Guide to the Human Genome
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Search of human proteins with 28372535

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28372535 t-complex-associated-testis-expressed 3 [Homo
sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens]    398   e-111
gi|239735600 Tctex1 domain containing 1 [Homo sapiens]                 62   4e-10
gi|61966721 Tctex1 domain containing 4 [Homo sapiens]                  61   7e-10
gi|229090471 Tctex1 domain containing 2 [Homo sapiens]                 60   2e-09
gi|169160677 PREDICTED: similar to Tctex1 domain containing 4 [H...    47   1e-05
gi|5730027 KH domain containing, RNA binding, signal transductio...    35   0.054
gi|5730085 dynein, light chain, Tctex-type 1 [Homo sapiens]            35   0.054
gi|5730087 dynein, light chain, Tctex-type 3 [Homo sapiens]            34   0.071
gi|239753813 PREDICTED: similar to dynein, light chain, Tctex-ty...    31   0.60 
gi|239748376 PREDICTED: hypothetical protein XP_002346645 [Homo ...    31   0.60 
gi|239742301 PREDICTED: hypothetical protein XP_002342481 [Homo ...    31   0.60 
gi|116089335 BR serine/threonine kinase 2 [Homo sapiens]               30   1.0  
gi|7705308 growth differentiation factor 2 [Homo sapiens]              30   1.3  
gi|146260271 hypothetical protein LOC129881 [Homo sapiens]             29   2.3  
gi|94536786 hypothetical protein LOC79091 [Homo sapiens]               29   2.3  
gi|31982906 cingulin-like 1 [Homo sapiens]                             29   3.0  
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]         29   3.0  
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        28   5.1  
gi|31543297 neutral sphingomyelinase (N-SMase) activation associ...    28   6.7  
gi|221625547 neutral sphingomyelinase (N-SMase) activation assoc...    28   6.7  
gi|150170670 piccolo isoform 2 [Homo sapiens]                          28   6.7  
gi|150378539 piccolo isoform 1 [Homo sapiens]                          28   6.7  
gi|146134388 YLP motif containing 1 [Homo sapiens]                     28   6.7  
gi|19923497 echinoderm microtubule associated protein like 4 iso...    27   8.7  

>gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens]
          Length = 198

 Score =  398 bits (1023), Expect = e-111
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 60
           MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE
Sbjct: 1   MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 60

Query: 61  PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK 120
           PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK
Sbjct: 61  PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK 120

Query: 121 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 180
           VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK
Sbjct: 121 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 180

Query: 181 HEAESYVALVLVFALYYE 198
           HEAESYVALVLVFALYYE
Sbjct: 181 HEAESYVALVLVFALYYE 198


>gi|239735600 Tctex1 domain containing 1 [Homo sapiens]
          Length = 179

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 8/165 (4%)

Query: 34  SMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKFANSYRMEPLK 93
           S+   E + + +  R+++S+  V Y+E P      DI +        ++  N+Y++ P K
Sbjct: 23  SLSNHEFWRKEIHGRIKDSMSTVSYMEEPSQRD--DISR------LTVQMENTYQLGPPK 74

Query: 94  KFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLF 153
            F   +V   ++ ++T  L+  +Y+ ++   ++  +++ I   VK+    RYK I+ V  
Sbjct: 75  HFPVVTVNHILKDVVTSYLQVEEYEPELCRQMTKTISEVIKAQVKDLMIPRYKLIVIVHI 134

Query: 154 IQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE 198
            Q   Q+I I SR +WD   D++ +      S  AL  V+A+Y E
Sbjct: 135 GQLNRQSILIGSRCLWDPKSDTFSSYVFRNSSLFALANVYAVYLE 179


>gi|61966721 Tctex1 domain containing 4 [Homo sapiens]
          Length = 221

 Score = 60.8 bits (146), Expect = 7e-10
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 84  ANSYRMEPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFG 141
           A SYR EP+  ++++A   +  ++  L   L D  Y     + L  EL +++ + ++E  
Sbjct: 105 APSYRTEPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELS 164

Query: 142 YHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE 198
             RYK +  V+   + GQ +++ SR +WD+A D   +  +   S  A+  V  LY E
Sbjct: 165 PPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 221


>gi|229090471 Tctex1 domain containing 2 [Homo sapiens]
          Length = 142

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 2/115 (1%)

Query: 85  NSYRMEPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGY 142
           N+Y + P+  ++F+   V+  +  +L E L + +Y  +    L+  L++ I   +KE G+
Sbjct: 27  NTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGF 86

Query: 143 HRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYY 197
            RYK +++V+  ++ G+ + +ASR  WD   D++       +S   +V  F  +Y
Sbjct: 87  DRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFGCFY 141


>gi|169160677 PREDICTED: similar to Tctex1 domain containing 4 [Homo
           sapiens]
          Length = 127

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/76 (28%), Positives = 40/76 (52%)

Query: 123 SHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHE 182
           + L  EL +++ + ++E    RYK +  V+   + GQ +++ SR +WD+A D   +  + 
Sbjct: 52  ARLVRELCEQVHVRLRELSPPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYT 111

