Guide to the Human Genome
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Search of human proteins with 29029537

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|29029537 phosphatidylinositol glycan anchor biosynthesis,
class N [Homo sapiens]
         (931 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912500 phosphatidylinositol glycan anchor biosynthesis, clas...  1866   0.0  
gi|29029537 phosphatidylinositol glycan anchor biosynthesis, cla...  1866   0.0  
gi|187608446 phosphatidylinositol glycan anchor biosynthesis, cl...    63   1e-09
gi|187608438 phosphatidylinositol glycan anchor biosynthesis, cl...    63   1e-09
gi|38045917 phosphatidylinositol glycan anchor biosynthesis, cla...    50   1e-05
gi|23397648 phosphatidylinositol glycan anchor biosynthesis, cla...    50   1e-05
gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4 (p...    44   7e-04
gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6 [...    42   0.003
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ...    34   0.55 
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ...    34   0.55 
gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapi...    33   1.2  
gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapi...    33   1.2  
gi|171184408 solute carrier family 6 (neurotransmitter transport...    32   3.6  
gi|171184406 solute carrier family 6 (neurotransmitter transport...    32   3.6  
gi|171184404 solute carrier family 6 (neurotransmitter transport...    32   3.6  
gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7 [...    32   3.6  
gi|207450721 ganglioside induced differentiation associated prot...    30   8.0  
gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Ho...    30   8.0  

>gi|6912500 phosphatidylinositol glycan anchor biosynthesis, class N
           [Homo sapiens]
          Length = 931

 Score = 1866 bits (4834), Expect = 0.0
 Identities = 931/931 (100%), Positives = 931/931 (100%)

Query: 1   MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALY 60
           MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALY
Sbjct: 1   MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALY 60

Query: 61  ELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENP 120
           ELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENP
Sbjct: 61  ELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENP 120

Query: 121 VEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFD 180
           VEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFD
Sbjct: 121 VEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFD 180

Query: 181 NVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKE 240
           NVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKE
Sbjct: 181 NVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKE 240

Query: 241 IVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQ 300
           IVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQ
Sbjct: 241 IVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQ 300

Query: 301 FDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESM 360
           FDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESM
Sbjct: 301 FDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESM 360

Query: 361 FTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSL 420
           FTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSL
Sbjct: 361 FTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSL 420

Query: 421 CKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVSKEVKKP 480
           CKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVSKEVKKP
Sbjct: 421 CKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVSKEVKKP 480

Query: 481 SHLLPCSFVAIGILVAFFLLIQACPWTYYVYGLLPLPIWYAVLREFQVIQDLVVSVLTYP 540
           SHLLPCSFVAIGILVAFFLLIQACPWTYYVYGLLPLPIWYAVLREFQVIQDLVVSVLTYP
Sbjct: 481 SHLLPCSFVAIGILVAFFLLIQACPWTYYVYGLLPLPIWYAVLREFQVIQDLVVSVLTYP 540

Query: 541 LSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMTSLSWTFFSL 600
           LSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMTSLSWTFFSL
Sbjct: 541 LSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMTSLSWTFFSL 600

Query: 601 LLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLST 660
           LLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLST
Sbjct: 601 LLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLST 660

Query: 661 VLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLMST 720
           VLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLMST
Sbjct: 661 VLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLMST 720

Query: 721 YLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSGVCCKQKLTSIQFSYNTDITQFRQLY 780
           YLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSGVCCKQKLTSIQFSYNTDITQFRQLY
Sbjct: 721 YLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSGVCCKQKLTSIQFSYNTDITQFRQLY 780

Query: 781 LDDIRRAFFLVFFLVTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFV 840
           LDDIRRAFFLVFFLVTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFV
Sbjct: 781 LDDIRRAFFLVFFLVTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFV 840

Query: 841 LVMCAFEAVQLTTQLSSKSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMS 900
           LVMCAFEAVQLTTQLSSKSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMS
Sbjct: 841 LVMCAFEAVQLTTQLSSKSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMS 900

