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Search of human proteins with 28629871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28629871 hypothetical protein LOC140701 [Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28629871 hypothetical protein LOC140701 [Homo sapiens] 971 0.0
gi|15100151 HLA-B associated transcript 5 [Homo sapiens] 524 e-149
gi|239753043 PREDICTED: hypothetical protein [Homo sapiens] 36 0.066
gi|32528310 abhydrolase domain containing 12B isoform c [Homo sa... 36 0.066
gi|32451492 abhydrolase domain containing 12B isoform b [Homo sa... 36 0.066
gi|23510451 N-acylaminoacyl-peptide hydrolase [Homo sapiens] 35 0.15
gi|156119609 YY2 transcription factor [Homo sapiens] 34 0.33
gi|71051602 family with sequence similarity 108, member B1 isofo... 34 0.33
gi|71051600 family with sequence similarity 108, member B1 isofo... 34 0.33
gi|194306564 hypothetical protein LOC81926 isoform 2 [Homo sapiens] 33 0.73
gi|194306562 hypothetical protein LOC81926 isoform 1 [Homo sapiens] 33 0.73
gi|117306169 prolylcarboxypeptidase isoform 2 preproprotein [Hom... 32 1.2
gi|4826940 prolylcarboxypeptidase isoform 1 preproprotein [Homo ... 32 1.2
gi|151301175 hypothetical protein LOC58489 [Homo sapiens] 32 1.6
gi|50658087 abhydrolase domain containing 4 [Homo sapiens] 31 2.1
gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens] 30 4.7
gi|190194374 hypothetical protein LOC144811 [Homo sapiens] 30 4.7
gi|190194372 hypothetical protein LOC144811 [Homo sapiens] 30 4.7
gi|4507955 YY1 transcription factor [Homo sapiens] 30 6.1
gi|221316588 biphenyl hydrolase-like [Homo sapiens] 29 8.0
gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens] 29 8.0
>gi|28629871 hypothetical protein LOC140701 [Homo sapiens]
Length = 469
Score = 971 bits (2511), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MCVICFVKALVRVFKIYLTASYTYPFRGWPVAFRWDDVRAVGRSSSHRALTCAAAAAGVW 60
MCVICFVKALVRVFKIYLTASYTYPFRGWPVAFRWDDVRAVGRSSSHRALTCAAAAAGVW
Sbjct: 1 MCVICFVKALVRVFKIYLTASYTYPFRGWPVAFRWDDVRAVGRSSSHRALTCAAAAAGVW 60
Query: 61 LLRDETLGGDALGRPPRGARSQAQCLLQQLRELPGQLASYALAHSLGRWLVYPGSVSLMT 120
LLRDETLGGDALGRPPRGARSQAQCLLQQLRELPGQLASYALAHSLGRWLVYPGSVSLMT
Sbjct: 61 LLRDETLGGDALGRPPRGARSQAQCLLQQLRELPGQLASYALAHSLGRWLVYPGSVSLMT 120
Query: 121 RALLPLLQQGQERLVERYHGRRAKLVACDGNEIDTMFMDRRQHPGSHVHGPRLVICCEGN 180
RALLPLLQQGQERLVERYHGRRAKLVACDGNEIDTMFMDRRQHPGSHVHGPRLVICCEGN
Sbjct: 121 RALLPLLQQGQERLVERYHGRRAKLVACDGNEIDTMFMDRRQHPGSHVHGPRLVICCEGN 180
Query: 181 AGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAH 240
AGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAH
Sbjct: 181 AGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAH 240
Query: 241 LVVYGWSVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN 300
LVVYGWSVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN
Sbjct: 241 LVVYGWSVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN 300
Query: 301 LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRLRPLSPGDVEGNRGNELLLRLLEHRYPVVM 360
LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRLRPLSPGDVEGNRGNELLLRLLEHRYPVVM
Sbjct: 301 LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRLRPLSPGDVEGNRGNELLLRLLEHRYPVVM 360
