Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 11967975
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11967975 myeloid leukemia factor 1 isoform 1 [Homo sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11967975 myeloid leukemia factor 1 isoform 1 [Homo sapiens] 546 e-156
gi|194328680 myeloid leukemia factor 1 isoform 2 [Homo sapiens] 496 e-141
gi|194328678 myeloid leukemia factor 1 isoform 2 [Homo sapiens] 496 e-141
gi|4885487 myeloid leukemia factor 2 [Homo sapiens] 154 6e-38
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 34 0.12
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 34 0.12
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 34 0.12
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 34 0.12
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 32 0.45
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 32 0.45
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 31 0.99
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 30 1.7
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 30 2.2
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 30 2.2
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 30 2.2
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 30 2.9
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 30 2.9
gi|13236587 transmembrane protein 43 [Homo sapiens] 30 2.9
gi|47578107 delangin isoform B [Homo sapiens] 30 2.9
gi|47578105 delangin isoform A [Homo sapiens] 30 2.9
gi|213385270 RAS guanyl releasing protein 3 (calcium and DAG-reg... 29 3.8
gi|24762239 RAS guanyl releasing protein 3 (calcium and DAG-regu... 29 3.8
gi|7662334 RAS guanyl releasing protein 3 (calcium and DAG-regul... 29 3.8
gi|54112121 splicing factor 3b, subunit 3 [Homo sapiens] 29 4.9
gi|222352143 TBC1 domain family, member 2 [Homo sapiens] 29 4.9
gi|224586804 DNA-directed DNA polymerase epsilon 3 [Homo sapiens] 29 4.9
gi|21361891 SH2 domain containing 4A [Homo sapiens] 29 4.9
gi|154354966 inner membrane protein, mitochondrial isoform 3 [Ho... 29 4.9
gi|154354962 inner membrane protein, mitochondrial isoform 2 [Ho... 29 4.9
gi|154354964 inner membrane protein, mitochondrial isoform 1 [Ho... 29 4.9
>gi|11967975 myeloid leukemia factor 1 isoform 1 [Homo sapiens]
Length = 268
Score = 546 bits (1408), Expect = e-156
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MFRMLNSSFEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDG 60
MFRMLNSSFEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDG
Sbjct: 1 MFRMLNSSFEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDG 60
Query: 61 EDSLTHTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEP 120
EDSLTHTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEP
Sbjct: 61 EDSLTHTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEP 120
Query: 121 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 180
PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV
Sbjct: 121 PKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEV 180
Query: 181 NQEFINMNESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQS 240
NQEFINMNESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQS
Sbjct: 181 NQEFINMNESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQS 240
Query: 241 PAIEHGRRSNVLGDKLHIKGSSVKSNKK 268
PAIEHGRRSNVLGDKLHIKGSSVKSNKK
Sbjct: 241 PAIEHGRRSNVLGDKLHIKGSSVKSNKK 268
>gi|194328680 myeloid leukemia factor 1 isoform 2 [Homo sapiens]
Length = 243
Score = 496 bits (1278), Expect = e-141
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 26 MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY 85
MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY
Sbjct: 1 MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY 60
Query: 86 MQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMR 145
MQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMR
Sbjct: 61 MQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMR 120
Query: 146 DSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLK 205
DSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLK
Sbjct: 121 DSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLK 180
Query: 206 YKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKS 265
YKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKS
Sbjct: 181 YKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKS 240
Query: 266 NKK 268
NKK
Sbjct: 241 NKK 243
>gi|194328678 myeloid leukemia factor 1 isoform 2 [Homo sapiens]
Length = 243
Score = 496 bits (1278), Expect = e-141
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 26 MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY 85
MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY
Sbjct: 1 MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY 60
Query: 86 MQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMR 145
MQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMR
Sbjct: 61 MQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMR 120
Query: 146 DSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLK 205
DSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLK
Sbjct: 121 DSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLK 180
Query: 206 YKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKS 265
YKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKS
Sbjct: 181 YKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKS 240
Query: 266 NKK 268
NKK
Sbjct: 241 NKK 243
>gi|4885487 myeloid leukemia factor 2 [Homo sapiens]
Length = 248
Score = 154 bits (390), Expect = 6e-38
Identities = 95/259 (36%), Positives = 146/259 (56%), Gaps = 40/259 (15%)
Query: 1 MFRMLNSSFEDDPFF-SESILAHRENMRQMIRSFSEPFGRD-LLSISDGR---GRAHNRR 55
MFR + +DP F + HR++M +M+ S FG LSI+DG R +RR
Sbjct: 1 MFRFMRDVEPEDPMFLMDPFAIHRQHMSRML---SGGFGYSPFLSITDGNMPGTRPASRR 57
Query: 56 GHNDGEDS------LTHTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSVDPNGHSFCSSS 109
G S ++ + F M+ M+ NM + ++ N +F SS+
Sbjct: 58 MQQAGAVSPFGMLGMSGGFMDMFGMMNDMIGNMEH-----------MTAGGNCQTFSSST 106
Query: 110 VMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKK 169
V++YS GD PKV+Q +++ R APGGI+ETR+ +RDSDSGLE+M+IGHHI DRAH++++
Sbjct: 107 VISYSNTGDGAPKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQR 166
Query: 170 SKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLKYKP---------------GRHNLG 214
S+N +TGD+E Q++IN++ES+A AFD+EW+ E +++ GR G
Sbjct: 167 SRNHRTGDQEERQDYINLDESEAAAFDDEWRRETSRFRQQRPLEFRRLESSGAGGRRAEG 226
Query: 215 NTRMRSVGHENPGSRELKR 233
R+ G E+ SR+ +R
Sbjct: 227 PPRLAIQGPEDSPSRQSRR 245
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 34.3 bits (77), Expect = 0.12
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 152 EKMAIGHHIHDRAHVIKKSKNK-------KTGDEEVNQEFINMNESDAHAFDEEWQSEVL 204
E + +G ++ + K + K K G E + M +SD A E + +
Sbjct: 2547 EDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLARMEKSDNCAELSEATDDAI 2606
Query: 205 KYKPGRHNLGNTRMR-------------SVGHENPGSRELKRREKPQQSPAIEHGRRSNV 251
K + N+G++ ++ SVG +P S E+KR Q+ ++ RS+
Sbjct: 2607 SNKYDKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASEEMKR-----QNGRLKMADRSSP 2661
Query: 252 LGDKLHIKGSSVKSN 266
G L K S+V +
Sbjct: 2662 QGRPLQAKQSAVSQS 2676
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.3 bits (77), Expect = 0.12
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 152 EKMAIGHHIHDRAHVIKKSKNK-------KTGDEEVNQEFINMNESDAHAFDEEWQSEVL 204
