Guide to the Human Genome
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Name: IL13RA1 Sequence: fasta or formatted (427aa) NCBI GI: 4504647
Description:

interleukin 13 receptor, alpha 1 precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         13           2
 C cysteine            3.5         15           1
 D aspartate           4.4         19           2
 E glutamate           7.7         33           2
 F phenylalanine       3.7         16           1
 G glycine             5.2         22           8
 H histidine           2.1          9           1
 I isoleucine          6.6         28           3
 K lysine              7.0         30           2
 L leucine             8.4         36           3
 M methionine          1.6          7           1
 N asparagine          6.6         28           2
 P proline             6.6         28           2
 Q glutamine           4.0         17           1
 R arginine            3.3         14           2
 S serine              7.7         33           2
 T threonine           5.6         24           1
 V valine              6.8         29           2
 W tryptophan          2.8         12           1
 Y tyrosine            3.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 13 receptor, alpha 1 precursor 
IL13RA2               0.086   interleukin 13 receptor, alpha 2 precursor 
IL5RA                 0.086   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.086   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.062   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.062   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.061   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.061   interleukin 5 receptor, alpha isoform 3 precursor [H...
CSF2RA                0.058   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.058   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.058   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.056   colony stimulating factor 2 receptor alpha chain is...
IL2RG                 0.051   interleukin 2 receptor, gamma precursor 
CSF2RA                0.045   colony stimulating factor 2 receptor alpha chain is...
PRLR                  0.039   prolactin receptor 
CSF2RA                0.038   colony stimulating factor 2 receptor alpha chain is...
IL6ST                 0.037   interleukin 6 signal transducer isoform 2 precursor ...
IL6ST                 0.037   interleukin 6 signal transducer isoform 1 precursor ...
CSF2RB                0.034   colony stimulating factor 2 receptor, beta precursor ...
CSF2RA                0.034   colony stimulating factor 2 receptor alpha chain iso...
CRLF2                 0.033   cytokine receptor-like factor 2 isoform 1 
CSF2RA                0.032   colony stimulating factor 2 receptor alpha chain iso...
CRLF1                 0.032   cytokine receptor-like factor 1 
IL3RA                 0.029   interleukin 3 receptor, alpha precursor 
IL31RA                0.027   gp130-like monocyte receptor 
LIFR                  0.025   leukemia inhibitory factor receptor precursor 
LIFR                  0.025   leukemia inhibitory factor receptor precursor [Homo...
CSF2RA                0.023   colony stimulating factor 2 receptor alpha chain iso...
EPOR                  0.016   erythropoietin receptor precursor 
CRLF2                 0.015   cytokine receptor-like factor 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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