Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CSF2RA Sequence: fasta or formatted (233aa) NCBI GI: 27437040
Description:

colony stimulating factor 2 receptor alpha chain isoform e precursor

Referenced in:

Interleukins and Their Receptors
Macrophages and Monocytes
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [434aa] colony stimulating factor 2 receptor alpha chain isoform f precursor
alt prot [410aa] colony stimulating factor 2 receptor alpha chain isoform g precursor
alt prot [267aa] colony stimulating factor 2 receptor alpha chain isoform h
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [377aa] colony stimulating factor 2 receptor alpha chain isoform b precursor
alt prot [333aa] colony stimulating factor 2 receptor alpha chain isoform c precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          8           2
 C cysteine            4.7         11           1
 D aspartate           4.3         10           1
 E glutamate           4.7         11           1
 F phenylalanine       6.0         14           2
 G glycine             5.6         13           1
 H histidine           2.6          6           1
 I isoleucine          3.9          9           1
 K lysine              3.9          9           2
 L leucine            11.2         26           3
 M methionine          1.3          3           1
 N asparagine          6.9         16           2
 P proline             3.9          9           1
 Q glutamine           3.9          9           2
 R arginine            8.2         19           3
 S serine              9.4         22           2
 T threonine           7.3         17           2
 V valine              4.7         11           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.4          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 2 receptor alpha chain iso... 
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.915   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.328   colony stimulating factor 2 receptor alpha chain is...
IL3RA                 0.178   interleukin 3 receptor, alpha precursor 
IL5RA                 0.052   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.052   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.052   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.052   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.052   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.052   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL13RA1               0.043   interleukin 13 receptor, alpha 1 precursor 
IL13RA2               0.039   interleukin 13 receptor, alpha 2 precursor 
IL2RG                 0.033   interleukin 2 receptor, gamma precursor 
PRLR                  0.015   prolactin receptor 
BIVM                  0.011   basic, immunoglobulin-like variable motif containing...
CD33                  0.009   CD33 antigen isoform 2 precursor 
IL28RA                0.009   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.009   interleukin 28 receptor, alpha isoform 3 
IL28RA                0.009   interleukin 28 receptor, alpha isoform 2 
ITGA8                 0.009   integrin, alpha 8 
LOC100294393          0.007   PREDICTED: similar to interleukin 3 receptor, alpha...
IGSF8                 0.007   immunoglobulin superfamily, member 8 
SMG5                  0.007   SMG5 homolog nonsense mediated mRNA decay factor [H...
BIVM                  0.007   basic, immunoglobulin-like variable motif containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press