Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 24308414
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308414 solute carrier family 10, member 4 [Homo sapiens] 883 0.0
gi|4506971 solute carrier family 10, member 1 [Homo sapiens] 226 4e-59
gi|4506973 solute carrier family 10 (sodium/bile acid cotranspor... 216 2e-56
gi|37537552 sodium-dependent organic anion transporter [Homo sap... 206 3e-53
gi|58219066 solute carrier family 10 (sodium/bile acid cotranspo... 135 1e-31
gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo ... 120 2e-27
gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo ... 120 2e-27
gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo sa... 120 2e-27
gi|116734689 socius isoform 3 [Homo sapiens] 47 3e-05
gi|116734681 socius isoform 1 [Homo sapiens] 47 3e-05
gi|116734679 socius isoform 2 [Homo sapiens] 47 3e-05
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 42 0.001
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 42 0.001
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 42 0.001
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 42 0.001
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 42 0.001
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 42 0.001
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 42 0.001
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 41 0.002
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 41 0.002
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 41 0.002
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 41 0.002
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 41 0.002
gi|89886480 zinedin isoform 2 [Homo sapiens] 40 0.003
gi|89886477 zinedin isoform 1 [Homo sapiens] 40 0.003
gi|133922582 zinc finger protein 358 [Homo sapiens] 40 0.003
gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens] 40 0.003
gi|110227615 echinoderm microtubule associated protein like 3 [H... 40 0.005
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 39 0.007
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 39 0.007
>gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
Length = 437
Score = 883 bits (2281), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MDGNDNVTLLFAPLLRDNYTLAPNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSP 60
MDGNDNVTLLFAPLLRDNYTLAPNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSP
Sbjct: 1 MDGNDNVTLLFAPLLRDNYTLAPNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSP 60
Query: 61 GPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHALPFWDTPLNHGLNVFVGAALCITMLGL 120
GPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHALPFWDTPLNHGLNVFVGAALCITMLGL
Sbjct: 61 GPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHALPFWDTPLNHGLNVFVGAALCITMLGL 120
Query: 121 GCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLCGCCPGG 180
GCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLCGCCPGG
Sbjct: 121 GCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLCGCCPGG 180
Query: 181 NLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPLGTVTLT 240
NLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPLGTVTLT
Sbjct: 181 NLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPLGTVTLT 240
Query: 241 LCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPELLASIPAAV 300
LCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPELLASIPAAV
Sbjct: 241 LCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPELLASIPAAV 300
Query: 301 YVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPPQFIGSM 360
YVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPPQFIGSM
Sbjct: 301 YVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPPQFIGSM 360
Query: 361 YMFPLLYALFQSAEAGIFVLIYKMYGSEMLHKRDPLDEDEDTDISYKKLKEEEMADTSYG 420
YMFPLLYALFQSAEAGIFVLIYKMYGSEMLHKRDPLDEDEDTDISYKKLKEEEMADTSYG
Sbjct: 361 YMFPLLYALFQSAEAGIFVLIYKMYGSEMLHKRDPLDEDEDTDISYKKLKEEEMADTSYG 420
Query: 421 TVKAENIIMMETAQTSL 437
TVKAENIIMMETAQTSL
Sbjct: 421 TVKAENIIMMETAQTSL 437
>gi|4506971 solute carrier family 10, member 1 [Homo sapiens]
Length = 349
Score = 226 bits (575), Expect = 4e-59
Identities = 116/308 (37%), Positives = 183/308 (59%), Gaps = 3/308 (0%)
Query: 78 ASHGPSPFPRPWAPHALPFWDTPLNHGLNVFVGAALCITMLGLGCTVDVNHFGAHVRRPV 137
A + +PF P+ F P + L+V + L ML LGCT++ + AH+ +P
Sbjct: 3 AHNASAPFNFTLPPN---FGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPK 59
Query: 138 GALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLS 197
G +A + Q+G++PL AF+L F+L + A+A+L+CGC PGGNLSN+ SL + GDMNLS
Sbjct: 60 GLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLS 119
Query: 198 IIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPLGTVTLTLCSTLIPIGLGVFIRYK 257
I+MT ST AL +MPL L+IYS + + +P + ++L LIP +G+ ++ K
Sbjct: 120 IVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSK 179
Query: 258 YSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPELLASIPAAVYVIAIFMPLAGYASGYG 317
+ Y++K + +L+ V + +++ +G ++ ++ + + MP G+ GY
Sbjct: 180 RPQYMRYVIKGGMIIILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYV 239
Query: 318 LATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPPQFIGSMYMFPLLYALFQSAEAGI 377
L+ LF L C+RTV +ETG QNVQLC+ IL +AFPP+ IG ++ FPLLY +FQ E +
Sbjct: 240 LSALFCLNGRCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLL 299
Query: 378 FVLIYKMY 385
+ I+ Y
Sbjct: 300 LIAIFWCY 307
>gi|4506973 solute carrier family 10 (sodium/bile acid cotransporter
family), member 2 [Homo sapiens]
Length = 348
Score = 216 bits (551), Expect = 2e-56
Identities = 106/281 (37%), Positives = 178/281 (63%), Gaps = 3/281 (1%)
Query: 105 LNVFVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLD 164
L+ + L + M +GC V++ F H++RP G + LCQFG++PL F+L++AF +
Sbjct: 34 LSTVLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDIL 93
Query: 165 EVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWI 224
+ AV VL+ GCCPGG SN+++ VDGDM+LS+ MT STLLAL +MPLCL IY+ W+
Sbjct: 94 PLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWV 153
Query: 225 NTPIVQLLPLGTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMT 284
++ + ++P + +L + ++P+ +G+F+ +K+ + A I+K+ + + +V++ ++
Sbjct: 154 DSGSI-VIPYDNIGTSLVALVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVLIAVVG 212
Query: 285 GTMLGPELLASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLC 344
G + + I +++I P+AGY+ G+ LA + LP RTV ETG QN QLC
Sbjct: 213 GILYQSAWI--IAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQLC 270
Query: 345 TAILKLAFPPQFIGSMYMFPLLYALFQSAEAGIFVLIYKMY 385
+ I++L+F P+ + ++ FPL+Y++FQ A A IF+ Y Y
Sbjct: 271 STIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAY 311
>gi|37537552 sodium-dependent organic anion transporter [Homo
sapiens]
Length = 377
Score = 206 bits (525), Expect = 3e-53
Identities = 106/278 (38%), Positives = 166/278 (59%), Gaps = 3/278 (1%)
Query: 115 ITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLC 174
+ M LGC+V++ +H+RRP G + LCQFGL+P A+LLA++F L V A+AVL+
Sbjct: 44 LLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIM 103
Query: 175 GCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPL 234
GCCPGG +SN+ + VDGDM+LSI MT ST+ AL +MPLC+++Y+W+W + +P
Sbjct: 104 GCCPGGTISNIFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSW-SLQQNLTIPY 162
