Guide to the Human Genome
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Name: PPP2R4 Sequence: fasta or formatted (281aa) NCBI GI: 30065649
Description:

protein phosphatase 2A, regulatory subunit B' isoform d

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [323aa] protein phosphatase 2A, regulatory subunit B' isoform b
alt prot [323aa] protein phosphatase 2A, regulatory subunit B' isoform b
alt prot [358aa] protein phosphatase 2A, regulatory subunit B' isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         21           3
 C cysteine            1.8          5           2
 D aspartate           3.9         11           2
 E glutamate           8.2         23           2
 F phenylalanine       6.0         17           1
 G glycine             6.0         17           1
 H histidine           3.2          9           1
 I isoleucine          6.0         17           2
 K lysine              6.8         19           2
 L leucine             7.8         22           2
 M methionine          2.5          7           1
 N asparagine          3.6         10           1
 P proline             6.4         18           3
 Q glutamine           3.9         11           1
 R arginine            3.6         10           1
 S serine              5.3         15           2
 T threonine           4.3         12           1
 V valine              7.8         22           2
 W tryptophan          1.8          5           1
 Y tyrosine            3.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 2A, regulatory subunit B' isofor... 
PPP2R4                0.964   protein phosphatase 2A, regulatory subunit B' isofor...
PPP2R4                0.964   protein phosphatase 2A, regulatory subunit B' isofor...
PPP2R4                0.742   protein phosphatase 2A, regulatory subunit B' isofor...
PSME3                 0.009   proteasome activator subunit 3 isoform 1 
PSME3                 0.009   proteasome activator subunit 3 isoform 2 
FAM13C                0.007   hypothetical protein LOC220965 isoform 2 
LPHN2                 0.007   latrophilin 2 precursor 
APAF1                 0.005   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.005   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.005   apoptotic peptidase activating factor 1 isoform b [Ho...
APAF1                 0.005   apoptotic peptidase activating factor 1 isoform a [Ho...
H2AFY2                0.005   H2A histone family, member Y2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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