Query: 901 MTIFLVFLNGLAQLLTTKKLRLCGKPKSHFM 931
           MTIFLVFLNGLAQLLTTKKLRLCGKPKSHFM
Sbjct: 901 MTIFLVFLNGLAQLLTTKKLRLCGKPKSHFM 931


>gi|29029537 phosphatidylinositol glycan anchor biosynthesis, class
           N [Homo sapiens]
          Length = 931

 Score = 1866 bits (4834), Expect = 0.0
 Identities = 931/931 (100%), Positives = 931/931 (100%)

Query: 1   MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALY 60
           MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALY
Sbjct: 1   MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALY 60

Query: 61  ELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENP 120
           ELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENP
Sbjct: 61  ELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENP 120

Query: 121 VEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFD 180
           VEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFD
Sbjct: 121 VEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFD 180

Query: 181 NVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKE 240
           NVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKE
Sbjct: 181 NVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKE 240

Query: 241 IVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQ 300
           IVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQ
Sbjct: 241 IVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQ 300

Query: 301 FDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESM 360
           FDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESM
Sbjct: 301 FDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESM 360

Query: 361 FTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSL 420
           FTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSL
Sbjct: 361 FTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSL 420

Query: 421 CKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVSKEVKKP 480
           CKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVSKEVKKP
Sbjct: 421 CKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVSKEVKKP 480

Query: 481 SHLLPCSFVAIGILVAFFLLIQACPWTYYVYGLLPLPIWYAVLREFQVIQDLVVSVLTYP 540
           SHLLPCSFVAIGILVAFFLLIQACPWTYYVYGLLPLPIWYAVLREFQVIQDLVVSVLTYP
Sbjct: 481 SHLLPCSFVAIGILVAFFLLIQACPWTYYVYGLLPLPIWYAVLREFQVIQDLVVSVLTYP 540

Query: 541 LSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMTSLSWTFFSL 600
           LSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMTSLSWTFFSL
Sbjct: 541 LSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMTSLSWTFFSL 600

Query: 601 LLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLST 660
           LLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLST
Sbjct: 601 LLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLST 660

Query: 661 VLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLMST 720
           VLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLMST
Sbjct: 661 VLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLMST 720

Query: 721 YLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSGVCCKQKLTSIQFSYNTDITQFRQLY 780
           YLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSGVCCKQKLTSIQFSYNTDITQFRQLY
Sbjct: 721 YLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSGVCCKQKLTSIQFSYNTDITQFRQLY 780

Query: 781 LDDIRRAFFLVFFLVTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFV 840
           LDDIRRAFFLVFFLVTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFV
Sbjct: 781 LDDIRRAFFLVFFLVTAFFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFV 840

Query: 841 LVMCAFEAVQLTTQLSSKSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMS 900
           LVMCAFEAVQLTTQLSSKSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMS
Sbjct: 841 LVMCAFEAVQLTTQLSSKSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMS 900

Query: 901 MTIFLVFLNGLAQLLTTKKLRLCGKPKSHFM 931
           MTIFLVFLNGLAQLLTTKKLRLCGKPKSHFM
Sbjct: 901 MTIFLVFLNGLAQLLTTKKLRLCGKPKSHFM 931


>gi|187608446 phosphatidylinositol glycan anchor biosynthesis, class
           G isoform 1 [Homo sapiens]
          Length = 983

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 73/321 (22%), Positives = 128/321 (39%), Gaps = 45/321 (14%)

Query: 31  GMTPQFTPLPPPA-RRLVLFVADGLRADALYELDENGNSRAPFIRNIIMHEGSWG-ISHT 88
           G +  +T LPPP   ++V+ + D LR D ++     G    P+   ++    S   ++  
Sbjct: 52  GASSNWTTLPPPLFSKVVIVLIDALRDDFVF--GSKGVKFMPYTTYLVEKGASHSFVAEA 109

