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Search of human proteins with 29294641
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo
sapiens]
(116 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 249 3e-67
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 249 3e-67
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 249 3e-67
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 112 6e-26
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 64 2e-11
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 64 2e-11
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 64 2e-11
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 57 3e-09
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 52 1e-07
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 45 9e-06
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 45 9e-06
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 42 1e-04
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 40 4e-04
gi|4504033 glycosylphosphatidylinositol anchored molecule like p... 39 7e-04
gi|187829185 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|187829183 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|10835165 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|42716299 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|187829070 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|42761474 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|42716302 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|187828910 CD59 antigen preproprotein [Homo sapiens] 39 9e-04
gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] 39 0.001
gi|40255210 LY6/PLAUR domain containing 6B [Homo sapiens] 37 0.004
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 36 0.006
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 36 0.006
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 36 0.006
gi|9966907 ARS component B precursor [Homo sapiens] 36 0.006
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] 34 0.022
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] 34 0.022
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 249 bits (636), Expect = 3e-67
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116
SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL
Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 249 bits (636), Expect = 3e-67
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116
SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL
Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 249 bits (636), Expect = 3e-67
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116
SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL
Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWGLL 116
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo
sapiens]
Length = 131
Score = 112 bits (280), Expect = 6e-26
Identities = 51/51 (100%), Positives = 51/51 (100%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT 51
MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT 51
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 64.3 bits (155), Expect = 2e-11
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58
Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116
KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL
Sbjct: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 64.3 bits (155), Expect = 2e-11
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58
Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116
KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL
Sbjct: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 64.3 bits (155), Expect = 2e-11
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58
Query: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116
KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL
Sbjct: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 57.0 bits (136), Expect = 3e-09
Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
M L L+ + + A L CHVC + NC + + CPA +C TT T V
Sbjct: 1 MRTALLLLAALAVATGPALTLRCHVCT-SSSNCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
Query: 61 SKSCVPRCFE--TVYDGYSKHASTTSCCQYDLCN---------GTGLATPA-TLALAPIL 108
K C C T+ S S+T CCQ DLCN T LA A +L LA L
Sbjct: 60 KKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSL 119
Query: 109 LATL 112
LA +
Sbjct: 120 LAVI 123
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 52.0 bits (123), Expect = 1e-07
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCA--YNGDNCFNPMRCPAMVAYCMTTRTYYTPTRM 58
M +L +L+ + L AL C+ C + ++C C + C T R
Sbjct: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
Query: 59 KVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGL----ATPATLALAPILLATLWG 114
+SK C C + D Y + T CC DLCN +G A LAL P L LWG
Sbjct: 61 VISKGCSLNCVDDSQDYYVGKKNIT-CCDTDLCNASGAHALQPAAAILALLPALGLLLWG 119
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 45.4 bits (106), Expect = 9e-06
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDN--CFNPMRCPAMVAYCMTTRTYYTPTRM 58
M L ++L L+G+ A +L C C N C P C YC+T +
Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60
Query: 59 -----KVSKSCVPRCFETVYDGYSKHASTT--SCCQYDLCNGT----GLATPATLALAPI 107
+SK+C P C + +G + ++ SCCQ LCN + GL TL A +
Sbjct: 61 VTFGHSLSKTCSPAC--PIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGL 118
Query: 108 LLATLWGLL 116
LL+ L LL
Sbjct: 119 LLSLLPALL 127
>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 45.4 bits (106), Expect = 9e-06
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDN--CFNPMRCPAMVAYCMTTRTYYTPTRM 58
M L ++L L+G+ A +L C C N C P C YC+T +
Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60
Query: 59 -----KVSKSCVPRCFETVYDGYSKHASTT--SCCQYDLCNGT----GLATPATLALAPI 107
+SK+C P C + +G + ++ SCCQ LCN + GL TL A +
Sbjct: 61 VTFGHSLSKTCSPAC--PIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGL 118
Query: 108 LLATLWGLL 116
LL+ L LL
Sbjct: 119 LLSLLPALL 127
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 41.6 bits (96), Expect = 1e-04
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 2 TPLLTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTR-----TYYT 54
T L L LV+ LA AL C+VC +C C C TT Y
Sbjct: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
Query: 55 PTRMKVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWG 114
