Search of human proteins with 119395720

Search of human proteins with 119395720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|119395720 cytoplasmic polyadenylation element binding
protein 1 isoform 3 [Homo sapiens]
         (486 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|119395725 cytoplasmic polyadenylation element binding protein...  1005   0.0  
gi|119395722 cytoplasmic polyadenylation element binding protein...  1005   0.0  
gi|119395720 cytoplasmic polyadenylation element binding protein...  1005   0.0  
gi|119395718 cytoplasmic polyadenylation element binding protein...   999   0.0  
gi|50345881 cytoplasmic polyadenylation element binding protein ...   214   1e-55
gi|189027090 cytoplasmic polyadenylation element binding protein...   214   1e-55
gi|33188439 cytoplasmic polyadenylation element binding protein ...   214   2e-55
gi|33188441 cytoplasmic polyadenylation element binding protein ...   214   2e-55
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          37   0.053
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          37   0.053
gi|4505255 musashi 1 [Homo sapiens]                                    34   0.26 
gi|150378498 fragile site-associated protein [Homo sapiens]            34   0.26 
gi|50053795 eukaryotic translation initiation factor 4B [Homo sa...    34   0.26 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        34   0.34 
gi|21450675 RNA binding motif protein 46 [Homo sapiens]                33   0.45 
gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]      33   0.45 
gi|205277471 cochlin precursor [Homo sapiens]                          33   0.58 
gi|4758022 cochlin precursor [Homo sapiens]                            33   0.58 
gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]     33   0.58 
gi|148833511 RNA binding motif protein 47 isoform b [Homo sapiens]     33   0.58 
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                33   0.76 
gi|24431975 hypothetical protein LOC26148 [Homo sapiens]               32   0.99 
gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform ...    32   0.99 
gi|55956919 heterogeneous nuclear ribonucleoprotein A/B isoform ...    32   0.99 
gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo...    32   1.3  
gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]                  32   1.3  
gi|133922582 zinc finger protein 358 [Homo sapiens]                    32   1.3  
gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]              32   1.7  
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi...    32   1.7  
gi|7661798 postsynaptic protein CRIPT [Homo sapiens]                   32   1.7  

>gi|119395725 cytoplasmic polyadenylation element binding protein 1
           isoform 1 [Homo sapiens]
          Length = 561

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 76  MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 135

Query: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 136 GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 195

Query: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 196 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 255

Query: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 256 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 315

Query: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS
Sbjct: 316 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 375

Query: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360
           HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM
Sbjct: 376 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 435

Query: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420
           LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
Sbjct: 436 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 495

Query: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480
           TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ
Sbjct: 496 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 555

Query: 481 KNRDSS 486
           KNRDSS
Sbjct: 556 KNRDSS 561


>gi|119395722 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60

Query: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120

Query: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180

Query: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240

Query: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS
Sbjct: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300

Query: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360
           HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM
Sbjct: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360

Query: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420
           LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
Sbjct: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420

Query: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480
           TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ
Sbjct: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480

Query: 481 KNRDSS 486
           KNRDSS
Sbjct: 481 KNRDSS 486


>gi|119395720 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60

Query: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120

Query: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180

Query: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240

Query: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS
Sbjct: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACS 300

Query: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360
           HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM
Sbjct: 301 HDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGM 360

Query: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420
           LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
Sbjct: 361 LNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF 420

Query: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480
           TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ
Sbjct: 421 TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQ 480

Query: 481 KNRDSS 486
           KNRDSS
Sbjct: 481 KNRDSS 486


>gi|119395718 cytoplasmic polyadenylation element binding protein 1
           isoform 2 [Homo sapiens]
          Length = 491

 Score =  999 bits (2583), Expect = 0.0
 Identities = 486/491 (98%), Positives = 486/491 (98%), Gaps = 5/491 (1%)

Query: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60
           MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL
Sbjct: 1   MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL 60

Query: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120
           GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS
Sbjct: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGS 120

Query: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180
           DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP
Sbjct: 121 DHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWP 180

Query: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240
           GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL
Sbjct: 181 GASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFL 240

Query: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP-----PKGYVYLVFELEKSVRSL 295
           GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP     PKGYVYLVFELEKSVRSL
Sbjct: 241 GGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFELEKSVRSL 300

