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Search of human proteins with 24308356
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308356 lipase maturation factor 2 [Homo sapiens]
(682 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308356 lipase maturation factor 2 [Homo sapiens] 1405 0.0
gi|115511024 lipase maturation factor 1 [Homo sapiens] 151 2e-36
gi|11072101 rhomboid domain containing 3 [Homo sapiens] 34 0.39
gi|169210554 PREDICTED: FLJ44904 protein [Homo sapiens] 33 0.67
gi|154146199 sal-like 3 [Homo sapiens] 32 1.5
gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H... 32 2.5
gi|49087132 sal-like 2 [Homo sapiens] 31 3.3
gi|41872631 fatty acid synthase [Homo sapiens] 31 4.3
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 31 4.3
gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein... 31 4.3
gi|24431977 XK, Kell blood group complex subunit-related family,... 31 4.3
gi|239756923 PREDICTED: hypothetical protein [Homo sapiens] 30 5.6
gi|239751403 PREDICTED: hypothetical protein XP_002347838 [Homo ... 30 5.6
gi|239745912 PREDICTED: hypothetical protein XP_002343615 [Homo ... 30 5.6
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 30 7.4
gi|239508698 PREDICTED: similar to mucin [Homo sapiens] 30 9.6
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens] 30 9.6
>gi|24308356 lipase maturation factor 2 [Homo sapiens]
Length = 682
Score = 1405 bits (3637), Expect = 0.0
Identities = 682/682 (100%), Positives = 682/682 (100%)
Query: 1 MTCPPTGLYGPEGILPARRTLRPQGKGRWQQLWETPTLLWEAPRLGLDTAQGLELLSLLG 60
MTCPPTGLYGPEGILPARRTLRPQGKGRWQQLWETPTLLWEAPRLGLDTAQGLELLSLLG
Sbjct: 1 MTCPPTGLYGPEGILPARRTLRPQGKGRWQQLWETPTLLWEAPRLGLDTAQGLELLSLLG 60
Query: 61 ALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRP 120
ALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRP
Sbjct: 61 ALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRP 120
Query: 121 ASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYE 180
ASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYE
Sbjct: 121 ASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYE 180
Query: 181 TQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLI 240
TQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLI
Sbjct: 181 TQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLI 240
Query: 241 IITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYG 300
IITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYG
Sbjct: 241 IITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYG 300
Query: 301 LLAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALW 360
LLAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALW
Sbjct: 301 LLAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALW 360
Query: 361 RWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEH 420
RWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEH
Sbjct: 361 RWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEH 420
Query: 421 LQLANSYGLFRRMTGLGGRPEVVLEGSYDGHHWTEIEFMYKPGNLSRPPPVVVPHQPRLD 480
LQLANSYGLFRRMTGLGGRPEVVLEGSYDGHHWTEIEFMYKPGNLSRPPPVVVPHQPRLD
Sbjct: 421 LQLANSYGLFRRMTGLGGRPEVVLEGSYDGHHWTEIEFMYKPGNLSRPPPVVVPHQPRLD 480
Query: 481 WQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYW 540
WQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYW
Sbjct: 481 WQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYW 540
Query: 541 FSQPGEQGQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHW 600
FSQPGEQGQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHW
Sbjct: 541 FSQPGEQGQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHW 600
Query: 601 TRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPLAPVSGEKRRPASQKDSGAA 660
TRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPLAPVSGEKRRPASQKDSGAA
Sbjct: 601 TRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPLAPVSGEKRRPASQKDSGAA 660
Query: 661 SEQATAAPNPCSSSSRTTRRKK 682
SEQATAAPNPCSSSSRTTRRKK
Sbjct: 661 SEQATAAPNPCSSSSRTTRRKK 682
>gi|115511024 lipase maturation factor 1 [Homo sapiens]
Length = 567
Score = 151 bits (381), Expect = 2e-36
Identities = 92/265 (34%), Positives = 138/265 (52%), Gaps = 20/265 (7%)
Query: 8 LYGPEGILPARRTLRP-----QGKGRWQQLWETPTLLWEAPRLGLDTAQGLELLSLLGAL 62
L G G+LP R L+ Q + W+ PT+LW D L+LL+LLG
Sbjct: 78 LIGDRGLLPCRVFLKNFQQYFQDRTSWEVFSYMPTILWLMD--WSDMNSNLDLLALLGLG 135
Query: 63 VALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRPAS 122
++ +L++ + ++ LW Y+S VG V+ F W+S LLETGFL + + PL S
Sbjct: 136 IS-SFVLITGCANMLLMAALWGLYMSLVNVGHVWYSFGWESQLLETGFLGIFLCPLWTLS 194
Query: 123 HRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTS-RCPAWWGLTALTYHYET 181
PQ P + W RWL+FR+M +G++K+ RC W LT + +HYET
Sbjct: 195 R---LPQHT-----PTSRIVLWGFRWLIFRIMLGAGLIKIRGDRC--WRDLTCMDFHYET 244
Query: 182 QCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLII 241
Q +P P A++ HH P W H+ ++ IE+ VP F RR + Q+L Q ++I
Sbjct: 245 QPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLG-RRACIIHGVLQILFQAVLI 303
Query: 242 ITGNYNFFNLMTLVLTTALLDDQHL 266
++GN +F N +T+V + A DD L
Sbjct: 304 VSGNLSFLNWLTMVPSLACFDDATL 328
Score = 100 bits (250), Expect = 3e-21
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 17/156 (10%)
Query: 421 LQLANSYGLFRRMTGLGGRPEVVLEGSYDGHH------WTEIEFMYKPGNLSRPPPVVVP 474
L + N+YG F +T R EV+L+G+ + W + EF KPG+ SR P ++ P
Sbjct: 400 LHIVNTYGAFGSITK--ERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISP 457
Query: 475 HQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPF-HKQPPTYVR 533
+ RLDW MWFAA + H+ W L +LL + L +A PF + PP +VR
Sbjct: 458 YHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSL----LAHNPFAGRPPPRWVR 513
Query: 534 AQRYKYWFSQPG----EQGQWWRRQWVEEFFPSVSL 565
+ Y+Y FS+PG +G+WW R+ + +FP +SL
Sbjct: 514 GEHYRYKFSRPGGRHAAEGKWWVRKRIGAYFPPLSL 549
>gi|11072101 rhomboid domain containing 3 [Homo sapiens]
Length = 386
Score = 34.3 bits (77), Expect = 0.39
Identities = 40/131 (30%), Positives = 49/131 (37%), Gaps = 34/131 (25%)
Query: 42 APRLGLDTAQGLELLSLLGALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQW 101
AP L LD Q LL+ AL LLLS L P + + C +G +
Sbjct: 40 APELLLDPWQVHRLLTHALGHTALPGLLLSLLLLPTV------GWQQECHLGTLRFLHAS 93
Query: 102 DSLLLETGFLAVLVAPLRPAS-------------------HRKEAPQGRQAGALPHEDLP 142
L L +G LAVL+A L +S HR P+G LP
Sbjct: 94 ALLALASGLLAVLLAGLGLSSAAGSCGYMPVHLAMLAGEGHRPRRPRGA---------LP 144
Query: 143 FWLVRWLLFRL 153
WL WLL L
Sbjct: 145 PWLSPWLLLAL 155
>gi|169210554 PREDICTED: FLJ44904 protein [Homo sapiens]
Length = 196
Score = 33.5 bits (75), Expect = 0.67
Identities = 38/129 (29%), Positives = 51/129 (39%), Gaps = 24/129 (18%)
