BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens] (198 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens] 398 e-111 gi|239735600 Tctex1 domain containing 1 [Homo sapiens] 62 4e-10 gi|61966721 Tctex1 domain containing 4 [Homo sapiens] 61 7e-10 gi|229090471 Tctex1 domain containing 2 [Homo sapiens] 60 2e-09 gi|169160677 PREDICTED: similar to Tctex1 domain containing 4 [H... 47 1e-05 gi|5730027 KH domain containing, RNA binding, signal transductio... 35 0.054 gi|5730085 dynein, light chain, Tctex-type 1 [Homo sapiens] 35 0.054 gi|5730087 dynein, light chain, Tctex-type 3 [Homo sapiens] 34 0.071 gi|239753813 PREDICTED: similar to dynein, light chain, Tctex-ty... 31 0.60 gi|239748376 PREDICTED: hypothetical protein XP_002346645 [Homo ... 31 0.60 gi|239742301 PREDICTED: hypothetical protein XP_002342481 [Homo ... 31 0.60 gi|116089335 BR serine/threonine kinase 2 [Homo sapiens] 30 1.0 gi|7705308 growth differentiation factor 2 [Homo sapiens] 30 1.3 gi|146260271 hypothetical protein LOC129881 [Homo sapiens] 29 2.3 gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 29 2.3 gi|31982906 cingulin-like 1 [Homo sapiens] 29 3.0 gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens] 29 3.0 gi|58761548 tau tubulin kinase 1 [Homo sapiens] 28 5.1 gi|31543297 neutral sphingomyelinase (N-SMase) activation associ... 28 6.7 gi|221625547 neutral sphingomyelinase (N-SMase) activation assoc... 28 6.7 gi|150170670 piccolo isoform 2 [Homo sapiens] 28 6.7 gi|150378539 piccolo isoform 1 [Homo sapiens] 28 6.7 gi|146134388 YLP motif containing 1 [Homo sapiens] 28 6.7 gi|19923497 echinoderm microtubule associated protein like 4 iso... 27 8.7 >gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens] Length = 198 Score = 398 bits (1023), Expect = e-111 Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 1 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 60 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE Sbjct: 1 MEKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVE 60 Query: 61 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK 120 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK Sbjct: 61 PPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDK 120 Query: 121 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 180 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK Sbjct: 121 VFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAK 180 Query: 181 HEAESYVALVLVFALYYE 198 HEAESYVALVLVFALYYE Sbjct: 181 HEAESYVALVLVFALYYE 198 >gi|239735600 Tctex1 domain containing 1 [Homo sapiens] Length = 179 Score = 61.6 bits (148), Expect = 4e-10 Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 8/165 (4%) Query: 34 SMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSALAKLKFANSYRMEPLK 93 S+ E + + + R+++S+ V Y+E P DI + ++ N+Y++ P K Sbjct: 23 SLSNHEFWRKEIHGRIKDSMSTVSYMEEPSQRD--DISR------LTVQMENTYQLGPPK 74 Query: 94 KFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLF 153 F +V ++ ++T L+ +Y+ ++ ++ +++ I VK+ RYK I+ V Sbjct: 75 HFPVVTVNHILKDVVTSYLQVEEYEPELCRQMTKTISEVIKAQVKDLMIPRYKLIVIVHI 134 Query: 154 IQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE 198 Q Q+I I SR +WD D++ + S AL V+A+Y E Sbjct: 135 GQLNRQSILIGSRCLWDPKSDTFSSYVFRNSSLFALANVYAVYLE 179 >gi|61966721 Tctex1 domain containing 4 [Homo sapiens] Length = 221 Score = 60.8 bits (146), Expect = 7e-10 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 2/117 (1%) Query: 84 ANSYRMEPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFG 141 A SYR EP+ ++++A + ++ L L D Y + L EL +++ + ++E Sbjct: 105 APSYRTEPVPGERWEAARAQRALEAALAAGLHDACYSSDEAARLVRELCEQVHVRLRELS 164 Query: 142 YHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYYE 198 RYK + V+ + GQ +++ SR +WD+A D + + S A+ V LY E Sbjct: 165 PPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATVHGLYCE 221 >gi|229090471 Tctex1 domain containing 2 [Homo sapiens] Length = 142 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 2/115 (1%) Query: 85 NSYRMEPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGY 142 N+Y + P+ ++F+ V+ + +L E L + +Y + L+ L++ I +KE G+ Sbjct: 27 NTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGF 86 Query: 143 HRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYY 197 RYK +++V+ ++ G+ + +ASR WD D++ +S +V F +Y Sbjct: 87 DRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFGCFY 141 >gi|169160677 PREDICTED: similar to Tctex1 domain containing 4 [Homo sapiens] Length = 127 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/76 (28%), Positives = 40/76 (52%) Query: 123 SHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHE 182 + L EL +++ + ++E RYK + V+ + GQ +++ SR +WD+A D + + Sbjct: 52 ARLVRELCEQVHVRLRELSPPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYT 111 Query: 183 AESYVALVLVFALYYE 198 S A+ V LY E Sbjct: 112 NTSLFAVATVHGLYCE 127 >gi|5730027 KH domain containing, RNA binding, signal transduction associated 1 [Homo sapiens] Length = 443 Score = 34.7 bits (78), Expect = 0.054 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 27/154 (17%) Query: 18 QTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSA 77 QTP + P P + R + R + + P A +G + Sbjct: 32 QTPSRQPPLPHRSRGGGGGSRGG------ARASPATQPPPLLPPSATGPDATVGGPAPTP 85 Query: 78 LAKLKFANSYRMEPLKKF------QAHSVE---TKVQQILTESLK-----DVKYDDK--- 120 L S +MEP K+ + S++ T Q+LT ++ D K DD+ Sbjct: 86 LLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENY 145 Query: 121 --VFSHLSLELADRILLAVKEFGYHRYKFIIKVL 152 +FSH +++L +R+L+ VK+ Y ++ F+ K+L Sbjct: 146 LDLFSHKNMKLKERVLIPVKQ--YPKFNFVGKIL 177 >gi|5730085 dynein, light chain, Tctex-type 1 [Homo sapiens] Length = 113 Score = 34.7 bits (78), Expect = 0.054 Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 1/101 (0%) Query: 95 FQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLFI 154 F V V++ + ++ Y + + + ++ L + + G +K+I+ + + Sbjct: 12 FVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLG-KPFKYIVTCVIM 70 Query: 155 QKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195 QK G ++ AS WD + D + E ++ +V F L Sbjct: 71 QKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGL 111 >gi|5730087 dynein, light chain, Tctex-type 3 [Homo sapiens] Length = 116 Score = 34.3 bits (77), Expect = 0.071 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Query: 95 FQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLFI 154 F A V++ + L Y+ + + + ++ L + + G YK+I+ + Sbjct: 13 FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLG-KAYKYIVTCAVV 71 Query: 155 QKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195 QK+ + AS WD D + E + +V VFA+ Sbjct: 72 QKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAI 112 >gi|239753813 PREDICTED: similar to dynein, light chain, Tctex-type 1 [Homo sapiens] Length = 116 Score = 31.2 bits (69), Expect = 0.60 Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195 +K+I+ + IQK G +AS WD + D + E ++ +V F L Sbjct: 64 FKYIVTCVIIQKNGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFGL 114 >gi|239748376 PREDICTED: hypothetical protein XP_002346645 [Homo sapiens] Length = 116 Score = 31.2 bits (69), Expect = 0.60 Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195 +K+I+ + IQK G +AS WD + D + E ++ +V F L Sbjct: 64 FKYIVTCVIIQKNGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFGL 114 >gi|239742301 PREDICTED: hypothetical protein XP_002342481 [Homo sapiens] Length = 116 Score = 31.2 bits (69), Expect = 0.60 Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 145 YKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFAL 195 +K+I+ + IQK G +AS WD + D + E ++ +V F L Sbjct: 64 FKYIVTCVIIQKNGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFGL 114 >gi|116089335 BR serine/threonine kinase 2 [Homo sapiens] Length = 668 Score = 30.4 bits (67), Expect = 1.0 Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 17/136 (12%) Query: 7 GVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDS 66 G+ +SP+ +P TP +PR P+ +T +ES PP S Sbjct: 419 GLSTSPLSSPRVTPHP---SPRGSPLPTPKGTPVHTP------KESPAGTPNPTPPSSPS 469 Query: 67 IADIGKEWKSALAKLKFANSYRMEP---LKKFQAHSVETKVQQILTESLKDVKYDDKVFS 123 + G W++ L +K NS+ P +K Q + E ++ + ES ++ + Sbjct: 470 VG--GVPWRARLNSIK--NSFLGSPRFHRRKLQVPTPE-EMSNLTPESSPELAKKSWFGN 524 Query: 124 HLSLELADRILLAVKE 139 +SLE ++I + +K+ Sbjct: 525 FISLEKEEQIFVVIKD 540 >gi|7705308 growth differentiation factor 2 [Homo sapiens] Length = 429 Score = 30.0 bits (66), Expect = 1.3 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 5/32 (15%) Query: 155 QKTGQAINIASRWIWDIAWDSWVAAKHEAESY 186 QKT +N DI WDSW+ A E E+Y Sbjct: 328 QKTSLRVNFE-----DIGWDSWIIAPKEYEAY 354 >gi|146260271 hypothetical protein LOC129881 [Homo sapiens] Length = 552 Score = 29.3 bits (64), Expect = 2.3 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 19/103 (18%) Query: 37 EKEAYTQILRERLRESIHNV--QYVEPPFDD-------SIADIGKEWKSA--------LA 79 EKEA T L E+ RE IHN + ++ D+ IA+ EW+ A Sbjct: 313 EKEAETHRLMEKRRERIHNFLSELLKEKLDNEDMIIARDIAEAEAEWEKREREKDEKNKA 372 Query: 80 KLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDKVF 122 +LK YR +K + + K++ E L V D++F Sbjct: 373 ELKTIAEYRAIVMKNKEEEERQRKIE--AKEQLLAVMKADQIF 413 >gi|94536786 hypothetical protein LOC79091 [Homo sapiens] Length = 404 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 13 IQTPNQTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGK 72 ++ P P P +++ M + +L E + S H++ +E + D+GK Sbjct: 125 VRRPRAASDSNPAGPLRDKVHPMILAQEEDDVLGEEAQGSPHDIIRIEHTMATPLEDVGK 184 Query: 73 E-WKSAL 78 + W+ AL Sbjct: 185 QVWRGAL 191 >gi|31982906 cingulin-like 1 [Homo sapiens] Length = 1302 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 75 KSALAKLKFANSYRM--EPLKKFQAHSVETKVQ-QILTESLKDVKYDDKVFSHL 125 KS L +K + R+ E L+ +Q E + Q+L ++LKD++Y+ + SHL Sbjct: 1002 KSRLTAMKMQDEMRLMEEELRDYQRAQDEALTKRQLLEQTLKDLEYELEAKSHL 1055 >gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens] Length = 3639 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 11/59 (18%) Query: 77 ALAKLKFANSYRMEPLKKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILL 135 AL ++ Y++ F AH V +VQQ+ +K +HL E A R LL Sbjct: 2912 ALTRVVLGTGYKLVQAGHFAAHEVAARVQQL-----------EKAMAHLRAEAARRRLL 2959 >gi|58761548 tau tubulin kinase 1 [Homo sapiens] Length = 1321 Score = 28.1 bits (61), Expect = 5.1 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 2 EKRGRGVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKE 39 + RG GV SSP++ P +P PV + RR + E