Guide to the Human Genome
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Name: CSF2RA Sequence: fasta or formatted (400aa) NCBI GI: 27437032
Description:

colony stimulating factor 2 receptor alpha chain isoform a precursor

Referenced in:

Interleukins and Their Receptors
Macrophages and Monocytes
Hematopoiesis and Erythrocytes

Other entries for this name:
alt mRNA [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt mRNA [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [434aa] colony stimulating factor 2 receptor alpha chain isoform f precursor
alt prot [410aa] colony stimulating factor 2 receptor alpha chain isoform g precursor
alt prot [267aa] colony stimulating factor 2 receptor alpha chain isoform h
alt prot [377aa] colony stimulating factor 2 receptor alpha chain isoform b precursor
alt prot [333aa] colony stimulating factor 2 receptor alpha chain isoform c precursor
alt prot [233aa] colony stimulating factor 2 receptor alpha chain isoform e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         12           2
 C cysteine            3.2         13           1
 D aspartate           4.8         19           2
 E glutamate           6.8         27           2
 F phenylalanine       5.5         22           2
 G glycine             5.0         20           1
 H histidine           2.2          9           1
 I isoleucine          5.2         21           2
 K lysine              4.5         18           2
 L leucine            10.8         43           3
 M methionine          0.8          3           1
 N asparagine          6.8         27           2
 P proline             4.8         19           2
 Q glutamine           3.8         15           2
 R arginine            7.5         30           3
 S serine              7.2         29           2
 T threonine           6.5         26           2
 V valine              6.8         27           2
 W tryptophan          1.5          6           1
 Y tyrosine            3.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 2 receptor alpha chain iso... 
CSF2RA                1.000   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                1.000   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.979   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.938   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.792   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.787   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.662   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.526   colony stimulating factor 2 receptor alpha chain iso...
IL3RA                 0.186   interleukin 3 receptor, alpha precursor 
IL5RA                 0.090   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.090   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.071   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.071   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.071   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.071   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL13RA1               0.064   interleukin 13 receptor, alpha 1 precursor 
PRLR                  0.041   prolactin receptor 
IL2RG                 0.040   interleukin 2 receptor, gamma precursor 
IL13RA2               0.034   interleukin 13 receptor, alpha 2 precursor 
OSMR                  0.015   oncostatin M receptor 
CSF2RB                0.015   colony stimulating factor 2 receptor, beta precursor ...
IL23R                 0.011   interleukin 23 receptor precursor 
LIFR                  0.010   leukemia inhibitory factor receptor precursor 
LIFR                  0.010   leukemia inhibitory factor receptor precursor [Homo...
ZNF295                0.009   zinc finger protein 295 isoform S 
ZNF295                0.009   zinc finger protein 295 isoform L 
ZNF295                0.009   zinc finger protein 295 isoform L 
ITGA8                 0.006   integrin, alpha 8 
BIVM                  0.006   basic, immunoglobulin-like variable motif containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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