Query: 361 AREGRAVVTRWLRAGSLAQEAAFYARYRVDEDWCLALLRSYRARCEEELEGEEALGPHGP 420
AREGRAVVTRWLRAGSLAQEAAFYARYRVDEDWCLALLRSYRARCEEELEGEEALGPHGP
Sbjct: 361 AREGRAVVTRWLRAGSLAQEAAFYARYRVDEDWCLALLRSYRARCEEELEGEEALGPHGP 420
Query: 421 AFPWLVGQGLSSRRRRRLALFLARKHLKNVEATHFSPLEPEEFQLPWRL 469
AFPWLVGQGLSSRRRRRLALFLARKHLKNVEATHFSPLEPEEFQLPWRL
Sbjct: 421 AFPWLVGQGLSSRRRRRLALFLARKHLKNVEATHFSPLEPEEFQLPWRL 469
>gi|15100151 HLA-B associated transcript 5 [Homo sapiens]
Length = 558
Score = 524 bits (1350), Expect = e-149
Identities = 258/450 (57%), Positives = 328/450 (72%), Gaps = 38/450 (8%)
Query: 20 ASYTYPFRGWPVAFRWDDVRAVGRSSSHRALTCAAAAAGVWLLRDETLGGDALGRPPRGA 79
A+Y + FR WPV F W++ SS + + GV LLR E L
Sbjct: 147 ANYNFDFRSWPVDFHWEE------PSSRKESRGGPSRRGVALLRPEPLH----------- 189
Query: 80 RSQAQCLLQQLRELPGQLASYALAHSLGRWLVYPGSVSLMTRALLPLLQQGQERLVERYH 139
R A LL ++++LP Q+ SY +AH+LGR ++YPGSV L+ +AL+P+L QGQ RLVE +
Sbjct: 190 RGTADTLLNRVKKLPCQITSYLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECN 249
Query: 140 GRRAKLVACDGNEIDTMFMDRRQHPGSHVHGPRLVICCEGNAGFYEMGCLSAPLEAGYSV 199
GRRAKL+ACDGNEIDTMF+DRR + G +LVICCEGNAGFYE+GC+S PLEAGYSV
Sbjct: 250 GRRAKLLACDGNEIDTMFVDRRGT--AEPQGQKLVICCEGNAGFYEVGCVSTPLEAGYSV 307
Query: 200 LGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWATMT 259
LGWNHPGF STGVPFPQ++ANAMDVVV++A+HRL F P +++Y WS+GGFTATWA M+
Sbjct: 308 LGWNHPGFAGSTGVPFPQNEANAMDVVVQFAIHRLGFQPQDIIIYAWSIGGFTATWAAMS 367
Query: 260 YPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLLRR 319
YP++ A++LDA+FDDLVPLALKVMP SW+GLV RTVR+H NLN AEQLC Y GPVLL+RR
Sbjct: 368 YPDVSAMILDASFDDLVPLALKVMPDSWRGLVTRTVRQHLNLNNAEQLCRYQGPVLLIRR 427
Query: 320 TQDDVVSTSGRLRPLSPGDVEGNRGNELLLRLLEHRYPVVMAREGRAVVTRWLRAGSLAQ 379
T+D++++T+ P D+ NRGN+LLL+LL+HRYP VMA EG VV +WL A S +
Sbjct: 428 TKDEIITTT------VPEDIMSNRGNDLLLKLLQHRYPRVMAEEGLRVVRQWLEASSQLE 481
Query: 380 EAAFYARYRVDEDWCLALLRSYRARCEEELEGEEALGPHGPAFPWLVGQGLSSRRRRRLA 439
EA+ Y+R+ V+EDWCL++LRSY+A HGP FPW VG+ +S+ RR+LA
Sbjct: 482 EASIYSRWEVEEDWCLSVLRSYQAE-------------HGPDFPWSVGEDMSADGRRQLA 528
Query: 440 LFLARKHLKNVEATHFSPLEPEEFQLPWRL 469
LFLARKHL N EATH +PL + FQ+PW L
Sbjct: 529 LFLARKHLHNFEATHCTPLPAQNFQMPWHL 558
>gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]
Length = 451
Score = 36.2 bits (82), Expect = 0.066
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 198 SVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWAT 257
++ +++ G+G+S+G P ++ +D + R P +++YG S+G
Sbjct: 214 NIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLA 273
Query: 258 MTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLL 317
Y E A+VL + + +A P + K E++ PVL++
Sbjct: 274 SRY-ECAAVVLHSPLTSGMRVA---FPDTKKTYCFDAFPN------IEKVSKITSPVLII 323
Query: 318 RRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
T+D+V+ S L + + P VEG R N++ L
Sbjct: 324 HGTEDEVIDFSHGLALYERCPKAVEPLWVEGTRHNDIEL 362
>gi|32528310 abhydrolase domain containing 12B isoform c [Homo
sapiens]
Length = 285
Score = 36.2 bits (82), Expect = 0.066
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 178 EGNAGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFP 237
E A + + + + G+ VL ++ GFG STG P + V E+ R