Query: 89  RVPTESRPGHVALIAGFYEDVSAVAKGWKENPVEFDSLFNESKYTWS----WGSPDILPM 144
           + PT + P   AL+ G       V +      +  DS+  ++K        +G    + +
Sbjct: 110 KPPTVTMPRIKALMTGSLPGFVDVIRNLNSPALLEDSVIRQAKAAGKRIVFYGDETWVKL 169

Query: 145 FAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFDNVKDFFHHARNNQSLFSKINEEKI 204
           F K       +   YD     F   D T++D  V           R+   +  + + +  
Sbjct: 170 FPK-------HFVEYDGTTSFF-VSDYTEVDNNV----------TRHLDKVLKRGDWD-- 209

Query: 205 VFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKEI-VSMFNHFYGNDGKTTFIFTSDH 263
           +  LH LG+D  GH   P+S      + ++D  + +I  S+ +           +   DH
Sbjct: 210 ILILHYLGLDHIGHISGPNSPLIGQKLSEMDSVLMKIHTSLQSKERETPLPNLLVLCGDH 269

Query: 264 GMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKEWRLENWKRLDVNQAD 323
           GM++ GSHGA    E  TPL+   +  +               K   + + K   V Q D
Sbjct: 270 GMSETGSHGASSTEEVNTPLILISSAFE--------------RKPGDIRHPKH--VQQTD 313

Query: 324 IAPLMTSLIGVPFPLNSVGIL 344
           +A  +   +G+P P +SVG L
Sbjct: 314 VAATLAIALGLPIPKDSVGSL 334


>gi|187608438 phosphatidylinositol glycan anchor biosynthesis, class
           G isoform 2 [Homo sapiens]
          Length = 975

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 73/321 (22%), Positives = 128/321 (39%), Gaps = 45/321 (14%)

Query: 31  GMTPQFTPLPPPA-RRLVLFVADGLRADALYELDENGNSRAPFIRNIIMHEGSWG-ISHT 88
           G +  +T LPPP   ++V+ + D LR D ++     G    P+   ++    S   ++  
Sbjct: 52  GASSNWTTLPPPLFSKVVIVLIDALRDDFVF--GSKGVKFMPYTTYLVEKGASHSFVAEA 109

Query: 89  RVPTESRPGHVALIAGFYEDVSAVAKGWKENPVEFDSLFNESKYTWS----WGSPDILPM 144
           + PT + P   AL+ G       V +      +  DS+  ++K        +G    + +
Sbjct: 110 KPPTVTMPRIKALMTGSLPGFVDVIRNLNSPALLEDSVIRQAKAAGKRIVFYGDETWVKL 169

Query: 145 FAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFDNVKDFFHHARNNQSLFSKINEEKI 204
           F K       +   YD     F   D T++D  V           R+   +  + + +  
Sbjct: 170 FPK-------HFVEYDGTTSFF-VSDYTEVDNNV----------TRHLDKVLKRGDWD-- 209

Query: 205 VFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKEI-VSMFNHFYGNDGKTTFIFTSDH 263
           +  LH LG+D  GH   P+S      + ++D  + +I  S+ +           +   DH
Sbjct: 210 ILILHYLGLDHIGHISGPNSPLIGQKLSEMDSVLMKIHTSLQSKERETPLPNLLVLCGDH 269

Query: 264 GMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKEWRLENWKRLDVNQAD 323
           GM++ GSHGA    E  TPL+   +  +               K   + + K   V Q D
Sbjct: 270 GMSETGSHGASSTEEVNTPLILISSAFE--------------RKPGDIRHPKH--VQQTD 313

Query: 324 IAPLMTSLIGVPFPLNSVGIL 344
           +A  +   +G+P P +SVG L
Sbjct: 314 VAATLAIALGLPIPKDSVGSL 334


>gi|38045917 phosphatidylinositol glycan anchor biosynthesis, class
           O isoform 2 [Homo sapiens]
          Length = 672

