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Search of human proteins with 28416911
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28416911 interleukin 28 receptor, alpha isoform 3 [Homo
sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28416911 interleukin 28 receptor, alpha isoform 3 [Homo sapiens] 514 e-146
gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens] 470 e-133
gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens] 470 e-133
gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens] 63 3e-10
gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens] 55 4e-08
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 55 6e-08
gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens] 52 4e-07
gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens] 44 2e-04
gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens] 38 0.007
gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens] 37 0.020
gi|239756093 PREDICTED: hypothetical protein [Homo sapiens] 34 0.13
gi|239750624 PREDICTED: hypothetical protein XP_002347476 [Homo ... 34 0.13
gi|119220552 sidekick 1 [Homo sapiens] 33 0.17
gi|15147240 brother of CDO [Homo sapiens] 32 0.39
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens] 32 0.50
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 32 0.66
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 32 0.66
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 32 0.66
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 32 0.66
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens] 31 0.86
gi|194239697 solute carrier family 1 (glutamate transporter), me... 31 0.86
gi|28559023 interleukin 5 receptor, alpha isoform 2 precursor [H... 31 1.1
gi|28559021 interleukin 5 receptor, alpha isoform 1 precursor [H... 31 1.1
gi|28559027 interleukin 5 receptor, alpha isoform 1 precursor [H... 31 1.1
gi|28559025 interleukin 5 receptor, alpha isoform 3 precursor [H... 31 1.1
gi|28559031 interleukin 5 receptor, alpha isoform 3 precursor [H... 31 1.1
gi|28559029 interleukin 5 receptor, alpha isoform 2 precursor [H... 31 1.1
gi|14550407 complement component 2 isoform 1 preproprotein [Homo... 30 1.5
gi|104487002 protein tyrosine phosphatase, receptor type, D isof... 30 1.9
gi|4506309 protein tyrosine phosphatase, receptor type, D isofor... 30 1.9
>gi|28416911 interleukin 28 receptor, alpha isoform 3 [Homo sapiens]
Length = 244
Score = 514 bits (1323), Expect = e-146
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 60
MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ
Sbjct: 1 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 60
Query: 61 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 120
SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL
Sbjct: 61 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 120
Query: 121 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ
Sbjct: 121 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
Query: 181 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPGLFWTHTPCGNLSAQQT 240
PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPGLFWTHTPCGNLSAQQT
Sbjct: 181 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPGLFWTHTPCGNLSAQQT 240
Query: 241 RVRE 244
RVRE
Sbjct: 241 RVRE 244
>gi|25014103 interleukin 28 receptor, alpha isoform 1 [Homo sapiens]
Length = 520
Score = 470 bits (1209), Expect = e-133
Identities = 224/227 (98%), Positives = 224/227 (98%)
Query: 1 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 60
MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ
Sbjct: 1 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 60
Query: 61 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 120
SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL
Sbjct: 61 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 120
Query: 121 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ
Sbjct: 121 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
Query: 181 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPGLFW 227
PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVP W