E + +G ++ + K + K K G E + M +SD A E + +
Sbjct: 2476 EDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLARMEKSDNCAELSEATDDAI 2535
Query: 205 KYKPGRHNLGNTRMR-------------SVGHENPGSRELKRREKPQQSPAIEHGRRSNV 251
K + N+G++ ++ SVG +P S E+KR Q+ ++ RS+
Sbjct: 2536 SNKYDKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASEEMKR-----QNGRLKMADRSSP 2590
Query: 252 LGDKLHIKGSSVKSN 266
G L K S+V +
Sbjct: 2591 QGRPLQAKQSAVSQS 2605
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.3 bits (77), Expect = 0.12
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 152 EKMAIGHHIHDRAHVIKKSKNK-------KTGDEEVNQEFINMNESDAHAFDEEWQSEVL 204
E + +G ++ + K + K K G E + M +SD A E + +
Sbjct: 2476 EDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLARMEKSDNCAELSEATDDAI 2535
Query: 205 KYKPGRHNLGNTRMR-------------SVGHENPGSRELKRREKPQQSPAIEHGRRSNV 251
K + N+G++ ++ SVG +P S E+KR Q+ ++ RS+
Sbjct: 2536 SNKYDKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASEEMKR-----QNGRLKMADRSSP 2590
Query: 252 LGDKLHIKGSSVKSN 266
G L K S+V +
Sbjct: 2591 QGRPLQAKQSAVSQS 2605
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 34.3 bits (77), Expect = 0.12
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 152 EKMAIGHHIHDRAHVIKKSKNK-------KTGDEEVNQEFINMNESDAHAFDEEWQSEVL 204
E + +G ++ + K + K K G E + M +SD A E + +
Sbjct: 2476 EDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLARMEKSDNCAELSEATDDAI 2535
Query: 205 KYKPGRHNLGNTRMR-------------SVGHENPGSRELKRREKPQQSPAIEHGRRSNV 251
K + N+G++ ++ SVG +P S E+KR Q+ ++ RS+
Sbjct: 2536 SNKYDKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASEEMKR-----QNGRLKMADRSSP 2590
Query: 252 LGDKLHIKGSSVKSN 266
G L K S+V +
Sbjct: 2591 QGRPLQAKQSAVSQS 2605
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 32.3 bits (72), Expect = 0.45
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 96 LSVDPNGHSF-------------CSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRK 142
+S + NGHSF SS V+ + PP QAS + P +K++ K
Sbjct: 139 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK 198
Query: 143 AMRDSD--SGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEE 198
+ D + LEK G + + + K T + N+N+ H +++E
Sbjct: 199 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQE 256
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 32.3 bits (72), Expect = 0.45
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 96 LSVDPNGHSF-------------CSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRK 142
+S + NGHSF SS V+ + PP QAS + P +K++ K
Sbjct: 181 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK 240
Query: 143 AMRDSD--SGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAHAFDEE 198
+ D + LEK G + + + K T + N+N+ H +++E
Sbjct: 241 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQE 298
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 31.2 bits (69), Expect = 0.99
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 199 WQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHI 258
W++ + + +P RH N R R+ G +P +R + E+P S + GR + G +L
Sbjct: 38 WEAALPRRRPRRHPSVNPRSRAAG--SPRTRGRRTEERPSGSRLGDRGRGRALPGGRLGG 95
Query: 259 KG 260
+G
Sbjct: 96 RG 97
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 30.4 bits (67), Expect = 1.7
Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 30/205 (14%)
Query: 54 RRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSVDPNGHSFCSSSVMTY 113
+R +D E +LT + T + V N+ M LE N +L+ + S + T
Sbjct: 955 KRDIDDLELTLTKVEKEKHAT-ENKVKNLSEEMTALEENISKLTKEKK--SLQEAHQQTL 1011
Query: 114 SKIGDEPPKV-------FQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHV 166
+ E KV + QT G +++ +K D
