Guide to the Human Genome
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Search of human proteins with 25777657

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]
         (165 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]                 345   8e-96
gi|25777655 CD200 receptor 1 isoform b [Homo sapiens]                 332   7e-92
gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]                 313   4e-86
gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]                 300   4e-82
gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo sa...   231   3e-61
gi|7657361 contactin 6 [Homo sapiens]                                  33   0.15 
gi|222144244 fibroblast growth factor receptor 2 isoform 9 precu...    32   0.25 
gi|222144231 fibroblast growth factor receptor 2 isoform 3 precu...    32   0.25 
gi|222144241 fibroblast growth factor receptor 2 isoform 8 precu...    32   0.25 
gi|222144239 fibroblast growth factor receptor 2 isoform 7 precu...    32   0.25 
gi|222144237 fibroblast growth factor receptor 2 isoform 6 precu...    32   0.25 
gi|222144235 fibroblast growth factor receptor 2 isoform 5 precu...    32   0.25 
gi|221316639 fibroblast growth factor receptor 2 isoform 1 precu...    32   0.25 
gi|221316638 fibroblast growth factor receptor 2 isoform 2 precu...    32   0.25 
gi|222144233 fibroblast growth factor receptor 2 isoform 4 precu...    32   0.33 
gi|73695881 aldehyde dehydrogenase 3B2 [Homo sapiens]                  32   0.33 
gi|73695879 aldehyde dehydrogenase 3B2 [Homo sapiens]                  32   0.33 
gi|118572606 hemicentin 1 [Homo sapiens]                               30   0.95 
gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor [...    30   0.95 
gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor [...    30   0.95 
gi|139948432 adlican [Homo sapiens]                                    29   1.6  
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]                    29   2.1  
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]                    29   2.1  
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]                    29   2.1  
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42...    29   2.1  
gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor [...    29   2.1  
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]       29   2.1  
gi|238814371 aldehyde dehydrogenase 3B1 isoform a [Homo sapiens]       28   2.8  
gi|71773324 aldehyde dehydrogenase 3B1 isoform b [Homo sapiens]        28   2.8  
gi|4502043 aldehyde dehydrogenase 3B1 isoform a [Homo sapiens]         28   2.8  

>gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]
          Length = 165

 Score =  345 bits (886), Expect = 8e-96
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60
           MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60

Query: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120
           CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR
Sbjct: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120

Query: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHILRYFTSPDL 165
           TVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHILRYFTSPDL
Sbjct: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHILRYFTSPDL 165


>gi|25777655 CD200 receptor 1 isoform b [Homo sapiens]
          Length = 188

 Score =  332 bits (852), Expect = 7e-92
 Identities = 165/188 (87%), Positives = 165/188 (87%), Gaps = 23/188 (12%)

Query: 1   MLCPWRTANLGLLLILTIFLVA-----------------------ASSSLCMDEKQITQN 37
           MLCPWRTANLGLLLILTIFLVA                       ASSSLCMDEKQITQN
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60

Query: 38  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 97
           YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 61  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120

Query: 98  TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHIL 157
           TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHIL
Sbjct: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHIL 180

Query: 158 RYFTSPDL 165
           RYFTSPDL
Sbjct: 181 RYFTSPDL 188


>gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]
          Length = 325

 Score =  313 bits (802), Expect = 4e-86
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60
           MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLC 60

Query: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120
           CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR
Sbjct: 61  CPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIR 120

Query: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
           TVAITHDGYYRCIMVTPDGNFHRGYHLQVL
Sbjct: 121 TVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150


>gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]
          Length = 348

 Score =  300 bits (768), Expect = 4e-82
 Identities = 150/173 (86%), Positives = 150/173 (86%), Gaps = 23/173 (13%)

Query: 1   MLCPWRTANLGLLLILTIFLVA-----------------------ASSSLCMDEKQITQN 37
           MLCPWRTANLGLLLILTIFLVA                       ASSSLCMDEKQITQN
Sbjct: 1   MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60

Query: 38  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 97
           YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 61  YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120

Query: 98  TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
           TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL
Sbjct: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 173


>gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
           sapiens]
          Length = 271

 Score =  231 bits (588), Expect = 3e-61
 Identities = 114/138 (82%), Positives = 119/138 (86%)