Query: 235 GTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPELLA 294
+ +TL IP+ GV++ Y++ + + I+K+ V L+V+ + G +L
Sbjct: 163 QNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLLVVAV-AGVVLAKGSWN 221
Query: 295 SIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPP 354
S + I+ PL G+ +G+ LA H RT+ LETG+QN+Q+C +L+L+F
Sbjct: 222 S-DITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLSFTA 280
Query: 355 QFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGSEMLHK 392
+ + M FPL Y LFQ + + V Y+ Y + +K
Sbjct: 281 EHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNK 318
>gi|58219066 solute carrier family 10 (sodium/bile acid
cotransporter family), member 5 [Homo sapiens]
Length = 438
Score = 135 bits (339), Expect = 1e-31
Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 4/272 (1%)
Query: 113 LCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVL 172
+ + GC +++ F +RP+ +L A+ QF L+P FLL+ L E A V+
Sbjct: 151 ILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVV 210
Query: 173 LCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLL 232
+ CPGG L +LL+DGD L+I+MT +STLLAL++MP+ +IYS + +
Sbjct: 211 MTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYS-RILGLSGTFHI 269
Query: 233 PLGTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPEL 292
P+ + TL L+P+ +G+ I+++ A ++ ++ + + V +T T +G
Sbjct: 270 PVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFT-VGLVF 328
Query: 293 LASIPAAVYVIAIFMPLAGYASGYGLATLFHLP-PNCKRTVCLETGSQNVQLCTAILKLA 351
L + V ++ + +P G GY A + LP P CK TV +E+G N L A+++L+
Sbjct: 329 LKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCK-TVAIESGMLNSFLALAVIQLS 387
Query: 352 FPPQFIGSMYMFPLLYALFQSAEAGIFVLIYK 383
FP + P A+ E + +L+YK
Sbjct: 388 FPQSKANLASVAPFTVAMCSGCEMLLIILVYK 419
>gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo
sapiens]
Length = 477
Score = 120 bits (301), Expect = 2e-27
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 4/274 (1%)
Query: 115 ITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLC 174
+ GC V++ ++ P LL L QF ++PL AFL+A F L + A+ +++
Sbjct: 202 VNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIIT 261
Query: 175 GCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPL 234
PGG S L SLL+ GD+ L+I MT ST+ A +PL IYS ++ +P+
Sbjct: 262 CSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYS-RLLSIHETLHVPI 320
Query: 235 GTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVK-VSLWSLLVTLVVLFIMTGTMLGPELL 293
+ TL IPI +GV I+ K + + +++ V +S ++ L LF+ +G +L
Sbjct: 321 SKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFL--AYRMGVFIL 378
Query: 294 ASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFP 353
A I + ++ I +PL G GY LAT LP +RTV +E G QN L A+L+L+
Sbjct: 379 AGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLR 438
Query: 354 PQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGS 387
P + AL ++E V+ + +Y S
Sbjct: 439 RLQADYASQAPFIVALSGTSEMLALVIGHFIYSS 472
>gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo
sapiens]
Length = 448
Score = 120 bits (301), Expect = 2e-27
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 4/274 (1%)
Query: 115 ITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLC 174
+ GC V++ ++ P LL L QF ++PL AFL+A F L + A+ +++
Sbjct: 173 VNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIIT 232
Query: 175 GCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPL 234
PGG S L SLL+ GD+ L+I MT ST+ A +PL IYS ++ +P+
Sbjct: 233 CSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYS-RLLSIHETLHVPI 291