Sbjct: 1012 DDLQVEEDKVNGLIKINAKLEQQTDDLEGSLEQEKKLRAD-------------------- 1051
Query: 167 IKKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENP 226
++++K K GD +++QE I E+D +E+ + + + + + + ++ S+ +
Sbjct: 1052 LERAKRKLEGDLKMSQESIMDLENDKQQIEEKLKKKEFELSQLQAKIDDEQVHSLQFQKK 1111
Query: 227 GSRELKRREKPQQSPAIEHGRRSNV 251
R E+ ++ EH R+ +
Sbjct: 1112 IKELQARIEELEEEIEAEHTLRAKI 1136
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 30.0 bits (66), Expect = 2.2
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 20/210 (9%)
Query: 5 LNSSFEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSL 64
+ S E + F +S+ + E + + + +S+ L + R +++
Sbjct: 467 IKSITEINANFEKSVRLNEEMITKKVAQYSQ----QLNDLKAENARLNSKLEKEKHNKER 522
Query: 65 THTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSV----DPNGHSFCSSSVMTYSKIGDE- 119
+V S + + + + Y + LER +L + D + H S++ S++ D+
Sbjct: 523 LEAEVESLHS--NLATAINEYNEILERKDLELVLWRADDVSRHETMGSNI---SQLTDKN 577
Query: 120 ---PPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKN-KKT 175
+V +A + G ++ETR A+R+ LE + + + H IK+ K
Sbjct: 578 ELLTEQVHKARVKFNTLKGKLRETRDALREKTLALESVQL--DLKQAQHRIKEMKQMHPN 635
Query: 176 GDEEVNQEFINMNESDAHAFDEEWQSEVLK 205
G+ + +Q N S+ E ++ +L+
Sbjct: 636 GEAKESQSIGKQNSSEERIRQRELENLLLE 665
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 30.0 bits (66), Expect = 2.2
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 20/210 (9%)
Query: 5 LNSSFEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSL 64
+ S E + F +S+ + E + + + +S+ L + R +++
Sbjct: 496 IKSITEINANFEKSVRLNEEMITKKVAQYSQ----QLNDLKAENARLNSKLEKEKHNKER 551
Query: 65 THTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSV----DPNGHSFCSSSVMTYSKIGDE- 119
+V S + + + + Y + LER +L + D + H S++ S++ D+
Sbjct: 552 LEAEVESLHS--NLATAINEYNEILERKDLELVLWRADDVSRHETMGSNI---SQLTDKN 606
Query: 120 ---PPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKN-KKT 175
+V +A + G ++ETR A+R+ LE + + + H IK+ K
Sbjct: 607 ELLTEQVHKARVKFNTLKGKLRETRDALREKTLALESVQL--DLKQAQHRIKEMKQMHPN 664
Query: 176 GDEEVNQEFINMNESDAHAFDEEWQSEVLK 205
G+ + +Q N S+ E ++ +L+
Sbjct: 665 GEAKESQSIGKQNSSEERIRQRELENLLLE 694
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 30.0 bits (66), Expect = 2.2
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 20/210 (9%)
Query: 5 LNSSFEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSL 64
+ S E + F +S+ + E + + + +S+ L + R +++
Sbjct: 496 IKSITEINANFEKSVRLNEEMITKKVAQYSQ----QLNDLKAENARLNSKLEKEKHNKER 551
Query: 65 THTDVSSFQTMDQMVSNMRNYMQKLERNFGQLSV----DPNGHSFCSSSVMTYSKIGDE- 119
+V S + + + + Y + LER +L + D + H S++ S++ D+
Sbjct: 552 LEAEVESLHS--NLATAINEYNEILERKDLELVLWRADDVSRHETMGSNI---SQLTDKN 606
Query: 120 ---PPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKN-KKT 175
+V +A + G ++ETR A+R+ LE + + + H IK+ K
Sbjct: 607 ELLTEQVHKARVKFNTLKGKLRETRDALREKTLALESVQL--DLKQAQHRIKEMKQMHPN 664
Query: 176 GDEEVNQEFINMNESDAHAFDEEWQSEVLK 205
G+ + +Q N S+ E ++ +L+
Sbjct: 665 GEAKESQSIGKQNSSEERIRQRELENLLLE 694
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 29.6 bits (65), Expect = 2.9
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 22/183 (12%)
Query: 91 RNFGQLSVDPNGHSFC----SSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMRD 146
+++GQ+ + S+ SS V +Y+ QAST++R P ++R R
Sbjct: 243 KSYGQMIIPSREKSYSPTEMSSRVKSYN----------QASTRSR--PQSHSQSRSPRR- 289
Query: 147 SDSGLEKMAIGHHIHDRAHVIKK--SKNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVL 204
S SG +K H R+H K+ S+ + + + + ++S +H+ +
Sbjct: 290 SRSGSQKRT---HSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRT 346
Query: 205 KYKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRRSNVLGDKLHIKGSSVK 264
+ HN + H + S +R + SP E GR + +K S
