcium-activated channel...
CASP8AP2              0.015   caspase 8 associated protein 2 
CASP8AP2              0.015   caspase 8 associated protein 2 
CASP8AP2              0.015   caspase 8 associated protein 2 
MUC5AC                0.010   mucin 5AC 
ZNF840                0.010   PREDICTED: zinc finger protein 840 
ZNF840                0.010   PREDICTED: zinc finger protein 840 
ZNF840                0.010   PREDICTED: zinc finger protein 840 
MUC5B                 0.010   mucin 5, subtype B, tracheobronchial 
C7orf63               0.007   hypothetical protein LOC79846 isoform 2 
C7orf63               0.007   hypothetical protein LOC79846 isoform 1 
TSC1                  0.007   tuberous sclerosis 1 protein isoform 1 
TSC1                  0.007   tuberous sclerosis 1 protein isoform 4 
TSC1                  0.007   tuberous sclerosis 1 protein isoform 3 
C14orf115             0.007   hypothetical protein LOC55237 
ITPR1                 0.005   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR1                 0.005   inositol 1,4,5-triphosphate receptor, type 1 isofor...
UTS2R                 0.005   urotensin 2 receptor 
SARM1                 0.005   sterile alpha and TIR motif containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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