Guide to the Human Genome
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Name: ZNF619 Sequence: fasta or formatted (560aa) NCBI GI: 27734907
Description:

zinc finger protein 619 isoform 4

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [576aa] zinc finger protein 619 isoform 2
alt prot [567aa] zinc finger protein 619 isoform 3
alt prot [616aa] zinc finger protein 619 isoform 1
alt prot [532aa] zinc finger protein 619 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         21           1
 C cysteine            5.7         32           1
 D aspartate           2.7         15           1
 E glutamate           7.7         43           2
 F phenylalanine       4.3         24           2
 G glycine             7.0         39           2
 H histidine           6.4         36           1
 I isoleucine          4.5         25           2
 K lysine              8.2         46           2
 L leucine             7.1         40           3
 M methionine          0.5          3           1
 N asparagine          3.2         18           1
 P proline             6.6         37           2
 Q glutamine           5.9         33           1
 R arginine            4.8         27           2
 S serine              9.3         52           3
 T threonine           5.4         30           2
 V valine              3.4         19           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 619 isoform 4 
ZNF619                0.994   zinc finger protein 619 isoform 3 
ZNF619                0.852   zinc finger protein 619 isoform 5 
ZNF619                0.852   zinc finger protein 619 isoform 1 
ZNF619                0.852   zinc finger protein 619 isoform 2 
ZNF167                0.321   zinc finger protein 167 isoform 1 
ZNF621                0.319   zinc finger protein 621 
ZNF621                0.319   zinc finger protein 621 
ZNF23                 0.318   zinc finger protein 23 
ZNF852                0.318   PREDICTED: zinc finger protein 852 
ZNF852                0.316   PREDICTED: zinc finger protein 852 
ZNF852                0.316   PREDICTED: zinc finger protein 852 
ZNF420                0.311   zinc finger protein 420 
ZNF180                0.309   zinc finger protein 180 
ZNF16                 0.309   zinc finger protein 16 
ZNF16                 0.309   zinc finger protein 16 
ZNF383                0.309   zinc finger protein 383 
ZNF345                0.308   zinc finger protein 345 
LOC647678             0.308   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.308   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.308   PREDICTED: hypothetical protein XP_002343697 
ZNF135                0.306   zinc finger protein 135 
ZNF211                0.306   zinc finger protein 211 isoform 2 
ZNF211                0.306   zinc finger protein 211 isoform 1 
DKFZp686E2433         0.306   hypothetical protein LOC345462 
ZNF34                 0.306   zinc finger protein 34 
ZFP3                  0.306   zinc finger protein-3 
ZNF502                0.305   zinc finger protein 502 
ZNF502                0.305   zinc finger protein 502 
ZNF502                0.305   zinc finger protein 502 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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