Sbjct: 73 EHRAASHRLKLVKVLSDGGFHVLSVDYRGFGDSTGKPTEEGLTTDAICVYEWTKARSGIT 132
Query: 238 PAHLVVYGWSVGGFTATWATMTYPELG----ALVLDATFDDL 275
P + ++G S+G AT A E G A+VL+A F ++
Sbjct: 133 P--VCLWGHSLGTGVATNAAKVLEEKGCPVDAIVLEAPFTNM 172
>gi|32451492 abhydrolase domain containing 12B isoform b [Homo
sapiens]
Length = 255
Score = 36.2 bits (82), Expect = 0.066
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 178 EGNAGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFP 237
E A + + + + G+ VL ++ GFG STG P + V E+ R
Sbjct: 43 EHRAASHRLKLVKVLSDGGFHVLSVDYRGFGDSTGKPTEEGLTTDAICVYEWTKARSGIT 102
Query: 238 PAHLVVYGWSVGGFTATWATMTYPELG----ALVLDATFDDL 275
P + ++G S+G AT A E G A+VL+A F ++
Sbjct: 103 P--VCLWGHSLGTGVATNAAKVLEEKGCPVDAIVLEAPFTNM 142
>gi|23510451 N-acylaminoacyl-peptide hydrolase [Homo sapiens]
Length = 732
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 196 GYSVLGWNH---PGFGSSTGVPFP----QHDANAMDVVVEYALHRLHFPPAHLVVYGWSV 248
G++VL N+ GFG + + P D + VE L HF +H+ + G S
Sbjct: 529 GFAVLLVNYRGSTGFGQDSILSLPGNVGHQDVKDVQFAVEQVLQEEHFDASHVALMGGSH 588
Query: 249 GGFTATWATMTYPE 262
GGF + YPE
Sbjct: 589 GGFISCHLIGQYPE 602
>gi|156119609 YY2 transcription factor [Homo sapiens]
Length = 372
Score = 33.9 bits (76), Expect = 0.33
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 136 ERYHGRRAKLVACDGNEIDTMFMD---RRQHPGSHVHGPRLVICCEGNAGFYE 185
+R G K V C + + MF D R+H H+HGPR+ +C E F E
Sbjct: 244 KRSKGEPPKTVPCSYSGCEKMFRDYAAMRKH--LHIHGPRVHVCAECGKAFLE 294
>gi|71051602 family with sequence similarity 108, member B1 isoform
2 [Homo sapiens]
Length = 288
Score = 33.9 bits (76), Expect = 0.33
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 132 ERLVERYHGRRAKLVAC------DGNEIDTMFMDRRQHPGSHVHGPRLVICCEGNAGFYE 185
ER +Y R + C GN I MF+ R P + ++ GNA +
Sbjct: 52 ERADWQYSSREKDAIECFMTRTSKGNRIACMFV--RCSPNAKY----TLLFSHGNA--VD 103
Query: 186 MGCLSA-----PLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAH 240
+G +S+ ++ +++ G+G+S+G P ++ ++ R P +
Sbjct: 104 LGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIRPEN 163
Query: 241 LVVYGWSVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN 300
+++YG S+G + Y E A++L + + +A P + K
Sbjct: 164 VIIYGQSIGTVPSVDLAARY-ESAAVILHSPLTSGMRVAF---PDTKKTYCFDAFPN--- 216
Query: 301 LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
+++ PVL++ T+D+V+ S L RP+ P VEG N++ L
Sbjct: 217 ---IDKISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVEL 269
>gi|71051600 family with sequence similarity 108, member B1 isoform
1 [Homo sapiens]
Length = 293
Score = 33.9 bits (76), Expect = 0.33
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 132 ERLVERYHGRRAKLVAC------DGNEIDTMFMDRRQHPGSHVHGPRLVICCEGNAGFYE 185
ER +Y R + C GN I MF+ R P + ++ GNA +
Sbjct: 52 ERADWQYSSREKDAIECFMTRTSKGNRIACMFV--RCSPNAKY----TLLFSHGNA--VD 103
Query: 186 MGCLSA-----PLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAH 240
+G +S+ ++ +++ G+G+S+G P ++ ++ R P +
Sbjct: 104 LGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIRPEN 163
Query: 241 LVVYGWSVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFN 300
+++YG S+G + Y E A++L + + +A P + K
Sbjct: 164 VIIYGQSIGTVPSVDLAARY-ESAAVILHSPLTSGMRVAF---PDTKKTYCFDAFPN--- 216
