Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C13orf31 Sequence: fasta or formatted (430aa) NCBI GI: 190194374
Description:

hypothetical protein LOC144811

Not currently referenced in the text

Other entries for this name:
alt mRNA {430aa} hypothetical protein LOC144811
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         30           2
 C cysteine            3.5         15           2
 D aspartate           4.9         21           1
 E glutamate           5.6         24           2
 F phenylalanine       5.6         24           2
 G glycine             6.3         27           2
 H histidine           2.8         12           2
 I isoleucine          9.1         39           2
 K lysine              5.6         24           2
 L leucine             9.5         41           2
 M methionine          1.6          7           1
 N asparagine          5.3         23           1
 P proline             4.0         17           1
 Q glutamine           4.4         19           1
 R arginine            4.4         19           2
 S serine              6.5         28           3
 T threonine           6.0         26           2
 V valine              5.6         24           3
 W tryptophan          0.5          2           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC144811 
C13orf31              1.000   hypothetical protein LOC144811 
CXorf59               0.008   hypothetical protein LOC286464 
ADAMTS12              0.007   ADAM metallopeptidase with thrombospondin type 1 mot...
WDR19                 0.007   WD repeat domain 19 
C20orf135             0.006   hypothetical protein LOC140701 
RFPL4A                0.006   ret finger protein-like 4A 
ALS2CR8               0.006   amyotrophic lateral sclerosis 2 (juvenile) chromoso...
ALS2CR8               0.006   amyotrophic lateral sclerosis 2 (juvenile) chromoso...
TARBP1                0.006   TAR RNA binding protein 1 
COPB2                 0.005   coatomer protein complex, subunit beta 2 (beta prime)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press