V+KSC +C + DG + SCC +LCN G +L + L L
Sbjct: 64 QGDSTVTKSCASKCKPSDVDGIGQ-TLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLS 122
Query: 115 L 115
L
Sbjct: 123 L 123
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 40.0 bits (92), Expect = 4e-04
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 5 LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61
L L V+ + L A+A+ CH C G C + RC +C+TT T T V+
Sbjct: 7 LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
Query: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92
K C C + G + S +CCQ LCN
Sbjct: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
>gi|4504033 glycosylphosphatidylinositol anchored molecule like
protein [Homo sapiens]
Length = 158
Score = 39.3 bits (90), Expect = 7e-04
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 22/114 (19%)
Query: 4 LLTLILVVLMGLPLAQA-----------LDCHVCAYNGD-NCFNPMRCPAMVAYCMTTRT 51
+L L++ M LPL A L CH CA D NC N CP + CMT
Sbjct: 1 MLLFALLLAMELPLVAASATMRAQWTYSLRCHDCAVINDFNCPNIRVCPYHIRRCMTISI 60
Query: 52 YYTPTRMKVSKSCVPRC-----FETVYDGYSKHASTTS-----CCQYDLCNGTG 95
+ V K+C C E + K T S CC +CN G
Sbjct: 61 RINSRELLVYKNCTNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCNAGG 114
>gi|187829185 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|187829183 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|10835165 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|42716299 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|187829070 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|42761474 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|42716302 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|187828910 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 4 LLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKVSKS 63
L L+LV+ + +L C+ C +C + C + C+ T+ ++V
Sbjct: 9 LFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNK 63
Query: 64 C--VPRC-FETVYDGYSKHASTTSCCQYDLCN--------GTGLATPATLALAPILLATL 112
C C F V ++ T CC+ DLCN GT L+ L L LA
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAA 123
Query: 113 WGL 115
W L
Sbjct: 124 WSL 126
>gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]
Length = 171
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 16 PLAQALDCHVCAYNGDN--CFN---PMRCPAMVAYCMTTRTY-YTPTRMKVSKSCVPR-- 67
P C C DN C + CP YC T T T + V+K CVP
Sbjct: 42 PYPGGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSISVTKRCVPLEE 101
Query: 68 -----CFETVYDGYSKHASTTSCCQYDLCN 92
C ++ ++G H TSCC+ ++CN
Sbjct: 102 CLSTGCRDSEHEG---HKVCTSCCEGNICN 128
>gi|40255210 LY6/PLAUR domain containing 6B [Homo sapiens]
Length = 207
Score = 36.6 bits (83), Expect = 0.004
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 16 PLAQALDCHVCAYNGDNCFNPMR------CPAMVAYCMTTRTYYTPTRM-KVSKSCVPRC 68
P + C C GDN +N R CP YC+T + + R ++K C R
Sbjct: 79 PFPNSFKCFTCENAGDN-YNCNRWAEDKWCPQNTQYCLTVHHFTSHGRSTSITKKCASRS 137
Query: 69 FETVYDGY-----SKHASTTSCCQYDLCN 92
E + G S+H SCC+ +CN
Sbjct: 138 -ECHFVGCHHSRDSEHTECRSCCEGMICN 165
>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 36.2 bits (82), Expect = 0.006
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%)
Query: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59
L L+ V+L P A L C C N +C P +C C + R + K
Sbjct: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89
Query: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109
V+K C C F G+ CC+ DLCNG A + ALA LL
Sbjct: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149
Query: 110 ATL 112
+L
Sbjct: 150 LSL 152
>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
sapiens]
Length = 140
Score = 36.2 bits (82), Expect = 0.006
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%)
Query: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59
L L+ V+L P A L C C N +C P +C C + R + K
Sbjct: 11 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 68
Query: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109
V+K C C F G+ CC+ DLCNG A + ALA LL
Sbjct: 69 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 128
Query: 110 ATL 112
+L
Sbjct: 129 LSL 131
>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 36.2 bits (82), Expect = 0.006
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 17/123 (13%)
Query: 5 LTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTRTYYTPTRMK--- 59
L L+ V+L P A L C C N +C P +C C + R + K
Sbjct: 32 LALLAVLLCSAP-AHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASVRITDPSSSRKDHS 89
Query: 60 VSKSCVPRC-------FETVYDGYSKHAST---TSCCQYDLCNGTGLATPATLALAPILL 109
V+K C C F G+ CC+ DLCNG A + ALA LL
Sbjct: 90 VNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLL 149
Query: 110 ATL 112
+L
Sbjct: 150 LSL 152
>gi|9966907 ARS component B precursor [Homo sapiens]
Length = 103
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 7 LILVVLMGLPLAQALDCHVC--AYNGDNCFNPMRCPAMVAYCMTT-----RTYYTPTRMK 59
L+LV + +AL C+ C +C RC CMTT Y
Sbjct: 9 LLLVAAWSMGCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPV 68
Query: 60 VSKSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92
V++SC C T D A CC DLCN
Sbjct: 69 VTRSCSSSCVATDPDSIGA-AHLIFCCFRDLCN 100
>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 34.3 bits (77), Expect = 0.022
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57
T LL +L+ + L L L C +C G C M+ C + C+ T
Sbjct: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
Query: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101
+ K C+ C+ V G H T+S CCQ D CN L+ P T
Sbjct: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 34.3 bits (77), Expect = 0.022
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57
T LL +L+ + L L L C +C G C M+ C + C+ T
Sbjct: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
Query: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101
+ K C+ C+ V G H T+S CCQ D CN L+ P T
Sbjct: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.137 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,589,673
Number of Sequences: 37866
Number of extensions: 181326
Number of successful extensions: 556
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 89
length of query: 116
length of database: 18,247,518
effective HSP length: 86
effective length of query: 30
effective length of database: 14,991,042
effective search space: 449731260
effective search space used: 449731260
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.