Query: 235 GTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVK-VSLWSLLVTLVVLFIMTGTMLGPELL 293
+ TL IPI +GV I+ K + + +++ V +S ++ L LF+ +G +L
Sbjct: 292 SKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFL--AYRMGVFIL 349
Query: 294 ASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFP 353
A I + ++ I +PL G GY LAT LP +RTV +E G QN L A+L+L+
Sbjct: 350 AGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLR 409
Query: 354 PQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGS 387
P + AL ++E V+ + +Y S
Sbjct: 410 RLQADYASQAPFIVALSGTSEMLALVIGHFIYSS 443
>gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo
sapiens]
Length = 477
Score = 120 bits (301), Expect = 2e-27
Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 4/274 (1%)
Query: 115 ITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVLLC 174
+ GC V++ ++ P LL L QF ++PL AFL+A F L + A+ +++
Sbjct: 202 VNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLIIT 261
Query: 175 GCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLLPL 234
PGG S L SLL+ GD+ L+I MT ST+ A +PL IYS ++ +P+
Sbjct: 262 CSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYS-RLLSIHETLHVPI 320
Query: 235 GTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVK-VSLWSLLVTLVVLFIMTGTMLGPELL 293
+ TL IPI +GV I+ K + + +++ V +S ++ L LF+ +G +L
Sbjct: 321 SKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFL--AYRMGVFIL 378
Query: 294 ASIPAAVYVIAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFP 353
A I + ++ I +PL G GY LAT LP +RTV +E G QN L A+L+L+
Sbjct: 379 AGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLSLR 438
Query: 354 PQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGS 387
P + AL ++E V+ + +Y S
Sbjct: 439 RLQADYASQAPFIVALSGTSEMLALVIGHFIYSS 472
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 47.0 bits (110), Expect = 3e-05
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 11 FAPLLRDNYTLAPNASSL------------GPGTDLALAPASSAGPGPGLSLGPGPSFGF 58
F P L + TL A+ L P + L +P GPGPG S GPGP G
Sbjct: 324 FPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGP--GP 381
Query: 59 SPGPTPTPEPTTSGLAGGAASHGPSPFPR 87
SPGP P P P GPSP P+
Sbjct: 382 SPGPGPGPSPCP----------GPSPSPQ 400
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 47.0 bits (110), Expect = 3e-05
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 11 FAPLLRDNYTLAPNASSL------------GPGTDLALAPASSAGPGPGLSLGPGPSFGF 58
F P L + TL A+ L P + L +P GPGPG S GPGP G
Sbjct: 411 FPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGP--GP 468
Query: 59 SPGPTPTPEPTTSGLAGGAASHGPSPFPR 87
SPGP P P P GPSP P+
Sbjct: 469 SPGPGPGPSPCP----------GPSPSPQ 487
>gi|116734679 socius isoform 2 [Homo sapiens]
Length = 520
Score = 47.0 bits (110), Expect = 3e-05
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 11 FAPLLRDNYTLAPNASSL------------GPGTDLALAPASSAGPGPGLSLGPGPSFGF 58
F P L + TL A+ L P + L +P GPGPG S GPGP G
Sbjct: 444 FPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLKFSPGPCPGPGPGPSPGPGP--GP 501
Query: 59 SPGPTPTPEPTTSGLAGGAASHGPSPFPR 87
SPGP P P P GPSP P+
Sbjct: 502 SPGPGPGPSPCP----------GPSPSPQ 520
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/59 (47%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS-HGPSPFPRPWAPHALP 95
P P PG S GPGPS G GP+P P P G A S GPSP P P A H +P
Sbjct: 6 PPLGGTPRPGPSPGPGPSPGAMLGPSPGPSP------GSAHSMMGPSPGP-PSAGHPIP 57
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 15/72 (20%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGP-----SFGFSPGPTPTPEPTTSGLAGGA 77
P+ S+ GPG GPGPG GPGP S G P P SG+ G
Sbjct: 223 PSVSATGPG----------PGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGM 272
