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Search of human proteins with 30520327
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30520327 F-box protein 27 [Homo sapiens]
(283 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30520327 F-box protein 27 [Homo sapiens] 598 e-171
gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens] 336 2e-92
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens] 336 2e-92
gi|8922188 F-box only protein 6 [Homo sapiens] 199 3e-51
gi|15812198 F-box only protein 2 [Homo sapiens] 191 6e-49
gi|34878735 F-box protein 44 isoform 1 [Homo sapiens] 177 1e-44
gi|62388868 F-box protein 44 isoform 1 [Homo sapiens] 177 1e-44
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 79 3e-15
gi|34878749 F-box protein 44 isoform 2 [Homo sapiens] 66 3e-11
gi|34878753 F-box protein 44 isoform 2 [Homo sapiens] 66 3e-11
gi|27312027 F-box only protein 16 [Homo sapiens] 42 6e-04
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 40 0.002
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 40 0.002
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 40 0.002
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 40 0.002
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 40 0.002
gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [H... 37 0.015
gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens] 37 0.020
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 37 0.026
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 37 0.026
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens] 37 0.026
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 37 0.026
gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens] 36 0.033
gi|15834619 F-box only protein 4 isoform 1 [Homo sapiens] 36 0.033
gi|122937219 F-box protein 41 [Homo sapiens] 36 0.033
gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [H... 35 0.097
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 34 0.13
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 34 0.17
gi|157426875 F-box and leucine-rich repeat protein 18 [Homo sapi... 33 0.37
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 33 0.37
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 598 bits (1541), Expect = e-171
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60
MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL
Sbjct: 1 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60
Query: 61 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG 120
VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG
Sbjct: 61 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCG 120
Query: 121 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD 180
QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD
Sbjct: 121 QEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLD 180
Query: 181 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV 240
SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV
Sbjct: 181 SGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHV 240
Query: 241 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS
Sbjct: 241 FSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
Length = 287
Score = 336 bits (861), Expect = 2e-92
Identities = 164/286 (57%), Positives = 202/286 (70%), Gaps = 11/286 (3%)
Query: 1 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60
MGA +SR R+PA +P ALD LPPELL+ VLSHVPPR+L+ RCR VCR WR +
Sbjct: 10 MGARLSR---RRLPA---DPSLALDA--LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 61
Query: 61 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARP---CPLGRFCARRPIGRNLIRN 117
VDG +WLL LARD A GRAL +A+ C + C L R+C R P GRNLI N
Sbjct: 62 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 121
Query: 118 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 177
CG++G R W V+HGG+GW +E+N T VPGAPSQTCFVTSF WC K+Q++DL EG+W E
Sbjct: 122 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 181
Query: 178 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV 237
LLDS +IEICV+DWWGAR + GC+Y+L V+LLD + + KFSA PDP+ QW C V
Sbjct: 182 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 241
Query: 238 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
+HVF+N G+R+VSFE G+D W GHYGA VT+SSV VR+RLS
Sbjct: 242 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
Length = 278
Score = 336 bits (861), Expect = 2e-92
Identities = 164/286 (57%), Positives = 202/286 (70%), Gaps = 11/286 (3%)
Query: 1 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60
MGA +SR R+PA +P ALD LPPELL+ VLSHVPPR+L+ RCR VCR WR +
Sbjct: 1 MGARLSR---RRLPA---DPSLALDA--LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 52
Query: 61 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARP---CPLGRFCARRPIGRNLIRN 117
VDG +WLL LARD A GRAL +A+ C + C L R+C R P GRNLI N
Sbjct: 53 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 112