Query: 183 AESYVALVLVFALYYE 198
             S  A+  V  LY E
Sbjct: 112 NTSLFAVATVHGLYCE 127


>gi|5730027 KH domain containing, RNA binding, signal transduction
           associated 1 [Homo sapiens]
          Length = 443

 Score = 34.7 bits (78), Expect = 0.054
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 27/154 (17%)

Query: 18  QTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSA 77
           QTP + P  P + R      +         R   +      + P      A +G    + 
Sbjct: 32  QTPSRQPPLPHRSRGGGGGSRGG------ARASPATQPPPLLPPSATGPDATVGGPAPTP 85

Query: 78  LAKLKFANSYRMEPLKKF------QAHSVE---TKVQQILTESLK-----DVKYDDK--- 120
           L       S +MEP  K+      +  S++   T   Q+LT  ++     D K DD+   
Sbjct: 86  LLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENY 145

Query: 121 --VFSHLSLELADRILLAVKEFGYHRYKFIIKVL 152
             +FSH +++L +R+L+ VK+  Y ++ F+ K+L
Sbjct: 146 LDLFSHKNMKLKERVLIPVKQ--YPKFNFVGKIL 177


>gi|5730085 dynein, light chain, Tctex-type 1 [Homo sapiens]
          Length = 113

 Score = 34.7 bits (78), Expect = 0.054
 Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 95  FQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLFI 154
           F    V   V++ +  ++    Y     +  +  + ++ L  + + G   +K+I+  + +
Sbjct: 12  FVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLG-KPFKYIVTCVIM 70

Query: 155 QKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195
           QK G  ++ AS   WD + D     + E ++   +V  F L
Sbjct: 71  QKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGL 111


>gi|5730087 dynein, light chain, Tctex-type 3 [Homo sapiens]
          Length = 116

 Score = 34.3 bits (77), Expect = 0.071
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 95  FQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLFI 154
           F A      V++ +   L    Y+    +  +  + ++ L  + + G   YK+I+    +
Sbjct: 13  FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLG-KAYKYIVTCAVV 71

Query: 155 QKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195
           QK+    + AS   WD   D     + E  +   +V VFA+
Sbjct: 72  QKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAI 112


>gi|239753813 PREDICTED: similar to dynein, light chain, Tctex-type
           1 [Homo sapiens]
          Length = 116

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195
           +K+I+  + IQK G    +AS   WD + D     + E ++   +V  F L
Sbjct: 64  FKYIVTCVIIQKNGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFGL 114


>gi|239748376 PREDICTED: hypothetical protein XP_002346645 [Homo
           sapiens]
          Length = 116

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195
           +K+I+  + IQK G    +AS   WD + D     + E ++   +V  F L
Sbjct: 64  FKYIVTCVIIQKNGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFGL 114


>gi|239742301 PREDICTED: hypothetical protein XP_002342481 [Homo
           sapiens]
          Length = 116

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195
           +K+I+  + IQK G    +AS   WD + D     + E ++   +V  F L
Sbjct: 64  FKYIVTCVIIQKNGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFGL 114


>gi|116089335 BR serine/threonine kinase 2 [Homo sapiens]
          Length = 668

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 17/136 (12%)

Query: 7   GVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDS 66
           G+ +SP+ +P  TP     +PR    P+      +T       +ES        PP   S
Sbjct: 419 GLSTSPLSSPRVTPHP---SPRGSPLPTPKGTPVHTP------KESPAGTPNPTPPSSPS 469

Query: 67  IADIGKEWKSALAKLKFANSYRMEP---LKKFQAHSVETKVQQILTESLKDVKYDDKVFS 123
           +   G  W++ L  +K  NS+   P    +K Q  + E ++  +  ES  ++       +
Sbjct: 470 VG--GVPWRARLNSIK--NSFLGSPRFHRRKLQVPTPE-EMSNLTPESSPELAKKSWFGN 524

Query: 124 HLSLELADRILLAVKE 139
            +SLE  ++I + +K+
Sbjct: 525 FISLEKEEQIFVVIKD 540


>gi|7705308 growth differentiation factor 2 [Homo sapiens]
          Length = 429

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 5/32 (15%)

Query: 155 QKTGQAINIASRWIWDIAWDSWVAAKHEAESY 186
           QKT   +N       DI WDSW+ A  E E+Y
Sbjct: 328 QKTSLRVNFE-----DIGWDSWIIAPKEYEAY 354


>gi|146260271 hypothetical protein LOC129881 [Homo sapiens]
          Length = 552

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 19/103 (18%)

Query: 37  EKEAYTQILRERLRESIHNV--QYVEPPFDD-------SIADIGKEWKSA--------LA 79
           EKEA T  L E+ RE IHN   + ++   D+        IA+   EW+           A
Sbjct: 313 EKEAETHRLMEKRRERIHNFLSELLKEKLDNEDMIIARDIAEAEAEWEKREREKDEKNKA 372