Query: 78 ASHGPSPFPRPW 89
P P+PW
Sbjct: 273 PGQPPGGPPKPW 284
Score = 32.7 bits (73), Expect = 0.67
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 52 PGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHAL 94
P P G +P P P+P P S A GPSP P P + H++
Sbjct: 4 PDPPLGGTPRPGPSPGPGPS----PGAMLGPSPGPSPGSAHSM 42
Score = 29.3 bits (64), Expect = 7.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPS-FGFSPGPTPTPEPTTSGLAGG 76
GP +P + GP PG S G S G SPGP P + GG
Sbjct: 15 GPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGG 63
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 32 TDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAP 91
TD P PGPG S PGP G SPGP P+P S + GPSP P P
Sbjct: 5 TDPGAMPHPGPSPGPGPS--PGPILGPSPGPGPSPGSVHSMM-------GPSPGP-PSVS 54
Query: 92 HALP 95
H +P
Sbjct: 55 HPMP 58
Score = 31.6 bits (70), Expect = 1.5
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 42 AGPGPGLSLGPGPSFGF-----SPGPTPTPEPTTSGLAGGAASHGPS-PFPRPWAP 91
+GPGP LS GPS +PG P+P P + AA GPS P P P P
Sbjct: 263 SGPGPELS---GPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQP 315
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 32 TDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAP 91
TD P PGPG S PGP G SPGP P+P S + GPSP P P
Sbjct: 5 TDPGAMPHPGPSPGPGPS--PGPILGPSPGPGPSPGSVHSMM-------GPSPGP-PSVS 54
Query: 92 HALP 95
H +P
Sbjct: 55 HPMP 58
Score = 31.6 bits (70), Expect = 1.5
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 42 AGPGPGLSLGPGPSFGF-----SPGPTPTPEPTTSGLAGGAASHGPS-PFPRPWAP 91
+GPGP LS GPS +PG P+P P + AA GPS P P P P
Sbjct: 263 SGPGPELS---GPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQP 315
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPG-----PSFGFSPGPTPTPEPTTSGLAGGAASHGPS 83
GPG+ L P +GP PGL PG P+FG PGP P P P G G AS
Sbjct: 795 GPGS-LGGPPGFGSGP-PGLGSAPGHLGGPPAFGPGPGPGPGPGPIHIGGPPGFASSSGK 852
Query: 84 PFPRPWAPHALPF 96
P P +PF
Sbjct: 853 PGPTVIKVQNMPF 865
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPG-----PSFGFSPGPTPTPEPTTSGLAGGAASHGPS 83
GPG+ L P +GP PGL PG P+FG PGP P P P G G AS
Sbjct: 795 GPGS-LGGPPGFGSGP-PGLGSAPGHLGGPPAFGPGPGPGPGPGPIHIGGPPGFASSSGK 852
Query: 84 PFPRPWAPHALPF 96
P P +PF
Sbjct: 853 PGPTVIKVQNMPF 865
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPSFG----FSPGPTPTPEPTTSGLAGGAASHGPSP 84
GPG + P+ + PGPG GPGP SPG P P +G + P+P
Sbjct: 261 GPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAP 320
Query: 85 FPRPWA-PHALPFW 97
P P + P P W
Sbjct: 321 IPGPGSLPAPAPLW 334
Score = 38.1 bits (87), Expect = 0.016
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPW---APHAL 94
P +GP PGL GP P PGP P P+ + + G GP P P +P +L
Sbjct: 240 PGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSL 299
Query: 95 P 95
P
Sbjct: 300 P 300
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGP 82
P A S GPG A P + PGP PGP G + P+P P P ++G GP
Sbjct: 89 PAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGP 148
Query: 83 --SPFPRP 88
P P P
Sbjct: 149 FRGPIPGP 156
Score = 36.6 bits (83), Expect = 0.046
Identities = 21/60 (35%), Positives = 25/60 (41%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRP 88
GP + PA GP G PGP G PGP P P ++G + P P P P
Sbjct: 123 GPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGP 182
Score = 33.5 bits (75), Expect = 0.39
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGP--GPSFGFSPGPTP--TPEPTTSGLAGGAASHGPSP 84
GP P S P PG GP GP+ G PGP P P P + + G + P P
Sbjct: 147 GPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGP 206
Query: 85 FPRP 88
P P
Sbjct: 207 IPGP 210
Score = 33.5 bits (75), Expect = 0.39