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 30/171 (17%)

Query: 205 VFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYGNDGKTTFIFTSDHG 264
           V   H LG+D  GH H P   +    + ++D  ++ +V         +  T  +   DHG
Sbjct: 226 VLIAHFLGVDHCGHKHGPHHPEMAKKLSQMDQVIQGLVERL------ENDTLLVVAGDHG 279

Query: 265 MTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKEWRLENWKRLDVNQADI 324
           MT  G HG     E    L  +     +P     +                   + Q  +
Sbjct: 280 MTTNGDHGGDSELEVSAALFLYSPTAVFPSTPPEEP----------------EVIPQVSL 323

Query: 325 APLMTSLIGVPFPLNSVGILPVDYL--------NNTDLFKAESMFTNAVQI 367
            P +  L+G+P P  ++G +  +          +++ L +A ++  NA Q+
Sbjct: 324 VPTLALLLGLPIPFGNIGEVMAELFSGGEDSQPHSSALAQASALHLNAQQV 374


>gi|23397648 phosphatidylinositol glycan anchor biosynthesis, class
           O isoform 1 [Homo sapiens]
          Length = 1089

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 30/171 (17%)

Query: 205 VFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYGNDGKTTFIFTSDHG 264
           V   H LG+D  GH H P   +    + ++D  ++ +V         +  T  +   DHG
Sbjct: 226 VLIAHFLGVDHCGHKHGPHHPEMAKKLSQMDQVIQGLVERL------ENDTLLVVAGDHG 279

Query: 265 MTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKEWRLENWKRLDVNQADI 324
           MT  G HG     E    L  +     +P     +                   + Q  +
Sbjct: 280 MTTNGDHGGDSELEVSAALFLYSPTAVFPSTPPEEP----------------EVIPQVSL 323

Query: 325 APLMTSLIGVPFPLNSVGILPVDYL--------NNTDLFKAESMFTNAVQI 367
            P +  L+G+P P  ++G +  +          +++ L +A ++  NA Q+
Sbjct: 324 VPTLALLLGLPIPFGNIGEVMAELFSGGEDSQPHSSALAQASALHLNAQQV 374


>gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4
           (putative function) [Homo sapiens]
          Length = 453

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 23/252 (9%)

Query: 22  IYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALYELDENGNSRAPFIRNIIMHEG 81
           I   S L+ G     +   PP   LV F  DG RAD L       N   P ++N I  EG
Sbjct: 6   ILLFSGLITGFRSDSSSSLPPKLLLVSF--DGFRADYLK------NYEFPHLQNFIK-EG 56

Query: 82  SWGISHTR--VPTESRPGHVALIAGFYEDVSAVAKGWKENPV---EFDSLFNESKYTWSW 136
              + H +    T++ P H +++ G YE+   +      + V    F    ++  + W+ 
Sbjct: 57  VL-VEHVKNVFITKTFPNHYSIVTGLYEESHGIVANSMYDAVTKKHFSDSNDKDPFWWN- 114

Query: 137 GSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFDNVKDFFHHARNNQSLF 196
              + +P++      ++  + +      D    D T    ++  N    F    NN +++
Sbjct: 115 ---EAVPIWVTNQLQENRSSAAAMWPGTDVPIHD-TISSYFMNYNSSVSFEERLNNITMW 170

Query: 197 SKINEEKIVF-FLHLLGIDTNGHAHRPSSRDYKHNI-KKVDDGVKEIVSMFNHFYGNDGK 254
              +   + F  L+    D +GH + P  ++    + KK+DD + ++V       G    
Sbjct: 171 LNNSNPPVTFATLYWEEPDASGHKYGPEDKENMSRVLKKIDDLIGDLVQRLK-MLGLWEN 229

Query: 255 TTFIFTSDHGMT 266
              I TSDHGMT
Sbjct: 230 LNVIITSDHGMT 241


>gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6
           [Homo sapiens]
          Length = 440

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 14/230 (6%)

Query: 44  RRLVLFVADGLRADALYELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIA 103
           R+L++F+ DG R+D  Y  DE   S  P  + I+             P+ S P +  L+ 
Sbjct: 24  RKLLVFLLDGFRSD--YISDEALES-LPGFKEIVSRGVKVDYLTPDFPSLSYPNYYTLMT 80

Query: 104 GFYEDVSAVAKGWKENPV---EFDSLFNESKYTWSW--GSPDILPMFAKGASGDHVYTYS 158
           G + +V  +   +  +P     FD   N+      W  GS  +     K     ++Y Y 
Sbjct: 81  GRHCEVHQMIGNYMWDPTTNKSFDIGVNKDSLMPLWWNGSEPLWVTLTKAKRKVYMY-YW 139

Query: 159 YDAKREDFGAQDATKLDTWVFDNVKDFFHHARN-NQSLFSKINEEKIVFFLHLLGIDTNG 217
              + E  G +    L+   + NV    + A   + +L S  +    +  ++   ID  G
Sbjct: 140 PGCEVEILGVRPTYCLE---YKNVPTDINFANAVSDALDSFKSGRADLAAIYHERIDVEG 196

Query: 218 HAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYGNDGKTTFIFTSDHGMTD 267
           H + P+S   K  +K VD  +K +        G   +   I  SDHGMTD
Sbjct: 197 HHYGPASPQRKDALKAVDTVLKYMTKWIQE-RGLQDRLNVIIFSDHGMTD 245


>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
           sapiens]
          Length = 391

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 8/211 (3%)

Query: 532 LVVSVLTYPLSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMT 591
           +VV+ L   ++  V  +    + I  LV+      M+   LT       +        +T
Sbjct: 113 VVVTSLVMVITPLVAVITPLGVVITSLVVVITSLVMVITSLTVVITSSIVVITPLVMVIT 172

Query: 592 SLSWTFFSLLLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELL 651
           SL+    SL + + PL+ V+       +V+   L+V+L++L V         +     L 
Sbjct: 173 SLTVIITSLFVVITPLVMVI----TFLIVVNTSLVVVLITLIVSPPPSLWLSAPCITSLF 228

Query: 652 VHLLQVLSTVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLF 711
           V ++ ++  + S+ VV ++   +L    + ++    S   + SSLVV + S  V+F  L 
Sbjct: 229 VVIIPLVVVITSLIVVITSLVVVL----IAVIVVTPSLIVVISSLVVVIASLVVVFISLI 284

Query: 712 SILLSLMSTYLLLSTGYEALFPLVLSCLMFV 742
            ++ SL+     L     +L  ++ S ++ +
Sbjct: 285 VVISSLIVVITSLVVVITSLVVVITSLIVVI 315



 Score = 33.5 bits (75), Expect = 0.95
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 12/128 (9%)

Query: 599 SLLLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVL 658
           SL + + PL+ V+       +V+   L+V+L+++ VVT  +      +   L+V +  ++
Sbjct: 226 SLFVVIIPLVVVITSL----IVVITSLVVVLIAVIVVTPSL----IVVISSLVVVIASLV 277

Query: 659 STVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLM 718
              +S+ VV S+   ++      L+  I S   + +SL+V + S  V+   L  ++ SL+
Sbjct: 278 VVFISLIVVISSLIVVITS----LVVVITSLVVVITSLIVVITSLVVVITSLVVVITSLI 333

Query: 719 STYLLLST 726
              + LST
Sbjct: 334 VVIIPLST 341


>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
           sapiens]
          Length = 398

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 8/211 (3%)

Query: 532 LVVSVLTYPLSHFVGYLLAFTLGIEVLVLSFFYRYMLTAGLTAFAAWPFLTRLWTRAKMT 591
           +VV+ L   ++  V  +    + I  LV+      M+   LT       +        +T
Sbjct: 120 VVVTSLVMVITPLVAVITPLGVVITSLVVVITSLVMVITSLTVVITSSIVVITPLVMVIT 179