Query: 301 LNVAEQLCCYPGPVLLLRRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
+++ PVL++ T+D+V+ S L RP+ P VEG N++ L
Sbjct: 217 ---IDKISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVEL 269
>gi|194306564 hypothetical protein LOC81926 isoform 2 [Homo sapiens]
Length = 310
Score = 32.7 bits (73), Expect = 0.73
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 198 SVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWAT 257
++ +++ G+G+S+G P ++ +D + R P +++YG S+G
Sbjct: 141 NIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLA 200
Query: 258 MTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLL 317
Y E A+VL + + +A P + K E++ PVL++
Sbjct: 201 SRY-ECAAVVLHSPLTSGMRVA---FPDTKKTYCFDAFPN------IEKVSKITSPVLII 250
Query: 318 RRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
T+D+V+ S L + + P VEG N++ L
Sbjct: 251 HGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIEL 289
>gi|194306562 hypothetical protein LOC81926 isoform 1 [Homo sapiens]
Length = 361
Score = 32.7 bits (73), Expect = 0.73
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 198 SVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWAT 257
++ +++ G+G+S+G P ++ +D + R P +++YG S+G
Sbjct: 192 NIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLA 251
Query: 258 MTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLL 317
Y E A+VL + + +A P + K E++ PVL++
Sbjct: 252 SRY-ECAAVVLHSPLTSGMRVA---FPDTKKTYCFDAFPN------IEKVSKITSPVLII 301
Query: 318 RRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
T+D+V+ S L + + P VEG N++ L
Sbjct: 302 HGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIEL 340
>gi|117306169 prolylcarboxypeptidase isoform 2 preproprotein [Homo
sapiens]
Length = 517
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 241 LVVYGWSVGGFTATWATMTYPEL--GALVLDA---TFDDLVP 277
++ G S GG A W M YP + GAL A F+DLVP
Sbjct: 194 VIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVP 235
>gi|4826940 prolylcarboxypeptidase isoform 1 preproprotein [Homo
sapiens]
Length = 496
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 241 LVVYGWSVGGFTATWATMTYPEL--GALVLDA---TFDDLVP 277
++ G S GG A W M YP + GAL A F+DLVP
Sbjct: 173 VIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVP 214
>gi|151301175 hypothetical protein LOC58489 [Homo sapiens]
Length = 329
Score = 31.6 bits (70), Expect = 1.6
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 198 SVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWAT 257
++ +++ G+G S+G P ++ +D + R P ++++YG S+G
Sbjct: 162 NIFSYDYSGYGVSSGKPSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVDLA 221
Query: 258 MTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLL 317
Y E A++L + + +A P + K +++ PVL++
Sbjct: 222 SRY-ECAAVILHSPLMSGLRVA---FPDTRKTYCFDAFPS------IDKISKVTSPVLVI 271
Query: 318 RRTQDDVVSTSGRL-------RPLSPGDVEGNRGNELLL 349
T+D+V+ S L R + P VEG N++ L
Sbjct: 272 HGTEDEVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIEL 310
>gi|50658087 abhydrolase domain containing 4 [Homo sapiens]
Length = 342
Score = 31.2 bits (69), Expect = 2.1
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 106 LGRWLVY--PGSVSLMTRALLPLLQQGQERLVERYHGRRAKLVACDGNEIDTMFMDRRQH 163
L WL P S+S + +LQ Q + + RY + + N+I T+ + Q+