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 29 GPGTDLALAPASSAGPGPGLSLG--PGPSFGFSPGP----------TPTPEPTTSGLAGG 76
GP + A P +GP G + G PGP+ G PGP P P P ++G
Sbjct: 155 GPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGP 214
Query: 77 AASHGPSPFPRP 88
+ P P P P
Sbjct: 215 ISGPNPGPIPGP 226
Score = 32.7 bits (73), Expect = 0.67
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRP 88
P + GP PG GP P P P P P P + ++G P P P P
Sbjct: 180 PGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGP 230
Score = 32.3 bits (72), Expect = 0.87
Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 12 APLLRDNYTLAPNASSLG--PGTDLALAPASSAGPGPGLSLGPGPSFGFSPGP--TPTPE 67
APL+ AP G P + + A GPG G SPGP P P
Sbjct: 44 APLVPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPI 103
Query: 68 PTTSGLAGGAASHGPSPFPRP 88
P + + G P P P P
Sbjct: 104 PGPAQIPGPLPGSIPGPIPGP 124
Score = 32.3 bits (72), Expect = 0.87
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGP--GPSFGFSPGPTPTPEPTTSGLAGGAASH 80
PN + PG P + P PG GP GP G +PGP P P P G +
Sbjct: 182 PNPGPI-PGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIP------GPISGP 234
Query: 81 GPSPFPRP 88
P P P P
Sbjct: 235 NPGPIPGP 242
Score = 32.3 bits (72), Expect = 0.87
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRP 88
GP P S PGP PGP G +PGP P P ++G P P P P
Sbjct: 205 GPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGP------ISGPNPGLIPGPIPGP 258
Score = 31.2 bits (69), Expect = 1.9
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGP--------GPSFGFSPGPTPTPEPTTSGLAGGAASH 80
GP + P GP PG GP GP G +PGP P P P G G S
Sbjct: 137 GPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNP---GPIPGPIS- 192
Query: 81 GPSPFP 86
GP P P
Sbjct: 193 GPIPGP 198
Score = 30.4 bits (67), Expect = 3.3
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 29 GPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPR- 87
GPG L+ S G PGL+ GP G G P P P L P+P P
Sbjct: 283 GPGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSL--------PAPAPLW 334
Query: 88 PWAPHALPF 96
P +P A F
Sbjct: 335 PQSPDASDF 343
Score = 29.3 bits (64), Expect = 7.4
Identities = 16/45 (35%), Positives = 18/45 (40%)
Query: 44 PGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRP 88
PGP PGP G +P P P P + G P P P P
Sbjct: 146 PGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGP 190
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEP 68
P S GPG A AP S+ PGPG + G G G SPGPT PEP
Sbjct: 19 PLGSGAGPGPTGA-APVSAPAPGPGPA-GKGGGGGGSPGPTAGPEP 62
Score = 35.8 bits (81), Expect = 0.079
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 35 ALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGL-AGGAASHGPSPFPRP 88
A+A A+S+ G GPGP+ G +P P P P +G GG S GP+ P P
Sbjct: 9 AVAAAASSCRPLGSGAGPGPT-GAAPVSAPAPGPGPAGKGGGGGGSPGPTAGPEP 62
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 23 PNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEP 68
P S GPG A AP S+ PGPG + G G G SPGPT PEP
Sbjct: 19 PLGSGAGPGPTGA-APVSAPAPGPGPA-GKGGGGGGSPGPTAGPEP 62
Score = 35.8 bits (81), Expect = 0.079
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 35 ALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGL-AGGAASHGPSPFPRP 88
A+A A+S+ G GPGP+ G +P P P P +G GG S GP+ P P
Sbjct: 9 AVAAAASSCRPLGSGAGPGPT-GAAPVSAPAPGPGPAGKGGGGGGSPGPTAGPEP 62
>gi|133922582 zinc finger protein 358 [Homo sapiens]
Length = 568
Score = 40.4 bits (93), Expect = 0.003
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 25 ASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSP----GPTPTPEPTTSGLAGGAASH 80
AS + PG L P + + G GL L PG S G +P GP P+P++ L G ++