Query: 80  KLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDKVF 122
           +LK    YR   +K  +    + K++    E L  V   D++F
Sbjct: 373 ELKTIAEYRAIVMKNKEEEERQRKIE--AKEQLLAVMKADQIF 413


>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
          Length = 404

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 13  IQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGK 72
           ++ P       P  P +++   M   +    +L E  + S H++  +E      + D+GK
Sbjct: 125 VRRPRAASDSNPAGPLRDKVHPMILAQEEDDVLGEEAQGSPHDIIRIEHTMATPLEDVGK 184

Query: 73  E-WKSAL 78
           + W+ AL
Sbjct: 185 QVWRGAL 191


>gi|31982906 cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 75   KSALAKLKFANSYRM--EPLKKFQAHSVETKVQ-QILTESLKDVKYDDKVFSHL 125
            KS L  +K  +  R+  E L+ +Q    E   + Q+L ++LKD++Y+ +  SHL
Sbjct: 1002 KSRLTAMKMQDEMRLMEEELRDYQRAQDEALTKRQLLEQTLKDLEYELEAKSHL 1055


>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
          Length = 3639

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 11/59 (18%)

Query: 77   ALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILL 135
            AL ++     Y++     F AH V  +VQQ+           +K  +HL  E A R LL
Sbjct: 2912 ALTRVVLGTGYKLVQAGHFAAHEVAARVQQL-----------EKAMAHLRAEAARRRLL 2959


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2   EKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKE 39
           + RG GV SSP++ P  +P   PV   + RR +  E E
Sbjct: 424 QSRGMGVPSSPVRAPPDSP-TTPVRSLRYRRVNSPESE 460


>gi|31543297 neutral sphingomyelinase (N-SMase) activation
           associated factor isoform 1 [Homo sapiens]
          Length = 917

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%)

Query: 18  QTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSA 77
           QTP+Q  VTP   R    F+  + T         S +N    + P ++S  D+ +E K+ 
Sbjct: 562 QTPKQLFVTPHPRRITPKFKSLSQT---------SSYNASMADSPGEESFEDLTEESKTL 612

Query: 78  ----LAKLKFANSYRM 89
               + KL+    Y++
Sbjct: 613 AWNNITKLQLHEHYKI 628


>gi|221625547 neutral sphingomyelinase (N-SMase) activation
           associated factor isoform 2 [Homo sapiens]
          Length = 948

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%)

Query: 18  QTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSA 77
           QTP+Q  VTP   R    F+  + T         S +N    + P ++S  D+ +E K+ 
Sbjct: 593 QTPKQLFVTPHPRRITPKFKSLSQT---------SSYNASMADSPGEESFEDLTEESKTL 643

Query: 78  ----LAKLKFANSYRM 89
               + KL+    Y++
Sbjct: 644 AWNNITKLQLHEHYKI 659


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 13/123 (10%)

Query: 7    GVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQ---ILRERLRESIHNVQYVEPPF 63
            G K+SP+  P ++  Q    P + +     E+E  T+   ++ E+++E++ +++ + P  
Sbjct: 1131 GPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETL-SMEKIPP-- 1187

Query: 64   DDSIADIGKEWKSALAKLKFANSYRMEPL---KKF--QAHSVETKVQQILTESLKDVKYD 118
               +    K+ +S L K K +     +PL   KK   +   + ++ ++ L E  K    D
Sbjct: 1188 --MVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPED 1245

Query: 119  DKV 121
             K+
Sbjct: 1246 KKL 1248


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 13/123 (10%)

Query: 7    GVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQ---ILRERLRESIHNVQYVEPPF 63
            G K+SP+  P ++  Q    P + +     E+E  T+   ++ E+++E++ +++ + P  
Sbjct: 1131 GPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETL-SMEKIPP-- 1187

Query: 64   DDSIADIGKEWKSALAKLKFANSYRMEPL---KKF--QAHSVETKVQQILTESLKDVKYD 118
               +    K+ +S L K K +     +PL   KK   +   + ++ ++ L E  K    D
Sbjct: 1188 --MVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPED 1245

Query: 119  DKV 121
             K+
Sbjct: 1246 KKL 1248


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 37  EKEAYTQILRERLRE-SIHNVQYVEPPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKF 95
           +++ +  + +E  RE  +   Q    P  D + +  K+WK+    +K   SY  E +  F
Sbjct: 444 QQQQFQHLYQEWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKVNSF 503

Query: 96  Q 96
           Q
Sbjct: 504 Q 504


>gi|19923497 echinoderm microtubule associated protein like 4
           isoform a [Homo sapiens]
          Length = 981

 Score = 27.3 bits (59), Expect = 8.7
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 10  SSPIQTPNQTPQQAPVTPRKE-RRPSMFEK 38
           S P+Q   QTP+    TP K  +RPS  EK
Sbjct: 151 SQPLQIHRQTPESKNATPTKSIKRPSPAEK 180


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,233,387
Number of Sequences: 37866
Number of extensions: 291480
Number of successful extensions: 1328
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1309
Number of HSP's gapped (non-prelim): 29
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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