BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|27734719 solute carrier family 19, member 2 [Homo sapiens] (497 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|27734719 solute carrier family 19, member 2 [Homo sapiens] 994 0.0 gi|13376856 solute carrier family 19, member 3 [Homo sapiens] 484 e-137 gi|34808710 solute carrier family 19 member 1 [Homo sapiens] 341 8e-94 gi|241982806 hypothetical protein LOC56918 isoform 2 [Homo sapiens] 48 2e-05 gi|241982804 hypothetical protein LOC56918 isoform 1 [Homo sapiens] 48 2e-05 gi|20127561 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1... 32 1.3 gi|209862760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ... 32 1.3 gi|157671931 solute carrier family 5 (sodium/glucose cotransport... 32 1.7 gi|8922116 hypothetical protein LOC11094 isoform a [Homo sapiens] 31 2.3 gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform... 30 3.9 gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform... 30 3.9 gi|31563526 solute carrier family 24 (sodium/potassium/calcium e... 30 3.9 gi|31542327 solute carrier family 22, member 16 [Homo sapiens] 30 3.9 gi|17318565 cyclin E2 [Homo sapiens] 30 6.6 gi|134152683 transmembrane protein 214 isoform 2 [Homo sapiens] 30 6.6 gi|134152721 transmembrane protein 214 isoform 1 [Homo sapiens] 30 6.6 >gi|27734719 solute carrier family 19, member 2 [Homo sapiens] Length = 497 Score = 994 bits (2571), Expect = 0.0 Identities = 497/497 (100%), Positives = 497/497 (100%) Query: 1 MDVPGPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASLRPSEPFLTPYLLGP 60 MDVPGPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASLRPSEPFLTPYLLGP Sbjct: 1 MDVPGPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASLRPSEPFLTPYLLGP 60 Query: 61 DKNLTEREVFNEIYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQG 120 DKNLTEREVFNEIYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQG Sbjct: 61 DKNLTEREVFNEIYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQG 120 Query: 121 LLAIQFLEFFYGIATATEIAYYSYIYSVVDLGMYQKVTSYCRSATLVGFTVGSVLGQILV 180 LLAIQFLEFFYGIATATEIAYYSYIYSVVDLGMYQKVTSYCRSATLVGFTVGSVLGQILV Sbjct: 121 LLAIQFLEFFYGIATATEIAYYSYIYSVVDLGMYQKVTSYCRSATLVGFTVGSVLGQILV 180 Query: 181 SVAGWSLFSLNVISLTCVSVAFAVAWFLPMPQKSLFFHHIPSTCQRVNGIKVQNGGIVTD 240 SVAGWSLFSLNVISLTCVSVAFAVAWFLPMPQKSLFFHHIPSTCQRVNGIKVQNGGIVTD Sbjct: 181 SVAGWSLFSLNVISLTCVSVAFAVAWFLPMPQKSLFFHHIPSTCQRVNGIKVQNGGIVTD 240 Query: 241 TPASNHLPGWEDIESKIPLNMEEPPVEEPEPKPDRLLVLKVLWNDFLMCYSSRPLLCWSV 300 TPASNHLPGWEDIESKIPLNMEEPPVEEPEPKPDRLLVLKVLWNDFLMCYSSRPLLCWSV Sbjct: 241 