Sbjct: 427 ASMMRPGQVSLLGPDAVSVLGSGLGLSPGTSSGRNPDPGSGPGTLPDPSSKPLPGSRSTP 486
Query: 81 GPSP 84
P+P
Sbjct: 487 SPTP 490
Score = 35.8 bits (81), Expect = 0.079
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 21 LAPNASSLGPGTDLALAPASSAGPGPGLSLGPG----PSFGFSPG----PTPTPEPTTSG 72
L P+A S+ G+ L L+P +S+G P GPG PS PG P+PTP ++
Sbjct: 438 LGPDAVSV-LGSGLGLSPGTSSGRNPDPGSGPGTLPDPSSKPLPGSRSTPSPTPVESSDP 496
Query: 73 LAGGAASHGPSPFPRP 88
AG A GP P P
Sbjct: 497 KAGHDA--GPDLVPSP 510
Score = 30.0 bits (66), Expect = 4.3
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 38 PASSAGPGPGLSLGPG--PSFGFSPGPTPTPEPTTSGLAGGAASHGPSPFPRPWAPHALP 95
P S+ P G GP PS P P+P P+P S + P R ALP
Sbjct: 490 PVESSDPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDPCSPTRGTVSPALP 549
Query: 96 FWDTP 100
++P
Sbjct: 550 TGESP 554
>gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]
Length = 1104
Score = 40.4 bits (93), Expect = 0.003
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 38 PASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHG 81
P S +GPG G GPGPS G PG P + GGAAS G
Sbjct: 258 PRSCSGPGSGSGSGPGPSSG--PGAAPAADKEREAPGGGAASGG 299
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 39.7 bits (91), Expect = 0.005
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 20 TLAPNASSLGPGTDLALAPASSAGPGPGLSLGPGPSFGFSPGPTPTPEPTTSGLAGGAAS 79
T P+ S G T+ + SS GP PGLS GP G S P+ T + GA S
Sbjct: 75 TCTPSLVSRGTQTETEVELKSSPGP-PGLSNGPPAPQGASEEPSGTQSEGGGSSSSGAGS 133
Query: 80 HGPSPFPRPWAP 91
GP RP P
Sbjct: 134 PGPPGILRPLQP 145
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.007
Identities = 29/94 (30%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 22 APNASSLGPGTDLALAPASSAGPGPGL--SLGPGPSFGFSPGPTPTPEPTTS-------- 71
A + S G G P S +GPGPG GPG G PGP P P T
Sbjct: 153 AGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSPC 212
Query: 72 ---GLAGGAASHGPS----PFPRPWAPHALPFWD 98
G A P+ PW P P W+
Sbjct: 213 IPPGFRNLVADRVPNYTSWSQHCPWEPQKQPPWE 246
Score = 38.5 bits (88), Expect = 0.012
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 14 LLRDNYTLAPNASSLGPGTDLALAPA--SSAGPGPGLSLGPGPSFGFSPGPTPTPEPTT- 70
+ +D T ++S+ GP + P SS+G G G G GP G PG P P +
Sbjct: 121 IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
Query: 71 --SGLAGGAASH-GPSPFPRP 88
SG G+ SH GP+ P P
Sbjct: 181 PGSGPGHGSGSHPGPASGPGP 201
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 39.3 bits (90), Expect = 0.007
Identities = 29/94 (30%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 22 APNASSLGPGTDLALAPASSAGPGPGL--SLGPGPSFGFSPGPTPTPEPTTS-------- 71
A + S G G P S +GPGPG GPG G PGP P P T
Sbjct: 153 AGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSPC 212
Query: 72 ---GLAGGAASHGPS----PFPRPWAPHALPFWD 98
G A P+ PW P P W+
Sbjct: 213 IPPGFRNLVADRVPNYTSWSQHCPWEPQKQPPWE 246
Score = 38.5 bits (88), Expect = 0.012
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 14 LLRDNYTLAPNASSLGPGTDLALAPA--SSAGPGPGLSLGPGPSFGFSPGPTPTPEPTT- 70
+ +D T ++S+ GP + P SS+G G G G GP G PG P P +
Sbjct: 121 IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
Query: 71 --SGLAGGAASH-GPSPFPRP 88
SG G+ SH GP+ P P
Sbjct: 181 PGSGPGHGSGSHPGPASGPGP 201
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.140 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,829,490
Number of Sequences: 37866
Number of extensions: 1102608
Number of successful extensions: 9818
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 370
Number of HSP's that attempted gapping in prelim test: 7127
Number of HSP's gapped (non-prelim): 2171
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.