Guide to the Human Genome
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Name: CSF2RA Sequence: fasta or formatted (333aa) NCBI GI: 27437036
Description:

colony stimulating factor 2 receptor alpha chain isoform c precursor

Referenced in:

Interleukins and Their Receptors
Macrophages and Monocytes
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [434aa] colony stimulating factor 2 receptor alpha chain isoform f precursor
alt prot [410aa] colony stimulating factor 2 receptor alpha chain isoform g precursor
alt prot [267aa] colony stimulating factor 2 receptor alpha chain isoform h
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [377aa] colony stimulating factor 2 receptor alpha chain isoform b precursor
alt prot [233aa] colony stimulating factor 2 receptor alpha chain isoform e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         12           2
 C cysteine            3.9         13           1
 D aspartate           4.2         14           1
 E glutamate           5.1         17           1
 F phenylalanine       5.4         18           2
 G glycine             4.5         15           1
 H histidine           2.7          9           1
 I isoleucine          3.9         13           1
 K lysine              4.2         14           2
 L leucine            10.2         34           3
 M methionine          0.9          3           1
 N asparagine          7.5         25           2
 P proline             4.5         15           2
 Q glutamine           4.2         14           2
 R arginine            8.4         28           3
 S serine              9.3         31           2
 T threonine           6.9         23           2
 V valine              5.4         18           2
 W tryptophan          1.5          5           1
 Y tyrosine            3.6         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 2 receptor alpha chain iso... 
CSF2RA                0.952   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.949   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.949   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.949   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.949   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.948   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.631   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.544   colony stimulating factor 2 receptor alpha chain is...
IL3RA                 0.170   interleukin 3 receptor, alpha precursor 
IL5RA                 0.087   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.087   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.085   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.085   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.085   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.085   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL13RA1               0.045   interleukin 13 receptor, alpha 1 precursor 
IL2RG                 0.037   interleukin 2 receptor, gamma precursor 
IL13RA2               0.037   interleukin 13 receptor, alpha 2 precursor 
PRLR                  0.025   prolactin receptor 
OSMR                  0.018   oncostatin M receptor 
CSF2RB                0.015   colony stimulating factor 2 receptor, beta precursor ...
IL23R                 0.013   interleukin 23 receptor precursor 
LIFR                  0.012   leukemia inhibitory factor receptor precursor 
LIFR                  0.012   leukemia inhibitory factor receptor precursor [Homo...
BIVM                  0.009   basic, immunoglobulin-like variable motif containin...
BIVM                  0.007   basic, immunoglobulin-like variable motif containing...
ITGA8                 0.007   integrin, alpha 8 
CD33                  0.006   CD33 antigen isoform 2 precursor 
IL28RA                0.006   interleukin 28 receptor, alpha isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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