Query: 592 SLSWTFFSLLLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELL 651
           SL+    SL + + PL+ V+       +V+   L+V+L++L V         +     L 
Sbjct: 180 SLTVIITSLFVVITPLVMVI----TFLIVVNTSLVVVLITLIVSPPPSLWLSAPCITSLF 235

Query: 652 VHLLQVLSTVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLF 711
           V ++ ++  + S+ VV ++   +L    + ++    S   + SSLVV + S  V+F  L 
Sbjct: 236 VVIIPLVVVITSLIVVITSLVVVL----IAVIVVTPSLIVVISSLVVVIASLVVVFISLI 291

Query: 712 SILLSLMSTYLLLSTGYEALFPLVLSCLMFV 742
            ++ SL+     L     +L  ++ S ++ +
Sbjct: 292 VVISSLIVVITSLVVVITSLVVVITSLIVVI 322



 Score = 33.5 bits (75), Expect = 0.95
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 12/128 (9%)

Query: 599 SLLLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCVVTSLMKRKDSFIKEELLVHLLQVL 658
           SL + + PL+ V+       +V+   L+V+L+++ VVT  +      +   L+V +  ++
Sbjct: 233 SLFVVIIPLVVVITSL----IVVITSLVVVLIAVIVVTPSL----IVVISSLVVVIASLV 284

Query: 659 STVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSLM 718
              +S+ VV S+   ++      L+  I S   + +SL+V + S  V+   L  ++ SL+
Sbjct: 285 VVFISLIVVISSLIVVITS----LVVVITSLVVVITSLIVVITSLVVVITSLVVVITSLI 340

Query: 719 STYLLLST 726
              + LST
Sbjct: 341 VVIIPLST 348


>gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapiens]
          Length = 1502

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 212  GIDTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYG---NDGKTTFIFTSDHGMTDW 268
            G + NG + R S    +    K     K + S    +Y    +D      FT+       
Sbjct: 1131 GDEENGFSDRTSKSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRK- 1189

Query: 269  GSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKE 308
            G H        L+P+ TW  GI  P   S Q+ DD  +K+
Sbjct: 1190 GRHRGSEEDPLLSPVETWKGGIDNPAITSDQELDDKKMKK 1229


>gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapiens]
          Length = 1501

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 212  GIDTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYG---NDGKTTFIFTSDHGMTDW 268
            G + NG + R S    +    K     K + S    +Y    +D      FT+       
Sbjct: 1131 GDEENGFSDRTSKSHGERRPSKYKYKSKTLFSKAKSYYRRTHSDASDDEAFTTSKTKRK- 1189

Query: 269  GSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKE 308
            G H        L+P+ TW  GI  P   S Q+ DD  +K+
Sbjct: 1190 GRHRGSEEDPLLSPVETWKGGIDNPAITSDQELDDKKMKK 1229


>gi|171184408 solute carrier family 6 (neurotransmitter transporter,
           betaine/GABA), member 12 [Homo sapiens]
          Length = 614

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 604 VFPLMPVVGRKPDISLVMGAGLLVLL-LSLC-----VVTSLMKRKDSFIKEELLVHLLQV 657
           ++ L P + R  D  + M AG  +    ++C      + S  K  ++  K+ + +  L  
Sbjct: 268 IYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNS 327

Query: 658 LSTVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSL 717
            ++ ++ +VV+S    + ++QG+P+     S   LA  +  P   + +   +L+S L  +
Sbjct: 328 ATSFVAGFVVFSILGFMSQEQGVPISEVAESGPGLA-FIAFPKAVTMMPLSQLWSCLFFI 386

Query: 718 MSTYLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSG 755
           M  +L L + +     + + CL+   I++    L++SG
Sbjct: 387 MLIFLGLDSQF-----VCVECLVTASIDMFPRQLRKSG 419