Query: 523 PFHKQPPTYVRAQRYKYWFSQPGEQGQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEK 582
PF ++P AQ W S PG++ + WR P+VS G P Q
Sbjct: 44 PFQEEPQDTENAQSLS-WLSPPGKRARGWRESRGHGPHPTVSAGRP-----------QHS 91
Query: 583 SP-PRTRSANSTLAQAL---HWTRSQLSPLEAPALLWGLLMAVGAVRFV----QALLAPC 634
SP PR + + QAL H R Q+ WG A A F+ QA+ AP
Sbjct: 92 SPSPRHTTRPAAPRQALPGVHPLRRQV----GEETCWGGAQAWAARPFLSLPCQAVPAPT 147
Query: 635 SLRSSPLAP 643
++P P
Sbjct: 148 LTPTTPPDP 156
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 32.3 bits (72), Expect = 1.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 570 LETLLRQFGLQEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLMAVGAVRFVQA 629
+E + Q L ++ PPR + + A SQL L A L ++ GA
Sbjct: 223 IEQIRSQVALMQRPPPRPSLSPAAAPSAPGPAPSQLPGLAA------LPLSAGAP----- 271
Query: 630 LLAPCSLRSSPLAPVSGEKRRPASQKDSGAASEQATAAPNPCSSSS 675
A S P AP + E +P S+ +SGA++ A P+ ++ S
Sbjct: 272 --AAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAAPS 315
>gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo
sapiens]
Length = 1512
Score = 31.6 bits (70), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 622 GAVRFVQALLAPCSLRSSPLAPVSGEKRRPASQKDSGAA 660
G +++ AP S SSP A GEKR PA++ AA
Sbjct: 120 GGAHLTESVAAPDSGASSPAAAEPGEKRAPAAEPSPAAA 158
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 31.2 bits (69), Expect = 3.3
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 581 EKSPPRTR-SANSTLAQALHWTRSQLSPLEAPALLWGLL----MAVGAVRF---VQALLA 632
E +PP + SA S +A++ TR QLS L W LL + G+ F ++ L A
Sbjct: 525 ENTPPGSEGSAISGVAESSTATRMQLSKLVTSLPSWALLTNHFKSTGSFPFPYVLEPLGA 584
Query: 633 PCSLRSSPLAPVSGEKRRPASQKDSGAASEQATAAPNPCSSSS 675
S S V R+ A S A+ T+AP P SS+S
Sbjct: 585 SPSETSKLQQLVEKIDRQGAVAVTSAASGAPTTSAPAPSSSAS 627
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 30.8 bits (68), Expect = 4.3
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 349 ASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEPGTH 404
ASL + LW+ W+ + ++Q+S++G+A L+L + V +++P TH
Sbjct: 1011 ASLEGDSGRLLWK----DNWVSFMDTMLQMSILGSAKHGLYLPTRVTAIHIDPATH 1062
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 30.8 bits (68), Expect = 4.3
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 652 ASQKDSGAASEQATAAPNPCSSSSRTTRRKK 682
A Q+ + E+ATAAP P SS RT +RK+
Sbjct: 165 ADQQRAQDREEEATAAPVPTSSGHRTEKRKR 195
Score = 30.0 bits (66), Expect = 7.4
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Query: 643 PVSGEKRRPASQKDSGA-------ASEQATAAPNPCSSSSRTTRRK 681
P G +R S+ S A E+A AAP P SS RT +RK
Sbjct: 96 PAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRK 141
>gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein)
[Homo sapiens]
Length = 480
Score = 30.8 bits (68), Expect = 4.3
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 16/105 (15%)
Query: 594 LAQALHWTRSQLSPLEAPALLWGLL------MAVGAVRFVQALLAPCSLRSSPL------ 641
L ++ +R +LSP APA+L + RF+QA P + PL
Sbjct: 92 LLDFMYTSRLRLSPATAPAVLAAATYLQMEHVVQACHRFIQASYEPLGISLRPLEAEPPT 151
Query: 642 ---APVSGEKRRPASQKDSGAASEQAT-AAPNPCSSSSRTTRRKK 682
AP G RR D S + P+P S + KK
Sbjct: 152 PPTAPPPGSPRRSEGHPDPPTESRSCSQGPPSPASPDPKACNWKK 196
>gi|24431977 XK, Kell blood group complex subunit-related family,
member 8 [Homo sapiens]
Length = 395
Score = 30.8 bits (68), Expect = 4.3
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 346 LGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEPGTHG 405