Query: 118 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 177
CG++G R W V+HGG+GW +E+N T VPGAPSQTCFVTSF WC K+Q++DL EG+W E
Sbjct: 113 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 172
Query: 178 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV 237
LLDS +IEICV+DWWGAR + GC+Y+L V+LLD + + KFSA PDP+ QW C V
Sbjct: 173 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 232
Query: 238 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
+HVF+N G+R+VSFE G+D W GHYGA VT+SSV VR+RLS
Sbjct: 233 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
>gi|8922188 F-box only protein 6 [Homo sapiens]
Length = 293
Score = 199 bits (505), Expect = 3e-51
Identities = 111/272 (40%), Positives = 152/272 (55%), Gaps = 19/272 (6%)
Query: 18 PEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHG 76
P + ALD +++LP +LL + +HVP R LL CR VC WR L+D LW R+
Sbjct: 4 PHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGF 63
Query: 77 ATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWMVQ-HGGDG 135
T + P + + F R + RNL+RNPC +E + W + +GGD
Sbjct: 64 IT--------KDWDQPVADWKI-----FYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDR 110
Query: 136 WVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDW 191
W VE + T P + FVTS+ C K Q++DL EG W ELLD+ R +I V DW
Sbjct: 111 WKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDW 170
Query: 192 WGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFV 251
+ AR D GC Y+L VQL A+ VL F P I QWNN V++ FS+ GVR++
Sbjct: 171 FAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYI 230
Query: 252 SFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
F+H G+DTQ+WAG YG RVTNSS++V +++
Sbjct: 231 LFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 191 bits (485), Expect = 6e-49
Identities = 117/285 (41%), Positives = 156/285 (54%), Gaps = 32/285 (11%)
Query: 10 AARVPAPEPEPEE-----ALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQ 64
+A PE + EE A L +LP LLL VL+ +P L+ CR VC W+ LVDG
Sbjct: 26 SAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGA 85
Query: 65 ALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGL 124
LWLL + G + R F ++R RNL+RNPCG+E L
Sbjct: 86 PLWLL-KCQQEGLVPEGGVEEERDHWQQFY---------FLSKRR--RNLLRNPCGEEDL 133
Query: 125 RKWM-VQHGGDGWVVEENRTTVPGAPS---------QTCFVTSFSWCCKKQVLDLEEEGL 174
W V+HGGDGW VEE +PG + F +SF WC K QV+DL+ EG
Sbjct: 134 EGWCDVEHGGDGWRVEE----LPGDSGVEFTHDESVKKYFASSFEWCRKAQVIDLQAEGY 189
Query: 175 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQ-WNNNA 233
W ELLD+ + I V DW+ R D+GC+Y L V+LL ++ VL +FS+ +PQ +
Sbjct: 190 WEELLDTTQPAIVVKDWYSGRSDAGCLYELTVKLLSEHENVLAEFSSGQVAVPQDSDGGG 249
Query: 234 CLHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIV 278
+ ++H F++ GVRFV FEH GQD+ +W G +GARVTNSSV V
Sbjct: 250 WMEISHTFTDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWV 294
>gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 177 bits (448), Expect = 1e-44
Identities = 102/259 (39%), Positives = 138/259 (53%), Gaps = 18/259 (6%)
Query: 25 DLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLH 84
++++LP +LL + +HVP R LL CR VC WR L+D LW R+ T
Sbjct: 5 NINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFIT------ 58
Query: 85 LARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWMVQ-HGGDGWVVEE--- 140
P + + F R + RNL+ NPC +EG W + +GGD W VE+
Sbjct: 59 --EDWDQPVADWKI-----FYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSR 111
Query: 141 -NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGARHDSG 199
R P + FVTS+ C K QV+DL+ EG W EL+D+ R +I V DW+ AR D G
Sbjct: 112 DQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCG 171
Query: 200 CMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFVSFEHRGQD 259
Y+L VQLL + L F P I Q ++ V+H FSN GVR++ F+H G D
Sbjct: 172 SKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVD 231
Query: 260 TQFWAGHYGARVTNSSVIV 278
T +WAG YG RVTNSS+ +
Sbjct: 232 THYWAGWYGPRVTNSSITI 250
>gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 177 bits (448), Expect = 1e-44
Identities = 102/259 (39%), Positives = 138/259 (53%), Gaps = 18/259 (6%)
Query: 25 DLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLH 84
++++LP +LL + +HVP R LL CR VC WR L+D LW R+ T
Sbjct: 5 NINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFIT------ 58
Query: 85 LARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWMVQ-HGGDGWVVEE--- 140
P + + F R + RNL+ NPC +EG W + +GGD W VE+
Sbjct: 59 --EDWDQPVADWKI-----FYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSR 111
Query: 141 -NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGARHDSG 199
R P + FVTS+ C K QV+DL+ EG W EL+D+ R +I V DW+ AR D G
Sbjct: 112 DQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCG 171
Query: 200 CMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFVSFEHRGQD 259
Y+L VQLL + L F P I Q ++ V+H FSN GVR++ F+H G D
Sbjct: 172 SKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVD 231
