Guide to the Human Genome
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Name: C2orf83 Sequence: fasta or formatted (96aa) NCBI GI: 241982806
Description:

hypothetical protein LOC56918 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {150aa} hypothetical protein LOC56918 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          6           1
 C cysteine            2.1          2           1
 D aspartate           4.2          4           1
 E glutamate           2.1          2           1
 F phenylalanine       4.2          4           1
 G glycine             5.2          5           1
 H histidine           2.1          2           1
 I isoleucine          5.2          5           1
 K lysine              5.2          5           1
 L leucine             8.3          8           1
 M methionine          5.2          5           1
 N asparagine          3.1          3           1
 P proline            12.5         12           2
 Q glutamine           5.2          5           1
 R arginine            3.1          3           2
 S serine              7.3          7           1
 T threonine           5.2          5           1
 V valine              9.4          9           2
 W tryptophan          1.0          1           1
 Y tyrosine            3.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC56918 isoform 2 
C2orf83               0.608   hypothetical protein LOC56918 isoform 1 
SLC19A3               0.159   solute carrier family 19, member 3 
SLC19A2               0.131   solute carrier family 19, member 2 
SLC19A1               0.080   solute carrier family 19 member 1 
UBA2                  0.017   SUMO-1 activating enzyme subunit 2 
ZNF335                0.011   zinc finger protein 335 
BAT4                  0.011   HLA-B associated transcript 4 
ANKRD43               0.011   ankyrin repeat domain 43 
COL4A1                0.006   alpha 1 type IV collagen preproprotein 
FGD1                  0.006   faciogenital dysplasia protein 
ASPM                  0.006   asp (abnormal spindle)-like, microcephaly associate...
ZYG11A                0.006   PREDICTED: zyg-11 homolog A 
ZYG11A                0.006   zyg-11 homolog A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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