Query: 296 LQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVG 355
           LQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVG
Sbjct: 301 LQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVG 360

Query: 356 ALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEI 415
           ALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEI
Sbjct: 361 ALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEI 420

Query: 416 KTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSP 475
           KTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSP
Sbjct: 421 KTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSP 480

Query: 476 LMRNQKNRDSS 486
           LMRNQKNRDSS
Sbjct: 481 LMRNQKNRDSS 491


>gi|50345881 cytoplasmic polyadenylation element binding protein 3
           [Homo sapiens]
          Length = 698

 Score =  214 bits (546), Expect = 1e-55
 Identities = 115/257 (44%), Positives = 159/257 (61%), Gaps = 13/257 (5%)

Query: 234 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 293
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 439 YSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQ 498

Query: 294 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 353
           +L+ AC    L  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 499 ALIDAC----LEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 552

Query: 354 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 412
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 553 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 612

Query: 413 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 466
           V+++     K+V++ PY L+D +C       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 613 VQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHS 672

Query: 467 MEGLRHHSPLMRNQKNR 483
             G   H PL++   +R
Sbjct: 673 RAGREFHKPLVKEGGDR 689


>gi|189027090 cytoplasmic polyadenylation element binding protein 4
           [Homo sapiens]
          Length = 729

 Score =  214 bits (545), Expect = 1e-55
 Identities = 115/257 (44%), Positives = 160/257 (62%), Gaps = 13/257 (5%)

Query: 234 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 293
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 470 YSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQ 529

Query: 294 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 353
           +L+ AC    +  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 530 ALIDAC----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 583

Query: 354 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 412
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 584 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 643

Query: 413 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 466
           V+++  +  K+V++ PY L+D LC       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 644 VQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHS 703

Query: 467 MEGLRHHSPLMRNQKNR 483
             G   H PL++   +R
Sbjct: 704 RAGREFHKPLVKEGGDR 720


>gi|33188439 cytoplasmic polyadenylation element binding protein 2
           isoform B [Homo sapiens]
          Length = 589

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 209 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 268
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 308 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 364

Query: 269 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 328
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 365 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 418

Query: 329 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 387
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 419 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 478

Query: 388 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 441
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 479 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 538

Query: 442 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 483
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 539 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580


>gi|33188441 cytoplasmic polyadenylation element binding protein 2
           isoform A [Homo sapiens]
          Length = 559

 Score =  214 bits (544), Expect = 2e-55
 Identities = 119/282 (42%), Positives = 168/282 (59%), Gaps = 16/282 (5%)

Query: 209 QAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPG 268
           Q   +N  TC  + Q   R  +   +S KVF+GG+P DI E  +  +FR FG L V+WP 
Sbjct: 278 QVGVLNSPTCYSAHQNGERIER---FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPH 334

Query: 269 KDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQV 328
           K       PPKGY +L+F+ E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+
Sbjct: 335 KAESKSYFPPKGYAFLLFQEESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQI 388

Query: 329 IPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH- 387
            PW L+DS+FV   SQ LDP +T+FVG +   L A  LA I++ L+GGV YAGIDTD   
Sbjct: 389 RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL 448

Query: 388 KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQ 441
           KYP G+GRV F+NQ+SY+ A+SA FV+++     K+V++ PY L+D +C       C  +
Sbjct: 449 KYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGK 508

Query: 442 PGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNR 483
             PFFC +  C +Y+C  CW   HS  G   H PL++   +R
Sbjct: 509 FAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 550


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 235 SCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRS 294
           S K+F+GG+P +  E  L   F+ FG ++      D +  R  P+G+ ++ FE E+SV  
Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR--PRGFGFITFEDEQSVDQ 169

Query: 295 LLQACSHD 302
            +    HD
Sbjct: 170 AVNMHFHD 177



 Score = 33.5 bits (75), Expect = 0.45
 Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 31/197 (15%)

Query: 237 KVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLL 296
           K+F+GG+ W  T+  L + F  +G +      KD    +   +G+ ++ F+    V ++L
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQ--SRGFGFVKFKDPNCVGTVL 68

Query: 297 QACSH---------DPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLD 347
            +  H          P +P G       M   R R KE            + + P     
Sbjct: 69  ASRPHTLDGRNIDPKPCTPRG-------MQPERTRPKE-----------GWQKGPRSDNS 110