Query: 260 TQFWAGHYGARVTNSSVIV 278
T +WAG YG RVTNSS+ +
Sbjct: 232 THYWAGWYGPRVTNSSITI 250
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 79.3 bits (194), Expect = 3e-15
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 107 RRPIGRNLIRNPCGQEGL-------------RKWMVQHGGDGWVVEENRTTVPGAPSQTC 153
RRP+ RNL+R+P EG+ R GW + +
Sbjct: 98 RRPLYRNLLRSP-NPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQ--------- 147
Query: 154 FVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDAN- 212
+ SW K+Q +DL EGLW ELLD + I V DW+ C+Y L V LL A+
Sbjct: 148 --QNQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADR 205
Query: 213 QTVLDKFSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVT 272
+TV+ + P + + V+HVF + GVRF+ F H+ ++ G RVT
Sbjct: 206 RTVIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVT 265
Query: 273 NSSVIVRVR 281
+SSV V++R
Sbjct: 266 DSSVSVQLR 274
>gi|34878749 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 66.2 bits (160), Expect = 3e-11
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 25 DLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLH 84
++++LP +LL + +HVP R LL CR VC WR L+D LW R+
Sbjct: 5 NINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREG--------F 56
Query: 85 LARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWMVQ-HGGDGWVVEE 140
+ P + + F R + RNL+ NPC +EG W + +GGD W VE+
Sbjct: 57 ITEDWDQPVADWK-----IFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVED 108
>gi|34878753 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 66.2 bits (160), Expect = 3e-11
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 25 DLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLH 84
++++LP +LL + +HVP R LL CR VC WR L+D LW R+
Sbjct: 5 NINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREG--------F 56
Query: 85 LARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWMVQ-HGGDGWVVEE 140
+ P + + F R + RNL+ NPC +EG W + +GGD W VE+
Sbjct: 57 ITEDWDQPVADWK-----IFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVED 108
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 42.0 bits (97), Expect = 6e-04
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 17 EPEPEEALDLS-QLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLL 69
E P EALD + +LP L L + S + PR+L RC QVC W+ L + LW+L
Sbjct: 79 EKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWML 131
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 11 ARVPAPEPEPEEALDLS---QLPPELLLVVLSHVP----PRTLLGRCRQVCRGWRALVDG 63
A PAP P PEE D ++P E+L+ + + P LGR +VCR W+
Sbjct: 94 APAPAPTPTPEEGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQ 153
Query: 64 QALW 67
ALW
Sbjct: 154 PALW 157
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 11 ARVPAPEPEPEEALDLS---QLPPELLLVVLSHVP----PRTLLGRCRQVCRGWRALVDG 63
A PAP P PEE D ++P E+L+ + + P LGR +VCR W+
Sbjct: 94 APAPAPTPTPEEGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQ 153
Query: 64 QALW 67
ALW
Sbjct: 154 PALW 157
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 19 EPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
EP+ D +S LP EL L VLS + P+ LL + Q CR WR L + LW
Sbjct: 155 EPQFQRDFISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 203
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 19 EPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
EP+ D +S LP EL L VLS + P+ LL + Q CR WR L + LW
Sbjct: 273 EPQFQRDFISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 321
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 19 EPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
EP+ D +S LP EL L VLS + P+ LL + Q CR WR L + LW
Sbjct: 193 EPQFQRDFISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 241
>gi|30795121 F-box and WD repeat domain containing 8 isoform 2
[Homo sapiens]
Length = 532
Score = 37.4 bits (85), Expect = 0.015
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 9 RAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
R AR P E D+ QLP EL + + ++ R LGRC QV + W+ + + + LW
Sbjct: 34 RRARRPENEMNDVPFFDI-QLPYELAINIFQYLD-RKELGRCAQVSKTWKVIAEDEVLW 90
>gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens]
Length = 458
Score = 37.0 bits (84), Expect = 0.020
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 4 SVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDG 63
S S RAA + EP L LPPELLL + S++ R +L +VC R LV
Sbjct: 61 SASEPRAASRVSAVSEP----GLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSD 116
Query: 64 QALWLL 69
W L
Sbjct: 117 HVTWRL 122
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 36.6 bits (83), Expect = 0.026
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 21 EEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
E + ++ LPPE++L + S++ P+ L RC QV W L +LW
Sbjct: 74 EHSTGITHLPPEVMLSIFSYLNPQELC-RCSQVSMKWSQLTKTGSLW 119
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 36.6 bits (83), Expect = 0.026