TPASNHLPGWEDIESKIPLNMEEPPVEEPEPKPDRLLVLKVLWNDFLMCYSSRPLLCWSV 300 Query: 301 WWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVSTLLGAVAVFAVGYIKISWST 360 WWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVSTLLGAVAVFAVGYIKISWST Sbjct: 301 WWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVSTLLGAVAVFAVGYIKISWST 360 Query: 361 WGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYMLLITIATFQIAANLSMERY 420 WGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYMLLITIATFQIAANLSMERY Sbjct: 361 WGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYMLLITIATFQIAANLSMERY 420 Query: 421 ALVFGVNTFIALALQTLLTLIVVDASGLGLEITTQFLIYASYFALIAVVFLASGAVSVMK 480 ALVFGVNTFIALALQTLLTLIVVDASGLGLEITTQFLIYASYFALIAVVFLASGAVSVMK Sbjct: 421 ALVFGVNTFIALALQTLLTLIVVDASGLGLEITTQFLIYASYFALIAVVFLASGAVSVMK 480 Query: 481 KCRKLEDPQSSSQVTTS 497 KCRKLEDPQSSSQVTTS Sbjct: 481 KCRKLEDPQSSSQVTTS 497 >gi|13376856 solute carrier family 19, member 3 [Homo sapiens] Length = 496 Score = 484 bits (1246), Expect = e-137 Identities = 237/447 (53%), Positives = 314/447 (70%), Gaps = 9/447 (2%) Query: 30 WFLPTALLCAYGFFASLRPSEPFLTPYLLGPDKNLTEREVFNEIYPVWTYSYLVLLFPVF 89 W PT +LC +GFF+ +RPSEPFL PYL GPDKNLT E+ NEI+PVWTYSYLVLL PVF Sbjct: 12 WIYPTVILCLFGFFSMMRPSEPFLIPYLSGPDKNLTSAEITNEIFPVWTYSYLVLLLPVF 71 Query: 90 LATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLLAIQFLEFFYGIATATEIAYYSYIYSVV 149 + TDY+RYKPV++LQG+S I+TW +LL+ QG+ +Q +EFFYG+ TA E+AYY+YIYSVV Sbjct: 72 VLTDYVRYKPVIILQGISFIITWLLLLFGQGVKTMQVVEFFYGMVTAAEVAYYAYIYSVV 131 Query: 150 DLGMYQKVTSYCRSATLVGFTVGSVLGQILVSVAGWSLFSLNVISLTCVSVAFAVAWFLP 209 YQ+V+ YCRS TL +T GSVL Q+LVS+A S F LNVISL VSVAF + FLP Sbjct: 132 SPEHYQRVSGYCRSVTLAAYTAGSVLAQLLVSLANMSYFYLNVISLASVSVAFLFSLFLP 191 Query: 210 MPQKSLFFHHIPSTCQRVNGIKVQNGGIVTDTPASNHLPGWEDIESKIPL-----NMEEP 264 MP+KS+FFH PS + K + V + PG E+ + + + + Sbjct: 192 MPKKSMFFHAKPSREIK----KSSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGKLNKG 247 Query: 265 PVEEPEPKPDRLLVLKVLWNDFLMCYSSRPLLCWSVWWALSTCGYFQVVNYTQGLWEKVM 324 + +P + V + D CYSS+ L WS+WWA +T G+ QV+NY Q LW+ Sbjct: 248 QLNSLKPSNVTVDVFVQWFQDLKECYSSKRLFYWSLWWAFATAGFNQVLNYVQILWDYKA 307 Query: 325 PSRYAAIYNGGVEAVSTLLGAVAVFAVGYIKISWSTWGEMTLSLFSLLIAAAVYIMDTVG 384 PS+ ++IYNG VEA++T GAVA FAVGY+K++W GE+ L +FS++ A ++++M Sbjct: 308 PSQDSSIYNGAVEAIATFGGAVAAFAVGYVKVNWDLLGELALVVFSVVNAGSLFLMHYTA 367 Query: 385 NIWVCYASYVVFRIIYMLLITIATFQIAANLSMERYALVFGVNTFIALALQTLLTLIVVD 444 NIW CYA Y++F+ YMLLITIA FQIA NL++ERYALVFG+NTFIAL +QT++T+IVVD Sbjct: 368 NIWACYAGYLIFKSSYMLLITIAVFQIAVNLNVERYALVFGINTFIALVIQTIMTVIVVD 427 Query: 445 ASGLGLEITTQFLIYASYFALIAVVFL 471 