Sbjct: 181 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANW 227
>gi|28416909 interleukin 28 receptor, alpha isoform 2 [Homo sapiens]
Length = 491
Score = 470 bits (1209), Expect = e-133
Identities = 224/227 (98%), Positives = 224/227 (98%)
Query: 1 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 60
MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ
Sbjct: 1 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ 60
Query: 61 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 120
SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL
Sbjct: 61 SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYL 120
Query: 121 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ
Sbjct: 121 FEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
Query: 181 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPGLFW 227
PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVP W
Sbjct: 181 PVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANW 227
>gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]
Length = 231
Score = 62.8 bits (151), Expect = 3e-10
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 27 PQNVTLLSQNFSVYLTWLPG---LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCS 83
PQ V S+NF L W PG GN YFV Y+ +R+W+ E+C GT+EL C
Sbjct: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIYG-QRQWKNKEDCWGTQELSCD 87
Query: 84 MMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQ 134
+ + D+ + GRVR S S S W + +E + PPV+ +TQ
Sbjct: 88 LTS-ETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQ 137
>gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens]
Length = 130
Score = 55.5 bits (132), Expect = 4e-08
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 27 PQNVTLLSQNFSVYLTWLPG---LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCS 83
PQ V S+NF L W PG GN YFV Y+ +R+W+ E+C GT+EL C
Sbjct: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIYG-QRQWKNKEDCWGTQELSCD 87
Query: 84 MMCLKKQDLYNKFKGRVRTVSPSSKSPW 111
+ + D+ + GRVR S S S W
Sbjct: 88 LTS-ETSDIQEPYYGRVRAASAGSYSEW 114
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 55.1 bits (131), Expect = 6e-08
Identities = 54/190 (28%), Positives = 75/190 (39%), Gaps = 28/190 (14%)
Query: 9 PLLLCLLQAAPGRP------RLAPPQNVTLLSQNFSVYLTWLPGLG-NPQDVTYFVAYQS 61
PLLL LL A GR L P N+T LS N L W P G VTY V Y
Sbjct: 16 PLLLLLLAAPWGRAVPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFI 75
Query: 62 SPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLF 121
+++W EC C + + D +++ +V+ + + S W ES
Sbjct: 76 YG-QKKWLNKSECRNINRTYCDLSA-ETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFL 133
Query: 122 EVEPAPPVLVLTQTEEILSANAT---------YQLPPCMPPL--DLKYEVAF-------- 162
E + PP + LT E+ +S T LP M + +LKY V+
Sbjct: 134 ETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT 193
Query: 163 WKEGAGNKTL 172
W + N TL
Sbjct: 194 WSQCVTNHTL 203
>gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]
Length = 263
Score = 52.4 bits (124), Expect = 4e-07
Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 37/142 (26%)
Query: 27 PQNVTLLSQNFSVYLTWLPG---LGNPQDVTYFVAYQ-----------SSPT-------- 64
PQ V S+NF L W PG GN YFV Y+ P+
Sbjct: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIMFSCSMKSSHQKPSGCWQHISC 88
Query: 65 ------------RRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWV 112
+R+W+ E+C GT+EL C + + D+ + GRVR S S S W
Sbjct: 89 NFPGCRTLAKYGQRQWKNKEDCWGTQELSCDLTS-ETSDIQEPYYGRVRAASAGSYSEWS 147
Query: 113 ESEYLDYLFEVEPAPPVLVLTQ 134
+ +E + PPV+ +TQ
Sbjct: 148 MTPRFTPWWETKIDPPVMNITQ 169
>gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens]
Length = 311
Score = 43.5 bits (101), Expect = 2e-04
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 24 LAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQ----SSPTRRRWREVEECAGTKE 79
L PQN+++LS N L W P + + V Y V YQ S T W C+ T+
Sbjct: 35 LPAPQNLSVLSTNMKHLLMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEG 94
Query: 80 LLCSMM-CLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQTEEI 138
C + + YN RVR S S W L + F +LT+