E Sbjct: 424 QSRGMGVPSSPVRAPPDSP-TTPVRSLRYRRVNSPESE 460 >gi|31543297 neutral sphingomyelinase (N-SMase) activation associated factor isoform 1 [Homo sapiens] Length = 917 Score = 27.7 bits (60), Expect = 6.7 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Query: 18 QTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSA 77 QTP+Q VTP R F+ + T S +N + P ++S D+ +E K+ Sbjct: 562 QTPKQLFVTPHPRRITPKFKSLSQT---------SSYNASMADSPGEESFEDLTEESKTL 612 Query: 78 ----LAKLKFANSYRM 89 + KL+ Y++ Sbjct: 613 AWNNITKLQLHEHYKI 628 >gi|221625547 neutral sphingomyelinase (N-SMase) activation associated factor isoform 2 [Homo sapiens] Length = 948 Score = 27.7 bits (60), Expect = 6.7 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%) Query: 18 QTPQQAPVTPRKERRPSMFEKEAYTQILRERLRESIHNVQYVEPPFDDSIADIGKEWKSA 77 QTP+Q VTP R F+ + T S +N + P ++S D+ +E K+ Sbjct: 593 QTPKQLFVTPHPRRITPKFKSLSQT---------SSYNASMADSPGEESFEDLTEESKTL 643 Query: 78 ----LAKLKFANSYRM 89 + KL+ Y++ Sbjct: 644 AWNNITKLQLHEHYKI 659 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 27.7 bits (60), Expect = 6.7 Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 13/123 (10%) Query: 7 GVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQ---ILRERLRESIHNVQYVEPPF 63 G K+SP+ P ++ Q P + + E+E T+ ++ E+++E++ +++ + P Sbjct: 1131 GPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETL-SMEKIPP-- 1187 Query: 64 DDSIADIGKEWKSALAKLKFANSYRMEPL---KKF--QAHSVETKVQQILTESLKDVKYD 118 + K+ +S L K K + +PL KK + + ++ ++ L E K D Sbjct: 1188 --MVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPED 1245 Query: 119 DKV 121 K+ Sbjct: 1246 KKL 1248 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 27.7 bits (60), Expect = 6.7 Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 13/123 (10%) Query: 7 GVKSSPIQTPNQTPQQAPVTPRKERRPSMFEKEAYTQ---ILRERLRESIHNVQYVEPPF 63 G K+SP+ P ++ Q P + + E+E T+ ++ E+++E++ +++ + P Sbjct: 1131 GPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETL-SMEKIPP-- 1187 Query: 64 DDSIADIGKEWKSALAKLKFANSYRMEPL---KKF--QAHSVETKVQQILTESLKDVKYD 118 + K+ +S L K K + +PL KK + + ++ ++ L E K D Sbjct: 1188 --MVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPED 1245 Query: 119 DKV 121 K+ Sbjct: 1246 KKL 1248 >gi|146134388 YLP motif containing 1 [Homo sapiens] Length = 2146 Score = 27.7 bits (60), Expect = 6.7 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query: 37 EKEAYTQILRERLRE-SIHNVQYVEPPFDDSIADIGKEWKSALAKLKFANSYRMEPLKKF 95 +++ + + +E RE + Q P D + + K+WK+ +K SY E + F Sbjct: 444 QQQQFQHLYQEWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKVNSF 503 Query: 96 Q 96 Q Sbjct: 504 Q 504 >gi|19923497 echinoderm microtubule associated protein like 4 isoform a [Homo sapiens] Length = 981 Score = 27.3 bits (59), Expect = 8.7 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 10 SSPIQTPNQTPQQAPVTPRKE-RRPSMFEK 38 S P+Q QTP+ TP K +RPS EK Sbjct: 151 SQPLQIHRQTPESKNATPTKSIKRPSPAEK 180 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,233,387 Number of Sequences: 37866 Number of extensions: 291480 Number of successful extensions: 1328 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 1309 Number of HSP's gapped (non-prelim): 29 length of query: 198 length of database: 18,247,518 effective HSP length: 97 effective length of query: 101 effective length of database: 14,574,516 effective search space: 1472026116 effective search space used: 1472026116 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.