Query: 13  LLILTIFLVAASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIII 72
           LLI  I +V+ASSS CM  KQ+TQNYS + AE N S PV M  NAVLCCPPIALRNLIII
Sbjct: 6   LLISIIIMVSASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIII 65

Query: 73  TWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRC 132
           TWEIILRGQPSCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V  THDGYYR 
Sbjct: 66  TWEIILRGQPSCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRG 125

Query: 133 IMVTPDGNFHRGYHLQVL 150
           I+VTPDGNFHRGYHLQVL
Sbjct: 126 IVVTPDGNFHRGYHLQVL 143


>gi|7657361 contactin 6 [Homo sapiens]
          Length = 1028

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 59  LCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQ 118
           LC     L +L  +  +II+RG P        E  + ++ + T  +++W + PD NS +Q
Sbjct: 576 LCTVQTTLESLSAVA-DIIVRGPPG-----PPEDVQVEDISSTTSQLSWRAGPDNNSPIQ 629

Query: 119 IRTV 122
           I T+
Sbjct: 630 IFTI 633


>gi|222144244 fibroblast growth factor receptor 2 isoform 9
           precursor [Homo sapiens]
          Length = 680

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 94  GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 149

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 150 SINHTYHLDVVERSPH 165


>gi|222144231 fibroblast growth factor receptor 2 isoform 3
           precursor [Homo sapiens]
          Length = 769

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 183 GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 238

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 239 SINHTYHLDVVERSPH 254


>gi|222144241 fibroblast growth factor receptor 2 isoform 8
           precursor [Homo sapiens]
          Length = 704

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 68  GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 123

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 124 SINHTYHLDVVERSPH 139


>gi|222144239 fibroblast growth factor receptor 2 isoform 7
           precursor [Homo sapiens]
          Length = 705

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 183 GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 238

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 239 SINHTYHLDVVERSPH 254


>gi|222144237 fibroblast growth factor receptor 2 isoform 6
           precursor [Homo sapiens]
          Length = 706

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 68  GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 123

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 124 SINHTYHLDVVERSPH 139


>gi|222144235 fibroblast growth factor receptor 2 isoform 5
           precursor [Homo sapiens]
          Length = 707

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 94  GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 149

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 150 SINHTYHLDVVERSPH 165


>gi|221316639 fibroblast growth factor receptor 2 isoform 1
           precursor [Homo sapiens]
          Length = 821

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 183 GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 238

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 239 SINHTYHLDVVERSPH 254


>gi|221316638 fibroblast growth factor receptor 2 isoform 2
           precursor [Homo sapiens]
          Length = 822

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 183 GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 238

Query: 140 NFHRGYHLQVLGKEHH 155
           + +  YHL V+ +  H
Sbjct: 239 SINHTYHLDVVERSPH 254


>gi|222144233 fibroblast growth factor receptor 2 isoform 4
           precursor [Homo sapiens]
          Length = 709

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 80  GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 139
           G P  T  + K   E K+    + RI      +Q+  L + +V  +  G Y C++    G
Sbjct: 183 GNPMPTMRWLKNGKEFKQ----EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG 238

Query: 140 NFHRGYHLQVL--GKEHHILRYFTSPD 164
           + +  YHL V+  G+E  I     SPD
Sbjct: 239 SINHTYHLDVVAPGREKEIT---ASPD 262


>gi|73695881 aldehyde dehydrogenase 3B2 [Homo sapiens]
          Length = 385

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 1  MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEV 45
          ++ PW    L L L+L +  +AA S + +   +I+Q   KVLAEV
Sbjct: 29 IIAPWNYP-LNLTLVLLVGALAAGSCVVLKPSEISQGTEKVLAEV 72


>gi|73695879 aldehyde dehydrogenase 3B2 [Homo sapiens]
          Length = 385

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 1  MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEV 45
          ++ PW    L L L+L +  +AA S + +   +I+Q   KVLAEV
Sbjct: 29 IIAPWNYP-LNLTLVLLVGALAAGSCVVLKPSEISQGTEKVLAEV 72


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 117  LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV 149
            LQI  V + H G Y C+  +P G+  R + L V
Sbjct: 2535 LQITNVQVPHTGRYTCLASSPAGHKSRSFSLNV 2567


>gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor
           [Homo sapiens]
          Length = 1070

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGK 152
           +N  L+I +V +    +YRC+  TP G+      +QVL K
Sbjct: 462 KNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVLEK 501


>gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor
           [Homo sapiens]
          Length = 1014

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGK 152
           +N  L+I +V +    +YRC+  TP G+      +QVL K
Sbjct: 462 KNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVLEK 501


>gi|139948432 adlican [Homo sapiens]
          Length = 2828

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 114 NSDLQIRTVAITHDGYYRCIMVTPDGNFH 142
           N  L I  V ++  GYYRC+ V   G  H
Sbjct: 633 NGTLSIPKVQVSDSGYYRCVAVNQQGADH 661


>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3874

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEH 154
            +Q   LQ+  V     G Y C+ V+  G   R + L V+   H
Sbjct: 2262 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPH 2304


>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 5065

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEH 154
            +Q   LQ+  V     G Y C+ V+  G   R + L V+   H
Sbjct: 3453 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPH 3495


>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3783

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 112  DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEH 154
            +Q   LQ+  V     G Y C+ V+  G   R + L V+   H
Sbjct: 2171 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPH 2213


>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
            precursor [Homo sapiens]
          Length = 2012

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 80   GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCI 133
            G PS    + K++N T      D R +  S    N    IRTV     GYY CI
Sbjct: 1311 GDPSPAVKWMKDSNGTPSLVTIDGRRSIFS----NGSFIIRTVKAEDSGYYSCI 1360


>gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor
           [Homo sapiens]
          Length = 1030

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 113 QNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
           +N  L+I +V +    +YRC+  TP G+      +QVL
Sbjct: 462 KNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVL 499


>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
          Length = 2623

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 16/97 (16%)

Query: 58   VLCCPPIAL---RNLIIITWEIILR--------GQPSCTKAYKKETNETKETNCTDERIT 106
            V+  PP+ L   R +I+ TW   L+         QPS        T E K    T+ ++ 
Sbjct: 1837 VIAAPPVILEQRRQVIVGTWGESLKLPCTAKGTPQPSVYWVLSDGT-EVKPLQFTNSKLF 1895

Query: 107  WVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHR 143
              S    N  L IR +A +  G Y CI  +  G+  R
Sbjct: 1896 LFS----NGTLYIRNLASSDRGTYECIATSSTGSERR 1928



 Score = 27.7 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 114  NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLGKEHHILRYFTS 162
            N  L I  V +   G Y C+   P G+  + Y L V+ K   I   +T+
Sbjct: 2195 NGSLTINKVKLLDSGEYVCVARNPSGDDTKMYKLDVVSKPPLINGLYTN 2243



 Score = 27.3 bits (59), Expect = 6.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 114 NSDLQIRTVAITHDGYYRCIMVTPDG 139
           N  L+I  V     GYYRC+   P G
Sbjct: 627 NGTLRILQVTPKDQGYYRCVAANPSG 652


>gi|238814371 aldehyde dehydrogenase 3B1 isoform a [Homo sapiens]
          Length = 468

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEV 45
           ++ PW    L L L+  +  +AA + + +   +I++N  K+LAEV
Sbjct: 110 IIAPWNYP-LNLTLVPLVGALAAGNCVVLKPSEISKNVEKILAEV 153


>gi|71773324 aldehyde dehydrogenase 3B1 isoform b [Homo sapiens]
          Length = 431

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEV 45
           ++ PW    L L L+  +  +AA + + +   +I++N  K+LAEV
Sbjct: 73  IIAPWNYP-LNLTLVPLVGALAAGNCVVLKPSEISKNVEKILAEV 116


>gi|4502043 aldehyde dehydrogenase 3B1 isoform a [Homo sapiens]
          Length = 468

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 1   MLCPWRTANLGLLLILTIFLVAASSSLCMDEKQITQNYSKVLAEV 45
           ++ PW    L L L+  +  +AA + + +   +I++N  K+LAEV
Sbjct: 110 IIAPWNYP-LNLTLVPLVGALAAGNCVVLKPSEISKNVEKILAEV 153


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.135    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,359,455
Number of Sequences: 37866
Number of extensions: 245917
Number of successful extensions: 747
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 135
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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