Sbjct: 13 LSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARY------VSLPNQNKIWTVTVSPEQN 66
Query: 164 ---PGSHVHGPRLVICCEGNAGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDA 220
P VHG G G + + S L A ++ ++ GFG S+ FP+
Sbjct: 67 DRTPLVMVHG------FGGGVGLWILNMDS--LSARRTLHTFDLLGFGRSSRPAFPRDPE 118
Query: 221 NAMD-VVVEYALHRLHFPPAHLVVYGWSVGGFTATWATMTYPE 262
A D V R +++ G S+GGF AT ++ YP+
Sbjct: 119 GAEDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPD 161
>gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens]
Length = 555
Score = 30.0 bits (66), Expect = 4.7
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 170 GPRLVICCEGNAGFYEMGC-LSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVE 228
GP + +C +Y + A +AGY VL + G+G S+ P+ + M+V+ +
Sbjct: 258 GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAP--PEIEEYCMEVLCK 315
Query: 229 YA---LHRLHFPPAHLVVYGWSVGGFTATWATMTYPE 262
L +L A + + W GG + + YPE
Sbjct: 316 EMVTFLDKLGLSQAVFIGHDW--GGMLVWYMALFYPE 350
>gi|190194374 hypothetical protein LOC144811 [Homo sapiens]
Length = 430
Score = 30.0 bits (66), Expect = 4.7
Identities = 21/71 (29%), Positives = 28/71 (39%)
Query: 247 SVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQ 306
S G T +T LGA + F D V A V WKG ++ N +AE
Sbjct: 264 SYDGITTNQRGVTIAALGADCIPIVFADPVKKACGVAHAGWKGTLLGVAMATVNAMIAEY 323
Query: 307 LCCYPGPVLLL 317
C V++L
Sbjct: 324 GCSLEDIVVVL 334
>gi|190194372 hypothetical protein LOC144811 [Homo sapiens]
Length = 430
Score = 30.0 bits (66), Expect = 4.7
Identities = 21/71 (29%), Positives = 28/71 (39%)
Query: 247 SVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQ 306
S G T +T LGA + F D V A V WKG ++ N +AE
Sbjct: 264 SYDGITTNQRGVTIAALGADCIPIVFADPVKKACGVAHAGWKGTLLGVAMATVNAMIAEY 323
Query: 307 LCCYPGPVLLL 317
C V++L
Sbjct: 324 GCSLEDIVVVL 334
>gi|4507955 YY1 transcription factor [Homo sapiens]
Length = 414
Score = 29.6 bits (65), Expect = 6.1
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 144 KLVACDGNEIDTMFMDR---RQHPGSHVHGPRLVICCEGNAGFYE 185
+ +AC MF D R+H H HGPR+ +C E F E
Sbjct: 294 RTIACPHKGCTKMFRDNSAMRKH--LHTHGPRVHVCAECGKAFVE 336
>gi|221316588 biphenyl hydrolase-like [Homo sapiens]
Length = 291
Score = 29.3 bits (64), Expect = 8.0
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 197 YSVLGWNHPGFGSST----GVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFT 252
++V+ W+ G+G S P + +A D V + L F L+ GWS GG T
Sbjct: 89 FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVD--LMKALKFKKVSLL--GWSDGGIT 144
Query: 253 ATWATMTYP 261
A A YP
Sbjct: 145 ALIAAAKYP 153
>gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]
Length = 4588
Score = 29.3 bits (64), Expect = 8.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 206 GFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVV 243
G S+TG PF + A DVVVE AH+VV
Sbjct: 2030 GVLSTTGTPFDREQQEAFDVVVEVTEEHKPSAVAHVVV 2067
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,034,953
Number of Sequences: 37866
Number of extensions: 946416
Number of successful extensions: 2550
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2529
Number of HSP's gapped (non-prelim): 27
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.