LG A+ + +L + LW Q R L A + L+L+G A+VAL L S + G HG
Sbjct: 18 LGTAAFLLDLGTDLWAAVQYALGGRYLWAALVLALLGLASVALQLFSWLWLRADPAGLHG 77
>gi|239756923 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 30.4 bits (67), Expect = 5.6
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 601 TRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPL-----------APVSGEKR 649
T LSP A + LWG A F++ALLA S ++ P G
Sbjct: 34 TAGSLSPYPACSALWGTRQPHDAFGFLRALLARTSAHTAATPNARQHLRAAGVPSPGPPH 93
Query: 650 RPASQKDSGAASEQATAA 667
PA S A + Q +AA
Sbjct: 94 TPAFSAASQAGANQRSAA 111
>gi|239751403 PREDICTED: hypothetical protein XP_002347838 [Homo
sapiens]
Length = 124
Score = 30.4 bits (67), Expect = 5.6
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 601 TRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPL-----------APVSGEKR 649
T LSP A + LWG A F++ALLA S ++ P G
Sbjct: 34 TAGSLSPYPACSALWGTRQPHDAFGFLRALLARTSAHTAATPNARQHLRAAGVPSPGPPH 93
Query: 650 RPASQKDSGAASEQATAA 667
PA S A + Q +AA
Sbjct: 94 TPAFSAASQAGANQRSAA 111
>gi|239745912 PREDICTED: hypothetical protein XP_002343615 [Homo
sapiens]
Length = 124
Score = 30.4 bits (67), Expect = 5.6
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 601 TRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPL-----------APVSGEKR 649
T LSP A + LWG A F++ALLA S ++ P G
Sbjct: 34 TAGSLSPYPACSALWGTRQPHDAFGFLRALLARTSAHTAATPNARQHLRAAGVPSPGPPH 93
Query: 650 RPASQKDSGAASEQATAA 667
PA S A + Q +AA
Sbjct: 94 TPAFSAASQAGANQRSAA 111
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 30.0 bits (66), Expect = 7.4
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 638 SSPLAPVSGEKRRP--------ASQKDSGAASEQATAAPNPCSSSSRTTRRKK 682
SSP A G + R A Q+ + E+A AAP P SS RT +RK+
Sbjct: 55 SSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKR 107
Score = 29.6 bits (65), Expect = 9.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 652 ASQKDSGAASEQATAAPNPCSSSSRTTRRKK 682
A Q+ + E+A AAP P SS RT +RK+
Sbjct: 289 ADQQGAQDREEEAAAAPAPTSSGHRTEKRKR 319
>gi|239508698 PREDICTED: similar to mucin [Homo sapiens]
Length = 265
Score = 29.6 bits (65), Expect = 9.6
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 638 SSPLAPVSGEKRRP--------ASQKDSGAASEQATAAPNPCSSSSRTTRRK 681
SSP A G + R A Q+ + E+A AAP P SS RT +RK
Sbjct: 55 SSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAPTSSGHRTEKRK 106
>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
Length = 1088
Score = 29.6 bits (65), Expect = 9.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 635 SLRSSPLAPVSGEKRRPASQKDSGAA-SEQATAAPNPCSSSSRTTRRKK 682
SLR+ P P G+K R +++ D G +Q +P P +SR +++
Sbjct: 543 SLRAGPNEPEGGDKSRKSAKGDKGGKDKKQIQTSPVPVRKNSRDEEKRE 591
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,686,416
Number of Sequences: 37866
Number of extensions: 1346986
Number of successful extensions: 4781
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4751
Number of HSP's gapped (non-prelim): 32
length of query: 682
length of database: 18,247,518
effective HSP length: 109
effective length of query: 573
effective length of database: 14,120,124
effective search space: 8090831052
effective search space used: 8090831052
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Table of Contents |
Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.