Sbjct: 95 PECDVTDDITATVPYNL---RVRATLGSQTSAW---SILKHPFNRNST----ILTRPGME 144
Query: 139 LSANATYQLPPCMPPLDLKYE--VAFW-KEGAGNKTLFPVTPHGQPVQI-TLQPAASEHH 194
++ + + L + L ++E VA+W +E + + V G PV + T++P A+ +
Sbjct: 145 ITKDG-FHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAA--Y 201
Query: 195 CLSARTIYTFSVPKYSKFSKPTCFLLEVPG 224
C+ A+T + ++ +YS FS+ C +EV G
Sbjct: 202 CVKAQT-FVKAIGRYSAFSQTEC--VEVQG 228
>gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens]
Length = 557
Score = 38.1 bits (87), Expect = 0.007
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 7/159 (4%)
Query: 14 LLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREVEE 73
+L AA G L PQ V + + + L W + +VT+ YQ + W ++
Sbjct: 20 VLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVTFSFDYQKT-GMDNWIKLSG 78
Query: 74 CAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPPVLVLT 133
C C+ L K ++Y + K R+R ++ S W E + + + PP + L
Sbjct: 79 CQNITSTKCNFSSL-KLNVYEEIKLRIRAEKENTSS-WYEVDSFTPFRKAQIGPPEVHLE 136
Query: 134 QTEEI----LSANATYQLPPCMPPLDLKYEVAFWKEGAG 168
++ +S + + L Y + WK +G
Sbjct: 137 AEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSG 175
Score = 38.1 bits (87), Expect = 0.007
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 24 LAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRR-------RWREVEECAG 76
L PP+N+ + QN + L W N +T+ V + + +R +W+++ +C
Sbjct: 229 LPPPENIEVSVQNQNYVLKWDYTYAN---MTFQVQWLHAFLKRNPGNHLYKWKQIPDCEN 285
Query: 77 TKELLCSMMCLKKQDLYNK--FKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQ 134
K + C+ Q+++ K + RV+ ++ S W E D + PPV +
Sbjct: 286 VK----TTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRS 341
Query: 135 TEE----ILSANATYQLPPCMPPLDLKYEVAFWK 164
+ + A P + L YE+ FW+
Sbjct: 342 LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWE 375
>gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens]
Length = 325
Score = 36.6 bits (83), Expect = 0.020
Identities = 54/215 (25%), Positives = 82/215 (38%), Gaps = 27/215 (12%)
Query: 13 CLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREVE 72
CLL +A G + PP+NV + S NF L W ++T+ Y S + +
Sbjct: 12 CLLVSALGM--VPPPENVRMNSVNFKNILQWESPAFAKGNLTFTAQYLSYRIFQ-----D 64
Query: 73 ECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEY--LDYLFEVEPAPPVL 130
+C T C L K Y RVR S WV + +D P V
Sbjct: 65 KCMNTTLTECDFSSLSK---YGDHTLRVRAEFADEHSDWVNITFCPVDDTIIGPPGMQVE 121
Query: 131 VLTQT-------EEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTP-HGQPV 182
VL + +I + T+ + Y V +WK G K F +TP + V
Sbjct: 122 VLADSLHMRFLAPKIENEYETWTMKNVYN--SWTYNVQYWKNGTDEK--FQITPQYDFEV 177
Query: 183 QITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTC 217
L+P + +C+ R + K ++S+P C
Sbjct: 178 LRNLEPWTT--YCVQVRG-FLPDRNKAGEWSEPVC 209
>gi|239756093 PREDICTED: hypothetical protein [Homo sapiens]
Length = 343
Score = 33.9 bits (76), Expect = 0.13
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 128 PVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEG-AGNKTLFPVTPH 178
P + Q + +LS + LPPC PPL + + + G A L+P++PH
Sbjct: 46 PEGAMDQGDPLLSPFLAFSLPPCRPPLPSHFALWVIQVGEARTALLYPISPH 97
>gi|239750624 PREDICTED: hypothetical protein XP_002347476 [Homo
sapiens]
Length = 343
Score = 33.9 bits (76), Expect = 0.13
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 128 PVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEG-AGNKTLFPVTPH 178
P + Q + +LS + LPPC PPL + + + G A L+P++PH
Sbjct: 46 PEGAMDQGDPLLSPFLAFSLPPCRPPLPSHFALWVIQVGEARTALLYPISPH 97
>gi|119220552 sidekick 1 [Homo sapiens]
Length = 2213
Score = 33.5 bits (75), Expect = 0.17
Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 16/218 (7%)
Query: 7 WGPLLLCLLQAAPGRPRLAPPQNVTLLSQNF---SVYLTWLPGLGNPQDVTYFVAYQSSP 63
WG L + R R APP+ + + S+ L W+PG + YF
Sbjct: 1460 WGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVREL 1519
Query: 64 TRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPW-VESEYLDYLFE 122
R W+ + C + L+ + +K R++ + S + E+E + L +
Sbjct: 1520 PRGEWQTYSSSISHEATACVVDRLRP---FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1576
Query: 123 VEPAPPVLVLTQTEEILSANATYQLPPCMPPLD-------LKYEVAFWKEGAGNKTLFPV 175