Sbjct: 347 PRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRS 406
Query: 265 SNK 267
NK
Sbjct: 407 PNK 409
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 29.6 bits (65), Expect = 2.9
Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 6/151 (3%)
Query: 9 FEDDPFFSESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTD 68
+ DD ES EN R FS+ F D + R R + +R N EDS +
Sbjct: 1171 YSDDDEEEES----EENSRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSESDGS 1226
Query: 69 VSSFQTMDQMVSNMRNYMQKLERNFGQLSVDPNGHSFCSSSVMTYSKIGDEPPKVFQAST 128
S + ++ + + E LS + S + K G + +A
Sbjct: 1227 QKSLRRGKEIRRVHKRRLSSSESEESYLSKNSEDDELAKESKRSVRKRGRSTDEYSEADE 1286
Query: 129 QTRRAPGGIKETRKAMRDSDSGLEKMAIGHH 159
+ G K +RK + ++ E+ H
Sbjct: 1287 EEEEEEG--KPSRKRLHRIETDEEESCDNAH 1315
>gi|13236587 transmembrane protein 43 [Homo sapiens]
Length = 400
Score = 29.6 bits (65), Expect = 2.9
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 17/95 (17%)
Query: 136 GIKETRKAMRDSDSGLEKMAIG--HHIHDRAHVIKKSKNKKTGDEEVNQEFINMNESDAH 193
G T K + D + G+ A+ H+ V + + T D +V +E +
Sbjct: 93 GALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKE-------TRY 145
Query: 194 AFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGS 228
+++ EW+SE++ K R +GH+NP +
Sbjct: 146 SYNTEWRSEIINSK--------NFDREIGHKNPSA 172
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 29.6 bits (65), Expect = 2.9
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
Query: 118 DEPPKVFQASTQTRRAPGGIKETR----KAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNK 173
++ P+V + T+ +K R K D S E + H ++ +S+
Sbjct: 774 EKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERH 833
Query: 174 KTGDEEVNQ-EFINMNESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELK 232
+ V + E + + + H + + RH G++R E P S E K
Sbjct: 834 RGDQSRVRRPETLRSSSRNEHGIKSDSSKTDKLERKHRHESGDSR------ERPSSGEQK 887
Query: 233 RREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKSNKK 268
R SP ++ G + DKL K + K +K+
Sbjct: 888 SRP---DSPRVKQGDSNKSRSDKLGFKSPTSKDDKR 920
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 29.6 bits (65), Expect = 2.9
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
Query: 118 DEPPKVFQASTQTRRAPGGIKETR----KAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNK 173
++ P+V + T+ +K R K D S E + H ++ +S+
Sbjct: 774 EKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERH 833
Query: 174 KTGDEEVNQ-EFINMNESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELK 232
+ V + E + + + H + + RH G++R E P S E K
Sbjct: 834 RGDQSRVRRPETLRSSSRNEHGIKSDSSKTDKLERKHRHESGDSR------ERPSSGEQK 887
Query: 233 RREKPQQSPAIEHGRRSNVLGDKLHIKGSSVKSNKK 268
R SP ++ G + DKL K + K +K+
Sbjct: 888 SRP---DSPRVKQGDSNKSRSDKLGFKSPTSKDDKR 920
>gi|213385270 RAS guanyl releasing protein 3 (calcium and
DAG-regulated) isoform 1 [Homo sapiens]
Length = 690
Score = 29.3 bits (64), Expect = 3.8
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 73 QTMDQMVSNMRNYMQKLE--RNFGQLSVDPNG--HSFCSSSVMTYSKIGDEPPKVFQAST 128
Q ++++ N +KL +NF L G HS S T+S + E K + T
Sbjct: 216 QQRAEVITKFINVAKKLLQLKNFNTLMAVVGGLSHSSISRLKETHSHLSSEVTKNWNEMT 275
Query: 129 QTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHD--RAHVI 167
+ + G RKA D D G + +G H+ D HVI
Sbjct: 276 ELVSSNGNYCNYRKAFADCD-GFKIPILGVHLKDLIAVHVI 315
>gi|24762239 RAS guanyl releasing protein 3 (calcium and
DAG-regulated) isoform 1 [Homo sapiens]
Length = 690
Score = 29.3 bits (64), Expect = 3.8
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 73 QTMDQMVSNMRNYMQKLE--RNFGQLSVDPNG--HSFCSSSVMTYSKIGDEPPKVFQAST 128
Q ++++ N +KL +NF L G HS S T+S + E K + T
Sbjct: 216 QQRAEVITKFINVAKKLLQLKNFNTLMAVVGGLSHSSISRLKETHSHLSSEVTKNWNEMT 275
