Search of human proteins with 30425549

Search of human proteins with 30425549

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30425549 hypothetical protein LOC153571 [Homo sapiens]
         (138 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30425549 hypothetical protein LOC153571 [Homo sapiens]             284   2e-77
gi|164663805 methyltransferase like 7B [Homo sapiens]                  33   0.057
gi|21361103 solute carrier family 25, member 12 [Homo sapiens]         32   0.22 
gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens]     29   1.4  
gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens]     29   1.4  
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]            29   1.4  
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]             29   1.4  
gi|18201900 T-box 6 [Homo sapiens]                                     28   3.1  
gi|51479177 iroquois homeobox protein 1 [Homo sapiens]                 27   4.1  
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    27   4.1  
gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap...    27   4.1  
gi|13489095 sialoadhesin precursor [Homo sapiens]                      27   4.1  
gi|239750776 PREDICTED: similar to breast cancer anti-estrogen r...    27   5.4  
gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens]              27   5.4  
gi|14150171 THO complex 3 [Homo sapiens]                               27   5.4  
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    26   9.2  

>gi|30425549 hypothetical protein LOC153571 [Homo sapiens]
          Length = 138

 Score =  284 bits (726), Expect = 2e-77
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MVAPAARVFLRAVRAALTSTVPDLLCLLARGSPRGLASGRLPLAVHSAQHGPGSGAPWLR 60
           MVAPAARVFLRAVRAALTSTVPDLLCLLARGSPRGLASGRLPLAVHSAQHGPGSGAPWLR
Sbjct: 1   MVAPAARVFLRAVRAALTSTVPDLLCLLARGSPRGLASGRLPLAVHSAQHGPGSGAPWLR 60

Query: 61  IARRALRFVLSKHWGDDCYLTNRLWQDLKPPSHVENGQELRLAPPVQWALQVQGNQLQTA 120
           IARRALRFVLSKHWGDDCYLTNRLWQDLKPPSHVENGQELRLAPPVQWALQVQGNQLQTA
Sbjct: 61  IARRALRFVLSKHWGDDCYLTNRLWQDLKPPSHVENGQELRLAPPVQWALQVQGNQLQTA 120

Query: 121 VLCLRMAPPEPAGSRQRI 138
           VLCLRMAPPEPAGSRQRI
Sbjct: 121 VLCLRMAPPEPAGSRQRI 138


>gi|164663805 methyltransferase like 7B [Homo sapiens]
          Length = 244

 Score = 33.5 bits (75), Expect = 0.057
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 72  KHWGDDCYLTNRLWQDLKPPSHVENGQELRLAPPVQW 108
           KH GD C LT   W+DL+     E   E R  PP++W
Sbjct: 196 KHIGDGCCLTRETWKDLENAQFSEIQME-RQPPPLKW 231


>gi|21361103 solute carrier family 25, member 12 [Homo sapiens]
          Length = 678

 Score = 31.6 bits (70), Expect = 0.22
 Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 36  LASGRLP--LAVHSAQHGPGSGAP-WLRIARRALRFVL 70
           LA G LP  LA    Q  PG G P WL+IA  A RF L
Sbjct: 295 LAEGALPYNLAELQRQQSPGLGRPIWLQIAESAYRFTL 332


>gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
          Length = 205

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 41  LPLAVHSAQHGPGSGAPWLRIARRALRFVLSKH----WGDDCYLTNRLWQDLKPPSHVEN 96
           LP A   AQH P S +  L    RAL  ++       W D   ++  LW+D+K P   E 
Sbjct: 25  LPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGGLWSDQ--VSWPLWEDVKTPEPGEP 82

Query: 97  GQELRLAP 104
           G  L  +P
Sbjct: 83  GSPLPASP 90


>gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
          Length = 347

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 41  LPLAVHSAQHGPGSGAPWLRIARRALRFVLSKH----WGDDCYLTNRLWQDLKPPSHVEN 96
           LP A   AQH P S +  L    RAL  ++       W D   ++  LW+D+K P   E 
Sbjct: 167 LPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGGLWSDQ--VSWPLWEDVKTPEPGEP 224

Query: 97  GQELRLAP 104
           G  L  +P
Sbjct: 225 GSPLPASP 232


>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
          Length = 1516

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 90  PPSHVENGQELRLAPPVQWALQVQGNQLQTAVLCLRMAPPEPAG 133
           PP  V  G   +   P+Q A Q +G  L     C    PP P G
Sbjct: 560 PPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSHSLPPMPLG 603


>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
          Length = 1516

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 90  PPSHVENGQELRLAPPVQWALQVQGNQLQTAVLCLRMAPPEPAG 133
           PP  V  G   +   P+Q A Q +G  L     C    PP P G
Sbjct: 560 PPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSHSLPPMPLG 603