V PP V S +Q PP L+ + Y ++ G+G +
Sbjct: 1577 VPGEPPGSVSATPHTTSSVLIQWQ-PPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLK 1635
Query: 176 TPHGQPVQITLQPAASEHHCLSARTIYTFS-VPKYSKF 212
P ++T Q + + S T+ + + KY ++
Sbjct: 1636 NPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRY 1673
>gi|15147240 brother of CDO [Homo sapiens]
Length = 1114
Score = 32.3 bits (72), Expect = 0.39
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 19 PGRPRLAPPQ-----NVTLLSQNFSVYLTWLP-GLGNPQDVTYFVAYQSSPTRRRWREVE 72
P RL+PP+ ++ S+ SVY+TW+P G G ++ V Y+ W
Sbjct: 598 PDHGRLSPPEAPDRPTISTASET-SVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT 656
Query: 73 ECAGTKELLCSMMCLKKQDLYNKFKGRVRTV----SPSSKS-PWVESEYLDYLFEVEPAP 127
L + L+K Y KF+ R + PS+ S P+V S Y ++E A
Sbjct: 657 SAIPPSRLSVEITGLEKGTSY-KFRVRALNMLGESEPSAPSRPYVVSGYSGRVYERPVAG 715
Query: 128 PVLVLT 133
P + T
Sbjct: 716 PYITFT 721
>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
Length = 1007
Score = 32.0 bits (71), Expect = 0.50
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 8 GPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLP 45
GP LL P + APPQ VTL N +V+++W+P
Sbjct: 332 GPDSNVLLLRLPEKVPSAPPQEVTLKPGNGTVFVSWVP 369
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 31.6 bits (70), Expect = 0.66
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 143 ATYQLP--PCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQPVQ 183
A+ LP P PPLD K+ +AF GA +LFP PVQ
Sbjct: 675 ASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQ 717
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 31.6 bits (70), Expect = 0.66
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 143 ATYQLP--PCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQPVQ 183
A+ LP P PPLD K+ +AF GA +LFP PVQ
Sbjct: 675 ASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQ 717
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 31.6 bits (70), Expect = 0.66
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 143 ATYQLP--PCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQPVQ 183
A+ LP P PPLD K+ +AF GA +LFP PVQ
Sbjct: 675 ASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQ 717
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 31.6 bits (70), Expect = 0.66
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 14 LLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREV 71
L+Q P +PRL + + S+ LTW+PG + FV S W++V
Sbjct: 1439 LVQVPPDQPRLTVSK-----TSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDV 1491
>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
Length = 574
Score = 31.2 bits (69), Expect = 0.86
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 28 QNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCL 87
Q+V S NF LTW G D Y + Y++ R W + C C+ + +
Sbjct: 26 QHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTY-GERDWVAKKGCQRITRKSCN-LTV 83
Query: 88 KKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPP 128
+ +L + RV VS +S ++ L PP
Sbjct: 84 ETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPP 124
>gi|194239697 solute carrier family 1 (glutamate transporter),
member 7 [Homo sapiens]
Length = 560
Score = 31.2 bits (69), Expect = 0.86
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 144 TYQLPPC-MPPLDLKYEVAFWKEG-------AGNKTLFPVTPHGQPVQITLQ---PAASE 192
T +L PC P+ L+ VA + G A TL P PH PVQ+ PAAS
Sbjct: 487 TEKLLPCETKPVSLQEIVAAQQNGCVKSVAEASELTLGPTCPHHVPVQVEQDEELPAASL 546
Query: 193 HHC 195
+HC
Sbjct: 547 NHC 549
>gi|28559023 interleukin 5 receptor, alpha isoform 2 precursor [Homo
sapiens]
Length = 333
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 15 LQAAPGRP-----RLAPPQNVT------LLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSP 63
L A PG P L N T L S S++ TWL G P+D YF+ Y+
Sbjct: 118 LHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGS 177
Query: 64 TRRRWREVEECAGTKELLC 82
+E + + + C
Sbjct: 178 WTEECQEYSKDTLGRNIAC 196
>gi|28559021 interleukin 5 receptor, alpha isoform 1 precursor [Homo
sapiens]
Length = 420
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 15 LQAAPGRP-----RLAPPQNVT------LLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSP 63