>gi|171184406 solute carrier family 6 (neurotransmitter transporter,
           betaine/GABA), member 12 [Homo sapiens]
          Length = 614

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 604 VFPLMPVVGRKPDISLVMGAGLLVLL-LSLC-----VVTSLMKRKDSFIKEELLVHLLQV 657
           ++ L P + R  D  + M AG  +    ++C      + S  K  ++  K+ + +  L  
Sbjct: 268 IYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNS 327

Query: 658 LSTVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSL 717
            ++ ++ +VV+S    + ++QG+P+     S   LA  +  P   + +   +L+S L  +
Sbjct: 328 ATSFVAGFVVFSILGFMSQEQGVPISEVAESGPGLA-FIAFPKAVTMMPLSQLWSCLFFI 386

Query: 718 MSTYLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSG 755
           M  +L L + +     + + CL+   I++    L++SG
Sbjct: 387 MLIFLGLDSQF-----VCVECLVTASIDMFPRQLRKSG 419


>gi|171184404 solute carrier family 6 (neurotransmitter transporter,
           betaine/GABA), member 12 [Homo sapiens]
          Length = 614

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 604 VFPLMPVVGRKPDISLVMGAGLLVLL-LSLC-----VVTSLMKRKDSFIKEELLVHLLQV 657
           ++ L P + R  D  + M AG  +    ++C      + S  K  ++  K+ + +  L  
Sbjct: 268 IYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNS 327

Query: 658 LSTVLSMYVVYSTQSSLLRKQGLPLMNQIISWATLASSLVVPLLSSPVLFQRLFSILLSL 717
            ++ ++ +VV+S    + ++QG+P+     S   LA  +  P   + +   +L+S L  +
Sbjct: 328 ATSFVAGFVVFSILGFMSQEQGVPISEVAESGPGLA-FIAFPKAVTMMPLSQLWSCLFFI 386

Query: 718 MSTYLLLSTGYEALFPLVLSCLMFVWINIEQETLQQSG 755
           M  +L L + +     + + CL+   I++    L++SG
Sbjct: 387 MLIFLGLDSQF-----VCVECLVTASIDMFPRQLRKSG 419


>gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7
           [Homo sapiens]
          Length = 458

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 214 DTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYGNDGKTTFIFTSDHGMT 266
           D+ GH + P S + +  +++VD  V  +       +  D +   I TSDHGMT
Sbjct: 199 DSTGHRYGPESPERREMVRQVDRTVGYLRESIARNHLTD-RLNLIITSDHGMT 250


>gi|207450721 ganglioside induced differentiation associated protein
           2 isoform b [Homo sapiens]
          Length = 496

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 172 TKLDTWVF-----DNVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPS 223
           +K+ TW F       +KD  HH  +   LFS I+ E+I F   +L  D    + R S
Sbjct: 433 SKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARVRSTRSS 489


>gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Homo
           sapiens]
          Length = 222

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/87 (22%), Positives = 41/87 (47%)

Query: 627 VLLLSLCVVTSLMKRKDSFIKEELLVHLLQVLSTVLSMYVVYSTQSSLLRKQGLPLMNQI 686
           ++L SLCV+ SL K++D  ++   + +    L  ++S+ V+  +   ++  +    +   
Sbjct: 118 IILGSLCVLLSLGKKRDYLLRPASMFYAFAGLCILVSVEVMRQSVKRMIDSEDTVWIEYY 177

Query: 687 ISWATLASSLVVPLLSSPVLFQRLFSI 713
            SW+   +     LL    L   LFS+
Sbjct: 178 YSWSFACACAAFILLFLGGLALLLFSL 204


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.141    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,211,089
Number of Sequences: 37866
Number of extensions: 1374259
Number of successful extensions: 4197
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4162
Number of HSP's gapped (non-prelim): 34
length of query: 931
length of database: 18,247,518
effective HSP length: 112
effective length of query: 819
effective length of database: 14,006,526
effective search space: 11471344794
effective search space used: 11471344794
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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