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 21 EEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
E + ++ LPPE++L + S++ P+ L RC QV W L +LW
Sbjct: 200 EHSTGITHLPPEVMLSIFSYLNPQELC-RCSQVSMKWSQLTKTGSLW 245
>gi|11545739 F-box and WD repeat domain containing 4 [Homo
sapiens]
Length = 412
Score = 36.6 bits (83), Expect = 0.026
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 2 GASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 61
G AAR A P AL +LP ELLL++ S++ R L GR QVCR R
Sbjct: 6 GEEEEEEEAARESAARPAAGPAL--WRLPEELLLLICSYLDMRAL-GRLAQVCRWLRRFT 62
Query: 62 DGQALW 67
LW
Sbjct: 63 SCDLLW 68
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo
sapiens]
Length = 326
Score = 36.6 bits (83), Expect = 0.026
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 26 LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHGATGRALLHL 85
L +LP +LL + S++P R + R +VC W+ LVD + LW + + + + HL
Sbjct: 4 LVELPDSVLLEIFSYLPVRDRI-RISRVCHRWKRLVDDRWLWRHVDLTLYTMRPKVMWHL 62
Query: 86 AR 87
R
Sbjct: 63 LR 64
>gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens]
Length = 307
Score = 36.2 bits (82), Expect = 0.033
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 4 SVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTL--LGRCRQVCRGWRALV 61
SVS+ R AR + E E A L++LP ++ L +LS + P L LG W V
Sbjct: 37 SVSKERVARTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHY---WNETV 93
Query: 62 DGQALWLLILARD 74
LW L RD
Sbjct: 94 RDPILWRYFLLRD 106
>gi|15834619 F-box only protein 4 isoform 1 [Homo sapiens]
Length = 387
Score = 36.2 bits (82), Expect = 0.033
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 4 SVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTL--LGRCRQVCRGWRALV 61
SVS+ R AR + E E A L++LP ++ L +LS + P L LG W V
Sbjct: 37 SVSKERVARTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHY---WNETV 93
Query: 62 DGQALWLLILARD 74
LW L RD
Sbjct: 94 RDPILWRYFLLRD 106
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 36.2 bits (82), Expect = 0.033
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 7 RGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQAL 66
RGR A +P E L + +++ RTLL +VCR WR + A+
Sbjct: 591 RGRRAERVSPSRSNEVISPEILKMRAALFCIFTYLDTRTLL-HAAEVCRDWRFVARHPAV 649
Query: 67 WLLILARDHGATGRALLHLARSCQS----PARNARPCPLGRFCARRPIGRNLIRNPCGQE 122
W +L + + L LA+ C +N +P G+ ++ R+ C +
Sbjct: 650 WTRVLLENARVCSKFLAMLAQWCTQAHSLTLQNLKPRQRGKKESKEEYARS--TRGCLEA 707
Query: 123 GLRKWMVQHGGD 134
GL + GG+
Sbjct: 708 GLESLLKAAGGN 719
>gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [Homo
sapiens]
Length = 598
Score = 34.7 bits (78), Expect = 0.097
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 28 QLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALW 67
QLP EL + + ++ R LGRC QV + W+ + + + LW
Sbjct: 118 QLPYELAINIFQYLD-RKELGRCAQVSKTWKVIAEDEVLW 156
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo
sapiens]
Length = 436
Score = 34.3 bits (77), Expect = 0.13
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 21 EEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL-VDG---QALWLLILARDHG 76
+EA+ +LP ELLL + S + TL RC QV R W L +DG Q + L RD
Sbjct: 20 DEAVINKKLPKELLLRIFSFLDVVTLC-RCAQVSRAWNVLALDGSNWQRIDLFDFQRD-- 76
Query: 77 ATGRALLHLARSC 89
GR + ++++ C
Sbjct: 77 IEGRVVENISKRC 89
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 33.9 bits (76), Expect = 0.17
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 15 APEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLI-LAR 73
A P+ E+A + +LP ++ + S +P L RC +VCR W L LW I L
Sbjct: 104 ASRPQKEQA-SIDRLPDHSMVQIFSFLPTNQLC-RCARVCRRWYNLAWDPRLWRTIRLTG 161
Query: 74 DHGATGRALLHLARS-CQ 90
+ RAL L R CQ
Sbjct: 162 ETINVDRALKVLTRRLCQ 179
>gi|157426875 F-box and leucine-rich repeat protein 18 [Homo
sapiens]
Length = 718
Score = 32.7 bits (73), Expect = 0.37
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 32 ELLLVVLSHVPPRTLLGRCRQVCRGWRAL-VDGQALWLLILARDHGAT 78
E+LL +LSHVP L+ R+ CR AL +D + ++L +D+ A+
Sbjct: 34 EILLHILSHVPSTDLILNVRRTCRKLAALCLDKSLIHTVLLQKDYQAS 81
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 32.7 bits (73), Expect = 0.37
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 24 LDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILAR 73
+ + PPEL+ ++S +P R L+ Q CR + + DG+ +W I R
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVA-LGQTCRYFHEVCDGEGVWRRICRR 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,798,303
Number of Sequences: 37866
Number of extensions: 647083
Number of successful extensions: 1839
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1782
Number of HSP's gapped (non-prelim): 61
length of query: 283
length of database: 18,247,518
effective HSP length: 101
effective length of query: 182
effective length of database: 14,423,052
effective search space: 2624995464
effective search space used: 2624995464
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.