L A PG P L N T L S S++ TWL G P+D YF+ Y+
Sbjct: 118 LHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGS 177
Query: 64 TRRRWREVEECAGTKELLC 82
+E + + + C
Sbjct: 178 WTEECQEYSKDTLGRNIAC 196
>gi|28559027 interleukin 5 receptor, alpha isoform 1 precursor [Homo
sapiens]
Length = 420
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 15 LQAAPGRP-----RLAPPQNVT------LLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSP 63
L A PG P L N T L S S++ TWL G P+D YF+ Y+
Sbjct: 118 LHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGS 177
Query: 64 TRRRWREVEECAGTKELLC 82
+E + + + C
Sbjct: 178 WTEECQEYSKDTLGRNIAC 196
>gi|28559025 interleukin 5 receptor, alpha isoform 3 precursor [Homo
sapiens]
Length = 335
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 15 LQAAPGRP-----RLAPPQNVT------LLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSP 63
L A PG P L N T L S S++ TWL G P+D YF+ Y+
Sbjct: 118 LHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGS 177
Query: 64 TRRRWREVEECAGTKELLC 82
+E + + + C
Sbjct: 178 WTEECQEYSKDTLGRNIAC 196
>gi|28559031 interleukin 5 receptor, alpha isoform 3 precursor [Homo
sapiens]
Length = 335
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 15 LQAAPGRP-----RLAPPQNVT------LLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSP 63
L A PG P L N T L S S++ TWL G P+D YF+ Y+
Sbjct: 118 LHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGS 177
Query: 64 TRRRWREVEECAGTKELLC 82
+E + + + C
Sbjct: 178 WTEECQEYSKDTLGRNIAC 196
>gi|28559029 interleukin 5 receptor, alpha isoform 2 precursor [Homo
sapiens]
Length = 333
Score = 30.8 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 15 LQAAPGRP-----RLAPPQNVT------LLSQNFSVYLTWLPGLGNPQDVTYFVAYQSSP 63
L A PG P L N T L S S++ TWL G P+D YF+ Y+
Sbjct: 118 LHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTDAPEDTQYFLYYRYGS 177
Query: 64 TRRRWREVEECAGTKELLC 82
+E + + + C
Sbjct: 178 WTEECQEYSKDTLGRNIAC 196
>gi|14550407 complement component 2 isoform 1 preproprotein [Homo
sapiens]
Length = 752
Score = 30.4 bits (67), Expect = 1.5
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 8 GPL--LLCLLQAAPGRPRLAP--PQNVTLLSQNFSVYLTWLPG 46
GPL L CLL PG AP PQNV + F++ W PG
Sbjct: 2 GPLMVLFCLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPG 44
>gi|104487002 protein tyrosine phosphatase, receptor type, D isoform
5 precursor [Homo sapiens]
Length = 1502
Score = 30.0 bits (66), Expect = 1.9
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 26 PPQNVTLLSQNFSVYLTWLPGLGNPQDVTYF-VAYQSSPTRRRWREVEECAGTKELLCSM 84
P V S S+ LTW GNP+ V+Y+ + ++ + ++E++ A T+ + +
Sbjct: 323 PGTPVVTESTATSITLTW--DSGNPEPVSYYIIQHKPKNSEELYKEIDGVATTRYSVAGL 380
Query: 85 MCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQTEEILSANAT 144
Y+ ++ RV V+ + P P+ P VLTQT E ++A
Sbjct: 381 ------SPYSDYEFRVVAVNNIGRGP--------------PSEP--VLTQTSEQAPSSAP 418
Query: 145 YQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
+ M L + WKE P P+GQ
Sbjct: 419 RDVQARM--LSSTTILVQWKE--------PEEPNGQ 444
>gi|4506309 protein tyrosine phosphatase, receptor type, D isoform 1
precursor [Homo sapiens]
Length = 1912
Score = 30.0 bits (66), Expect = 1.9
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 26 PPQNVTLLSQNFSVYLTWLPGLGNPQDVTYF-VAYQSSPTRRRWREVEECAGTKELLCSM 84
P V S S+ LTW GNP+ V+Y+ + ++ + ++E++ A T+ + +
Sbjct: 326 PGTPVVTESTATSITLTW--DSGNPEPVSYYIIQHKPKNSEELYKEIDGVATTRYSVAGL 383
Query: 85 MCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQTEEILSANAT 144
Y+ ++ RV V+ + P P+ P VLTQT E ++A
Sbjct: 384 ------SPYSDYEFRVVAVNNIGRGP--------------PSEP--VLTQTSEQAPSSAP 421
Query: 145 YQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQ 180
+ M L + WKE P P+GQ
Sbjct: 422 RDVQARM--LSSTTILVQWKE--------PEEPNGQ 447
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,413,860
Number of Sequences: 37866
Number of extensions: 545511
Number of successful extensions: 1233
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1201
Number of HSP's gapped (non-prelim): 60
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.