>gi|18201900 T-box 6 [Homo sapiens]
          Length = 436

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 30  RGSPRGLASGRLPLAVHSAQHGPGSGAPWLR 60
           R  P G A  RLP  V+     P +GA W+R
Sbjct: 157 RWEPSGKAEPRLPDRVYIHPDSPATGAHWMR 187


>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
          Length = 480

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 31/128 (24%), Positives = 46/128 (35%), Gaps = 22/128 (17%)

Query: 16  ALTSTVPDLLCLLARGSPRGLASGRLPLAVHSAQHGPGSGAPWLRIARRALRFVLSKH-- 73
           A T+T PD       G+P+       P A H   HGP +GAP    A      + + H  
Sbjct: 320 AETATSPD-------GAPKASPP---PPAGHPGAHGPSAGAPLQHPAFLPSHGLYTCHIG 369

Query: 74  ----WGDDCYLTN------RLWQDLKPPSHVENGQELRLAPPVQWALQVQGNQLQTAVLC 123
               W +  +L        R +  +  P    +G  L   PP Q  + +    L      
Sbjct: 370 KFSNWTNSAFLAQGSLLNMRSFLGVGAPHAAPHGPHLPAPPPPQPPVAIAPGALNGDKAS 429

Query: 124 LRMAPPEP 131
           +R +P  P
Sbjct: 430 VRSSPTLP 437


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 8/44 (18%)

Query: 1  MVAPAARVFLRAVRAALTSTVPDLLCLLARGSPRGLASGRLPLA 44
          M AP A + L AV A+         CL +   P G A GR PLA
Sbjct: 30 MPAPGALILLAAVSASG--------CLASPAHPDGFALGRAPLA 65


>gi|167614500 lymphocyte-activation protein 3 precursor [Homo
           sapiens]
          Length = 525

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)

Query: 33  PRGLASGRLPL--AVHSAQHG--PGSGAPWLRIARRA 65
           P GL SGRLPL   V   + G   G  + WLR ARRA
Sbjct: 106 PGGLRSGRLPLQPRVQLDERGRQRGDFSLWLRPARRA 142


>gi|13489095 sialoadhesin precursor [Homo sapiens]
          Length = 1709

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 4    PAARVFLRAVRAALTSTVPD--------LLCLLARGSPRGLA---SGRLPLAVHSAQHGP 52
            PAA   L A + A+ S+  D        + C +    P  LA    G++ LA  S  H  
Sbjct: 1337 PAALQVLYAPQDAVLSSFRDSRARSMAVIQCTVDSEPPAELALSHDGKV-LATSSGVHSL 1395

Query: 53   GSGAPWLRIARRALRF-VLSKHWGDDCYL 80
             SG   +++AR ALR  V     GDD Y+
Sbjct: 1396 ASGTGHVQVARNALRLQVQDVPAGDDTYV 1424


>gi|239750776 PREDICTED: similar to breast cancer anti-estrogen
           resistance 1 [Homo sapiens]
          Length = 224

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 9/63 (14%)

Query: 49  QHGPGSGAPWLRIARRALRFVLSKHWGDDCY-----LTNRLWQDLKPPSHVENGQELRLA 103
           Q  PG G P    A+   +   S   G D Y     +  R W+  KPP+ V      R A
Sbjct: 166 QVSPGPGGP----AQDIYQVPPSAGMGHDIYQVPSSMDTRSWEGTKPPAKVRLSWHSRAA 221

Query: 104 PPV 106
           P V
Sbjct: 222 PQV 224


>gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens]
          Length = 753

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 19/82 (23%)

Query: 46  HSAQHGPGSGAPWL-----RIARRALRFVLSKHWGD-DCYL---TNRLWQDLKPPSHVEN 96
           HSA++GPG+G  WL         +++    S+ WG+ DC        + +D + P   ++
Sbjct: 96  HSAKYGPGTGRIWLDNLSCSGTEQSVTECASRGWGNSDCTHDEDAGVICKDQRLPGFSDS 155

Query: 97  G----------QELRLAPPVQW 108
                      +E+R+ P V W
Sbjct: 156 NVIEVEHHLQVEEVRIRPAVGW 177


>gi|14150171 THO complex 3 [Homo sapiens]
          Length = 351

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 49 QHGPGSGAPWLRIARRALRFVL 70
          Q GPGS APW  ++    R+VL
Sbjct: 15 QSGPGSMAPWCSVSSGPSRYVL 36


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 26.2 bits (56), Expect = 9.2
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 19  STVPDLLCLLARGSPRGLASGRLPLAVHSAQHGPGSGAPWLRIARRAL 66
           ST P L  L A G P    +G+  +A      GPGS AP  R+  + +
Sbjct: 93  STPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTI 140


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,446,894
Number of Sequences: 37866
Number of extensions: 302624
Number of successful extensions: 724
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 715
Number of HSP's gapped (non-prelim): 16
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.