BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] (116 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 249 3e-67 gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 249 3e-67 gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 249 3e-67 gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 112 6e-26 gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 64 2e-11 gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 64 2e-11 gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 64 2e-11 gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 57 3e-09 gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 52 1e-07 gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 45 9e-06 gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 45 9e-06 gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 42 1e-04 gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 40 4e-04 gi|4504033 glycosylphosphatidylinositol anchored molecule like p... 39 7e-04 gi|187829185 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|187829183 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|10835165 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|42716299 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|187829070 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|42761474 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|42716302 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|187828910 CD59 antigen preproprotein [Homo sapiens] 39 9e-04 gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] 39 0.001 gi|40255210 LY6/PLAUR domain containing 6B [Homo sapiens] 37 0.004 gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 36 0.006 gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 36 0.006 gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 36 0.006 gi|9966907 ARS component B precursor [Homo sapiens] 36 0.006 gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] 34 0.022 gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] 34 0.022 >gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] Length = 116 Score = 249 bits (636), Expect = 3e-67 Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116 >gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] Length = 116 Score = 249 bits (636), Expect = 3e-67 Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116 >gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] Length = 116 Score = 249 bits (636), Expect = 3e-67 Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116 >gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] Length = 131 Score = 112 bits (280), Expect = 6e-26 Identities = 51/51 (100%), Positives = 51/51 (100%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT 51 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT 51 >gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo sapiens] Length = 190 Score = 64.3 bits (155), Expect = 2e-11 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58 Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116 KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL Sbjct: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116 >gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo sapiens] Length = 190 Score = 64.3 bits (155), Expect = 2e-11 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58 Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116 KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL Sbjct: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116 >gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo sapiens] Length = 190 Score = 64.3 bits (155), Expect = 2e-11 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58 Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116 KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL Sbjct: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116 >gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] Length = 128 Score = 57.0 bits (136), Expect = 3e-09 Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 13/124 (10%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60 M L L+ + + A L CHVC + NC + + CPA +C TT T V Sbjct: 1 MRTALLLLAALAVATGPALTLRCHVCT-SSSNCKHSVVCPASSRFCKTTNTVEPLRGNLV 59 Query: 61 SKSCVPRCFE--TVYDGYSKHASTTSCCQYDLCN---------GTGLATPA-TLALAPIL 108 K C C T+ S S+T CCQ DLCN T LA A +L LA L Sbjct: 60 KKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSL 119 Query: 109 LATL 112 LA + Sbjct: 120 LAVI 123 >gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] Length = 123 Score = 52.0 bits (123), Expect = 1e-07 Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 7/120 (5%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCA--YNGDNCFNPMRCPAMVAYCMTTRTYYTPTRM 58 M +L +L+ + L AL C+ C + ++C C + C T R Sbjct: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60 Query: 59 KVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGL----ATPATLALAPILLATLWG 114 +SK C C + D Y + T CC DLCN +G A LAL P L LWG Sbjct: 61 VISKGCSLNCVDDSQDYYVGKKNIT-CCDTDLCNASGAHALQPAAAILALLPALGLLLWG 119 >gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] Length = 131 Score = 45.4 bits (106), Expect = 9e-06 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 15/129 (11%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDN--CFNPMRCPAMVAYCMTTRTYYTPTRM 58 M L ++L L+G+ A +L C C N C P C YC+T + Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60 Query: 59 -----KVSKSCVPRCFETVYDGYSKHASTT--SCCQYDLCNGT----GLATPATLALAPI 107 +SK+C P C + +G + ++ SCCQ LCN + GL TL A + Sbjct: 61 VTFGHSLSKTCSPAC--PIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGL 118 Query: 108 LLATLWGLL 116 LL+ L LL Sbjct: 119 LLSLLPALL 127 >gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] Length = 131 Score = 45.4 bits (106), Expect = 9e-06 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 15/129 (11%) Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDN--CFNPMRCPAMVAYCMTTRTYYTPTRM 58 M L ++L L+G+ A +L C C N C P C YC+T + Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60 Query: 59 -----KVSKSCVPRCFETVYDGYSKHASTT--SCCQYDLCNGT----GLATPATLALAPI 107 +SK+C P C + +G + ++ SCCQ LCN + GL TL A + Sbjct: 61 VTFGHSLSKTCSPAC--PIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGL 118 Query: 108 LLATLWGLL 116 LL+ L LL Sbjct: 119 LLSLLPALL 127 >gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] Length = 125 Score = 41.6 bits (96), Expect = 1e-04 Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 8/121 (6%) Query: 2 TPLLTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTR-----TYYT 54 T L L LV+ LA AL C+VC +C C C TT Y Sbjct: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63 Query: 55 PTRMKVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWG 114 V+KSC +C + DG + SCC +LCN G +L + L L Sbjct: 64 QGDSTVTKSCASKCKPSDVDGIGQ-TLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLS 122 Query: 115 L 115 L Sbjct: 123 L 123 >gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo sapiens] Length = 97 Score = 40.0 bits (92), Expect = 4e-04 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 5 LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61 L L V+ + L A+A+ CH C G C + RC +C+TT T T V+ Sbjct: 7 LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65 Query: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92 K C C + G + S +CCQ LCN Sbjct: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95 >gi|4504033 glycosylphosphatidylinositol anchored molecule like protein [Homo sapiens] Length = 158 Score = 39.3 bits (90), Expect = 7e-04 Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 22/114 (19%) Query: 4 LLTLILVVLMGLPLAQA-----------LDCHVCAYNGD-NCFNPMRCPAMVAYCMTTRT 51 +L L++ M LPL A L CH CA D NC N CP + CMT Sbjct: 1 MLLFALLLAMELPLVAASATMRAQWTYSLRCHDCAVINDFNCPNIRVCPYHIRRCMTISI 60 Query: 52 YYTPTRMKVSKSCVPRC-----FETVYDGYSKHASTTS-----CCQYDLCNGTG 95 + V K+C C E + K T S CC +CN G Sbjct: 61 RINSRELLVYKNCTNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCNAGG 114 >gi|187829185 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|187829183 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|10835165 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|42716299 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|187829070 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|42761474 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|42716302 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|187828910 CD59 antigen preproprotein [Homo sapiens] Length = 128 Score = 38.9 bits (89), Expect = 9e-04 Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63 L L+LV+ + +L C+ C +C + C + C+ T+ ++V Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63 Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112 C C F V ++ T CC+ DLCN GT L+ L L LA Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123 Query: 113 WGL 115 W L Sbjct: 124 WSL 126 >gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] Length = 171 Score = 38.5 bits (88), Expect = 0.001 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 16/90 (17%) Query: 16 PLAQALDCHVCAYNGDN--CFN---PMRCPAMVAYCMTTRTY-YTPTRMKVSKSCVPR-- 67 P C C DN C + CP YC T T T + V+K CVP Sbjct: 42 PYPGGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSISVTKRCVPLEE 101 Query: 68 -----CFETVYDGYSKHASTTSCCQYDLCN 92 C ++ ++G H TSCC+ ++CN Sbjct: 102 CLSTGCRDSEHEG---HKVCTSCCEGNICN 128 >gi|40255210 LY6/PLAUR domain containing 6B [Homo sapiens] Length = 207 Score = 36.6 bits (83), Expect = 0.004 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 14/89 (15%) Query: 16 PLAQALDCHVCAYNGDNCFNPMR------CPAMVAYCMTTRTYYTPTRM-KVSKSCVPRC 68 P + C C GDN +N R CP YC+T + + R ++K C R Sbjct: 79 PFPNSFKCFTCENAGDN-YNCNRWAEDKWCPQNTQYCLTVHHFTSHGRSTSITKKCASRS 137 Query: 69 FETVYDGY-----SKHASTTSCCQYDLCN 92 E + G S+H SCC+ +CN Sbjct: 138 -ECHFVGCHHSRDSEHTECRSCCEGMICN 165 >gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo sapiens] Length = 161 Score = 36.2 bits (82), Expect = 0.006 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59 L L+ V+L P A L C C N +C P +C C + R + K Sbjct: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89 Query: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109 V+K C C F G+ CC+ DLCNG A + ALA LL Sbjct: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149 Query: 110 ATL 112 +L Sbjct: 150 LSL 152 >gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo sapiens] Length = 140 Score = 36.2 bits (82), Expect = 0.006 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59 L L+ V+L P A L C C N +C P +C C + R + K Sbjct: 11 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 68 Query: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109 V+K C C F G+ CC+ DLCNG A + ALA LL Sbjct: 69 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 128 Query: 110 ATL 112 +L Sbjct: 129 LSL 131 >gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo sapiens] Length = 161 Score = 36.2 bits (82), Expect = 0.006 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%) Query: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59 L L+ V+L P A L C C N +C P +C C + R + K Sbjct: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89 Query: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109 V+K C C F G+ CC+ DLCNG A + ALA LL Sbjct: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149 Query: 110 ATL 112 +L Sbjct: 150 LSL 152 >gi|9966907 ARS component B precursor [Homo sapiens] Length = 103 Score = 36.2 bits (82), Expect = 0.006 Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 8/93 (8%) Query: 7 LILVVLMGLPLAQALDCHVC--AYNGDNCFNPMRCPAMVAYCMTT-----RTYYTPTRMK 59 L+LV + +AL C+ C +C RC CMTT Y Sbjct: 9 LLLVAAWSMGCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPV 68 Query: 60 VSKSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92 V++SC C T D A CC DLCN Sbjct: 69 VTRSCSSSCVATDPDSIGA-AHLIFCCFRDLCN 100 >gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] Length = 204 Score = 34.3 bits (77), Expect = 0.022 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%) Query: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57 T LL +L+ + L L L C +C G C M+ C + C+ T Sbjct: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67 Query: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101 + K C+ C+ V G H T+S CCQ D CN L+ P T Sbjct: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117 >gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] Length = 204 Score = 34.3 bits (77), Expect = 0.022 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%) Query: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57 T LL +L+ + L L L C +C G C M+ C + C+ T Sbjct: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67 Query: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101 + K C+ C+ V G H T+S CCQ D CN L+ P T Sbjct: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.327 0.137 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,589,673 Number of Sequences: 37866 Number of extensions: 181326 Number of successful extensions: 556 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 496 Number of HSP's gapped (non-prelim): 89 length of query: 116 length of database: 18,247,518 effective HSP length: 86 effective length of query: 30 effective length of database: 14,991,042 effective search space: 449731260 effective search space used: 449731260 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.