GL L ++ QFL+Y SYFA+IA +FL Sbjct: 428 QRGLNLPVSIQFLVYGSYFAVIAGIFL 454 >gi|34808710 solute carrier family 19 member 1 [Homo sapiens] Length = 591 Score = 341 bits (875), Expect = 8e-94 Identities = 185/473 (39%), Positives = 265/473 (56%), Gaps = 45/473 (9%) Query: 30 WFLPTALLCAYGFFASLRPSEPFLTPYLLGPDKNLTEREVFNEIYPVWTYSYLVLLFPVF 89 W LC YGF A +RP E F+TPYLLGPDKN T +V NEI PV +YSYL +L PVF Sbjct: 25 WRHLVCYLCFYGFMAQIRPGESFITPYLLGPDKNFTREQVTNEITPVLSYSYLAVLVPVF 84 Query: 90 LATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLLAIQFLEFFYGIATATEIAYYSYIYSVV 149 L TDYLRY PV+LLQGLS + W +LL + +Q +E FY + A IAY SYI+S+V Sbjct: 85 LLTDYLRYTPVLLLQGLSFVSVWLLLLLGHSVAHMQLMELFYSVTMAARIAYSSYIFSLV 144 Query: 150 DLGMYQKVTSYCRSATLVGFTVGSVLGQILVSVAGWSLFSLNVISLTCVSVAFAVAWFLP 209 YQ+V Y R+A L+G SVLGQ+LV+V S +LN ISL ++ + +A FL Sbjct: 145 RPARYQRVAGYSRAAVLLGVFTSSVLGQLLVTVGRVSFSTLNYISLAFLTFSVVLALFLK 204 Query: 210 MPQKSLFFHHIPSTCQRVNGIKVQNGGIVTDTPASNHLPGWEDIESKIPLNMEEPPVEEP 269 P++SLFF+ D + + E P Sbjct: 205 RPKRSLFFN--------------------------------RDDRGRCETSASELERMNP 232 Query: 270 EPKPDRLLVLKVLWNDFLMCYSSR---------PLLCWSVWWALSTCGYFQVVNYTQGLW 320 P L+V D ++ R L WS+WW ++ GY+ VV Y LW Sbjct: 233 GPGGKLGHALRVACGDSVLARMLRELGDSLRRPQLRLWSLWWVFNSAGYYLVVYYVHILW 292 Query: 321 EKVMPSRYAA-IYNGGVEAVSTLLGAVAVFAVGYIKISWSTWGEMTLSLFSLLIAAAVYI 379 +V P+ +A +YNG +A STLLGA+ FA G++KI W+ W ++ ++ + A V++ Sbjct: 293 NEVDPTTNSARVYNGAADAASTLLGAITSFAAGFVKIRWARWSKLLIAGVTATQAGLVFL 352 Query: 380 MDTV---GNIWVCYASYVVFRIIYMLLITIATFQIAANLSMERYALVFGVNTFIALALQT 436 + +IW+CYA++V+FR Y L+ IATFQIA++LS E ALVFGVNTF A ++T Sbjct: 353 LAHTRHPSSIWLCYAAFVLFRGSYQFLVPIATFQIASSLSKELCALVFGVNTFFATIVKT 412 Query: 437 LLTLIVVDASGLGLEITTQFLIYASYFALIAVVFLASGAVSVMKKCRKLEDPQ 489 ++T IV D GLGL + QF +Y+ YF ++++++ + ++ C++ P+ Sbjct: 413 IITFIVSDVRGLGLPVRKQFQLYSVYFLILSIIYFLGAMLDGLRHCQRGHHPR 465 >gi|241982806 hypothetical protein LOC56918 isoform 2 [Homo sapiens] Length = 96 Score = 47.8 bits (112), Expect = 2e-05 Identities = 22/39 (56%), Positives = 28/39 (71%) Query: 417 MERYALVFGVNTFIALALQTLLTLIVVDASGLGLEITTQ 455 ME YAL FG+N FIAL +Q ++T+ VVD GLGL + Q Sbjct: 1 MEDYALTFGINPFIALMIQPIVTMTVVDNQGLGLPVDIQ 39 >gi|241982804 hypothetical protein LOC56918 isoform 1 [Homo sapiens] Length = 150 Score = 47.8 bits (112), Expect = 2e-05 Identities = 22/39 (56%), Positives = 28/39 (71%) Query: 417 MERYALVFGVNTFIALALQTLLTLIVVDASGLGLEITTQ 455 ME YAL FG+N FIAL +Q ++T+ VVD GLGL + Q Sbjct: 1 MEDYALTFGINPFIALMIQPIVTMTVVDNQGLGLPVDIQ 39 >gi|20127561 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa isoform 1 [Homo sapiens] Length = 163 Score = 32.0 bits (71), Expect = 1.3 Identities = 39/108 (36%), Positives = 48/108 (44%), Gaps = 17/108 (15%) Query: 5 GPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASLRPSEPFLTPYLLGP---D 61 G +RR AAAAT L ARVR E F T + A A RP EP TP+ P D Sbjct: 7 GLSARRLLAAAATRGLPAARVRWESSFSRTVV--APSAVAGKRPPEP-TTPWQEDPEPED 63 Query: 62 KNLTEREVFNEIY------PVWTYSYLVLLFPV----FLATDYLRYKP 99 +NL E+ + Y VW LV F V L + ++ Y P Sbjct: 64 ENLYEKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLP 110 >gi|209862760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa isoform 2 [Homo sapiens] Length = 153 Score = 32.0 bits (71), Expect = 1.3 Identities = 39/108 (36%), Positives = 48/108 (44%), Gaps = 17/108 (15%) Query: 5 GPVSRRAAAAAATVLLRTARVRRECWFLPTALLCAYGFFASLRPSEPFLTPYLLGP---D 61 G +RR AAAAT L ARVR E F T + A A RP EP TP+ P D Sbjct: 7 GLSARRLLAAAATRGLPAARVRWESSFSRTVV--APSAVAGKRPPEP-TTPWQEDPEPED 63 Query: 62 KNLTEREVFNEIY------PVWTYSYLVLLFPV----FLATDYLRYKP 99 +NL E+ + Y VW LV F V L + ++ Y P Sbjct: 64 ENLYEKNPDSHGYDKDPVLDVWNMR-LVFFFGVSIILVLGSTFVAYLP 110 >gi|157671931 solute carrier family 5 (sodium/glucose cotransporter), member 12 [Homo sapiens] Length = 618 Score = 31.6 bits (70), Expect = 1.7 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 13/117 (11%) Query: 360 TWGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYMLLITIAT-------FQIA 412 ++G + LSL + ++A V ++ T ++ AS++VF I Y+ +I + + ++ Sbjct: 49 SFGPVGLSLTASFMSA-VTVLGTPSEVYRFGASFLVFFIAYLFVILLTSELFLPVFYRSG 107 Query: 413 ANLSMERYALVFG-----VNTFIALALQTLLTLIVVDASGLGLEITTQFLIYASYFA 464 + E L F T I + L T +VV A L L T F ++ S FA Sbjct: 108 ITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWGSVFA 164 >gi|8922116 hypothetical protein LOC11094 isoform a [Homo sapiens] Length = 172 Score = 31.2 bits (69), Expect = 2.3 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 23/138 (16%) Query: 77 WTYSYLVLLFPVFLAT--------DYLRYKPVVLLQGLSLIVTWFMLLYAQGLLAIQFLE 128 W Y +L L V A + + P+ + G+ +I+ F+LL + QF+E Sbjct: 25 WWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFILLLCEAPFCCQFIE 84 Query: 129 FFYGIATATEIAYYSYIYSVVDLGMYQKVTSYCRSAT---LVGFTVGSVLGQILVSVAGW 185 F +A V L +QK YC A ++ T+ ++LG + G Sbjct: 85 FANTVAE-----------KVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATG- 132 Query: 186 SLFSLNVISLTCVSVAFA 203 L+ L+ + ++++A Sbjct: 133 VLYGLSALGKKGDAISYA 150 >gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform a [Homo sapiens] Length = 2436 Score = 30.4 bits (67), Expect = 3.9 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 19/189 (10%) Query: 284 