Query: 129 QTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHD--RAHVI 167
+ + G RKA D D G + +G H+ D HVI
Sbjct: 276 ELVSSNGNYCNYRKAFADCD-GFKIPILGVHLKDLIAVHVI 315
>gi|7662334 RAS guanyl releasing protein 3 (calcium and
DAG-regulated) isoform 2 [Homo sapiens]
Length = 689
Score = 29.3 bits (64), Expect = 3.8
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 73 QTMDQMVSNMRNYMQKLE--RNFGQLSVDPNG--HSFCSSSVMTYSKIGDEPPKVFQAST 128
Q ++++ N +KL +NF L G HS S T+S + E K + T
Sbjct: 216 QQRAEVITKFINVAKKLLQLKNFNTLMAVVGGLSHSSISRLKETHSHLSSEVTKNWNEMT 275
Query: 129 QTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHD--RAHVI 167
+ + G RKA D D G + +G H+ D HVI
Sbjct: 276 ELVSSNGNYCNYRKAFADCD-GFKIPILGVHLKDLIAVHVI 315
>gi|54112121 splicing factor 3b, subunit 3 [Homo sapiens]
Length = 1217
Score = 28.9 bits (63), Expect = 4.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 60 GEDSLTHTDVSSFQTMDQMVSNM-RNYMQKLERNFGQL------SVDPNGHSFCSSSVMT 112
GE + +F +D ++++ R Y + LE + L S P+G CS + +T
Sbjct: 198 GEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSENYIT 257
Query: 113 YSKIGDEP 120
Y GD+P
Sbjct: 258 YKNFGDQP 265
>gi|222352143 TBC1 domain family, member 2 [Homo sapiens]
Length = 917
Score = 28.9 bits (63), Expect = 4.9
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 211 HNL-GNTRMRSVGHENPG-----SRELKRREKPQQSPAIEHGR 247
HN+ GN + + GHE PG S E +R E+P S A GR
Sbjct: 220 HNIRGNKQAQGTGHEPPGEDSPQSGEPQREEQPLASDASTPGR 262
>gi|224586804 DNA-directed DNA polymerase epsilon 3 [Homo sapiens]
Length = 147
Score = 28.9 bits (63), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 168 KKSKNKKTGDEEVNQEFINMNESDAHAFDEEWQSE 202
KK K+KKT EE ++ N+ D +EE Q+E
Sbjct: 107 KKDKDKKTDSEEQDKSRDEDNDEDEERLEEEEQNE 141
>gi|21361891 SH2 domain containing 4A [Homo sapiens]
Length = 454
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 130 TRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVI--KKSKNKKTGDEEVNQEFINM 187
+R AP +E +++ S +++M +A+ KK KK DEE+NQ
Sbjct: 159 SRPAPTLEEEKIRSLSSSSRNIQQMLADSINRMKAYAFHQKKESMKKKQDEEINQIEEER 218
Query: 188 NESDAHAF--DEEWQSEVLKYK 207
+ ++ D EWQ+ + K K
Sbjct: 219 TKQICKSWKEDSEWQASLRKSK 240
>gi|154354966 inner membrane protein, mitochondrial isoform 3 [Homo
sapiens]
Length = 747
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 101 NGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHI 160
N HS + M S+I E + S Q R G +KE RKA+ ++ L K +
Sbjct: 239 NAHSNILKAAMDNSEIAGE-----KKSAQWRTVEGALKERRKAVDEAADALLKAK--EEL 291
Query: 161 HDRAHVIKKSKNKK 174
VI+ +K K+
Sbjct: 292 EKMKSVIENAKKKE 305
>gi|154354962 inner membrane protein, mitochondrial isoform 2 [Homo
sapiens]
Length = 757
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 101 NGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHI 160
N HS + M S+I E + S Q R G +KE RKA+ ++ L K +
Sbjct: 249 NAHSNILKAAMDNSEIAGE-----KKSAQWRTVEGALKERRKAVDEAADALLKAK--EEL 301
Query: 161 HDRAHVIKKSKNKK 174
VI+ +K K+
Sbjct: 302 EKMKSVIENAKKKE 315
>gi|154354964 inner membrane protein, mitochondrial isoform 1 [Homo
sapiens]
Length = 758
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 101 NGHSFCSSSVMTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHI 160
N HS + M S+I E + S Q R G +KE RKA+ ++ L K +
Sbjct: 250 NAHSNILKAAMDNSEIAGE-----KKSAQWRTVEGALKERRKAVDEAADALLKAK--EEL 302
Query: 161 HDRAHVIKKSKNKK 174
VI+ +K K+
Sbjct: 303 EKMKSVIENAKKKE 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,594,451
Number of Sequences: 37866
Number of extensions: 478200
Number of successful extensions: 1182
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1161
Number of HSP's gapped (non-prelim): 53
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.