NDFLMCYSSRPLLCWSVWWALSTCGYFQ-VVNYTQGLWEKVMPSRYAAIYNGGVEAVSTL 342 +DFL LC + W S Q +V + ++VM + ++ Sbjct: 698 DDFLFVIEHMMPLCMVISWVYSVAMTIQHIVAEKEHRLKEVMKTM----------GLNNA 747 Query: 343 LGAVAVFAVGYIKISWSTWGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYML 402 + VA F G++++S S +L ++L V + V IW+ A Y V I++ Sbjct: 748 VHWVAWFITGFVQLSISV-----TALTAILKYGQVLMHSHVVIIWLFLAVYAVATIMFCF 802 Query: 403 LITI--ATFQIAANLSMERYALVFGVNTFIALALQTLLTLIVV-DASGLGLEITTQFLIY 459 L+++ + ++A+ Y L + ++A+ + I + L TT F + Sbjct: 803 LVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLG 862 Query: 460 ASYFALIAV 468 + YFAL V Sbjct: 863 SKYFALYEV 871 >gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform b [Homo sapiens] Length = 2466 Score = 30.4 bits (67), Expect = 3.9 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 19/189 (10%) Query: 284 NDFLMCYSSRPLLCWSVWWALSTCGYFQ-VVNYTQGLWEKVMPSRYAAIYNGGVEAVSTL 342 +DFL LC + W S Q +V + ++VM + ++ Sbjct: 728 DDFLFVIEHMMPLCMVISWVYSVAMTIQHIVAEKEHRLKEVMKTM----------GLNNA 777 Query: 343 LGAVAVFAVGYIKISWSTWGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYML 402 + VA F G++++S S +L ++L V + V IW+ A Y V I++ Sbjct: 778 VHWVAWFITGFVQLSISV-----TALTAILKYGQVLMHSHVVIIWLFLAVYAVATIMFCF 832 Query: 403 LITI--ATFQIAANLSMERYALVFGVNTFIALALQTLLTLIVV-DASGLGLEITTQFLIY 459 L+++ + ++A+ Y L + ++A+ + I + L TT F + Sbjct: 833 LVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLG 892 Query: 460 ASYFALIAV 468 + YFAL V Sbjct: 893 SKYFALYEV 901 >gi|31563526 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Homo sapiens] Length = 644 Score = 30.4 bits (67), Expect = 3.9 Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 31/184 (16%) Query: 298 WSVWWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVSTL-LGAVAVFAVGYIKI 356 W+ W LS YF V N + WEK +A+ STL + A + V + I Sbjct: 450 WAFTWPLSFVLYFTVPNCNKPRWEKWFMVTFAS---------STLWIAAFSYMMVWMVTI 500 Query: 357 SWSTWGEMTLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYMLLITIATFQIAANLS 416 T G + + +AA + D C AS +V R + ++ ++ Sbjct: 501 IGYTLGIPDVIMGITFLAAGTSVPD-------CMASLIVAR------QGMGDMAVSNSIG 547 Query: 417 MERYALVFGVNTFIALALQTLLTLIVVDASGLGLEITTQFLIYASYFALIAVVFLASGAV 476 + ++ G+ + ALQTL VD G + + ++ LIY S L+A VF+ V Sbjct: 548 SNVFDILIGLG--LPWALQTL----AVD-YGSYIRLNSRGLIY-SVGLLLASVFVTVFGV 599 Query: 477 SVMK 480 + K Sbjct: 600 HLNK 603 >gi|31542327 solute carrier family 22, member 16 [Homo sapiens] Length = 577 Score = 30.4 bits (67), Expect = 3.9 Identities = 65/302 (21%), Positives = 114/302 (37%), Gaps = 60/302 (19%) Query: 129 FFYGIATATEIAYYSYIYSVVDLGMYQK---VTSYCRSATLVGF---TVGSV-------L 175 F +GIA A + YY+++ + L M V + +G T SV + Sbjct: 193 FLFGIAAAFAVDYYTFMAARFFLAMVASGYLVVGFVYVMEFIGMKSRTWASVHLHSFFAV 252 Query: 176 GQILVSVAGWSL--FSLNVISLTCVSVAFAV-AWFLPMPQKSLFFHHIPSTCQRVNGIKV 232 G +LV++ G+ + + L + L+ V+V F + W LP L Q+ Sbjct: 253 GTLLVALTGYLVRTWWLYQMILSTVTVPFILCCWVLPETPFWLLSEGRYEEAQK------ 306 Query: 233 QNGGIVTDTPASNHLPGWEDIESKIPLNMEEPPVEEP-EPKPDRLLVLKVLWNDFLMCYS 291 + D A + + + L+++ P P E + L L W+ + Sbjct: 307 -----IVDIMAKWNRASSCKLSELLSLDLQGPVSNSPTEVQKHNLSYLFYNWS-----IT 356 Query: 292 SRPLLCWSVWWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVST-LLGAVAVFA 350 R L W +W+ S Y +N ++ GG E ++ LLG V + A Sbjct: 357 KRTLTVWLIWFTGSLGFYSFSLN---------------SVNLGGNEYLNLFLLGVVEIPA 401 Query: 351 VGYIKISWSTWGEMTLSLFSLLIAAAV-----------YIMDTVGNIWVCYASYVVFRII 399 ++ I+ G T+ +SL +A YI+ V + +A F +I Sbjct: 402 YTFVCIAMDKVGRRTVLAYSLFCSALACGVVMVIPQKHYILGVVTAMVGKFAIGAAFGLI 461 Query: 400 YM 401 Y+ Sbjct: 462 YL 463 >gi|17318565 cyclin E2 [Homo sapiens] Length = 404 Score = 29.6 bits (65), Expect = 6.6 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 7/76 (9%) Query: 72 EIYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGL--LAIQFLEF 129 E+ PV S+L L FL D L+ P VLL S T+ + L LAI LEF Sbjct: 237 ELCPVTIISWLNL----FLQVDALKDAPKVLLPQYSQ-ETFIQIAQLLDLCILAIDSLEF 291 Query: 130 FYGIATATEIAYYSYI 145 Y I TA + +++ I Sbjct: 292 QYRILTAAALCHFTSI 307 >gi|134152683 transmembrane protein 214 isoform 2 [Homo sapiens] Length = 644 Score = 29.6 bits (65), Expect = 6.6 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 285 DFLMCYSSRPLLCWSVWWALSTCGYFQVVNYTQGL--WEKVM 324 + L + SRP C ++ WAL G+ N T+GL W +M Sbjct: 198 ELLRSHQSRPAKCLTIMWALGQAGF---ANLTEGLKVWLGIM 236 >gi|134152721 transmembrane protein 214 isoform 1 [Homo sapiens] Length = 689 Score = 29.6 bits (65), Expect = 6.6 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 285 DFLMCYSSRPLLCWSVWWALSTCGYFQVVNYTQGL--WEKVM 324 + L + SRP C ++ WAL G+ N T+GL W +M Sbjct: 243 ELLRSHQSRPAKCLTIMWALGQAGF---ANLTEGLKVWLGIM 281 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.138 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,471,339 Number of Sequences: 37866 Number of extensions: 775994 Number of successful extensions: 2536 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 2523 Number of HSP's gapped (non-prelim): 19 length of query: 497 length of database: 18,247,518 effective HSP length: 106 effective length of query: 391 effective length of database: 14,233,722 effective search space: 5565385302 effective search space used: 5565385302 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.