Query: 348 PSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKY-PIGSGRVTFNNQRSYLK 406
            S  +FVG +        L       FG V    +  D  K  P G G +TF +++S  +
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169

Query: 407 AVSAAFVEIKTTKFTKK 423
           AV+  F +I   K   K
Sbjct: 170 AVNMHFHDIMGKKVEVK 186


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 235 SCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRS 294
           S K+F+GG+P +  E  L   F+ FG ++      D +  R  P+G+ ++ FE E+SV  
Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR--PRGFGFITFEDEQSVDQ 169

Query: 295 LLQACSHD 302
            +    HD
Sbjct: 170 AVNMHFHD 177



 Score = 33.5 bits (75), Expect = 0.45
 Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 31/197 (15%)

Query: 237 KVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLL 296
           K+F+GG+ W  T+  L + F  +G +      KD    +   +G+ ++ F+    V ++L
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQ--SRGFGFVKFKDPNCVGTVL 68

Query: 297 QACSH---------DPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLD 347
            +  H          P +P G       M   R R KE            + + P     
Sbjct: 69  ASRPHTLDGRNIDPKPCTPRG-------MQPERTRPKE-----------GWQKGPRSDNS 110

Query: 348 PSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKY-PIGSGRVTFNNQRSYLK 406
            S  +FVG +        L       FG V    +  D  K  P G G +TF +++S  +
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169

Query: 407 AVSAAFVEIKTTKFTKK 423
           AV+  F +I   K   K
Sbjct: 170 AVNMHFHDIMGKKVEVK 186


>gi|4505255 musashi 1 [Homo sapiens]
          Length = 362

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 231 NPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEK 290
           +P   CK+F+GG+ W  T+ GL   F  FG +      +D    R   +G+ ++ F  + 
Sbjct: 15  SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKR--SRGFGFVTFMDQA 72

Query: 291 SVRSLLQACSHD 302
            V  +L    H+
Sbjct: 73  GVDKVLAQSRHE 84


>gi|150378498 fragile site-associated protein [Homo sapiens]
          Length = 5005

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 244 PWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDP 303
           PWDIT   LVN ++V G L V     DG  P CP      L FE++K  R  +      P
Sbjct: 807 PWDITV--LVNLYKVHGRLPVHGT-TDG--PECPTAFLERLCFEMKKGFRETMLQLILSP 861

Query: 304 LS 305
           L+
Sbjct: 862 LN 863


>gi|50053795 eukaryotic translation initiation factor 4B [Homo
           sapiens]
          Length = 611

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 230 KNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELE 289
           K+P Y+   FLG +P+D+TE  +   FR     +V  P +     R   KG+ Y  FE  
Sbjct: 92  KSPPYTA--FLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERL--KGFGYAEFE-- 145

Query: 290 KSVRSLLQACS 300
             + SLL A S
Sbjct: 146 -DLDSLLSALS 155


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 24/193 (12%)

Query: 2    LFPTSAQESSRGLPDA---NDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHN 58
            L P +  +    +P A      CL  Q+  + G     S   + +++ +  H+   ML  
Sbjct: 2439 LLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHN--GMLSV 2496

Query: 59   PLGNV----LGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTS 114
            P   V    +G+PP S     P  S L    PA   R S   +     S SSS S S +S
Sbjct: 2497 PAPGVPHSDVGEPPASTGAQQP--SALAALQPAKERRSSSSSSSS--SSSSSSSSSSSSS 2552

Query: 115  GFSSGSDHLSDLISSLRISP-----------PLPFLSLSGGGPRDPLKMGVGSRMDQEQA 163
              SSGS       SSL + P           P P  ++  G P +P       R     +
Sbjct: 2553 SSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSS 2612

Query: 164  ALAAVTPSPTSAS 176
            + ++ + S +S+S
Sbjct: 2613 SSSSSSSSSSSSS 2625


>gi|21450675 RNA binding motif protein 46 [Homo sapiens]
          Length = 533

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 20/92 (21%)

Query: 220 WSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGS-----LSVEWPGKDGKHP 274
           W G  PPR        C+VF+G +P D+ E  LV  F   G      L +E+ G++    
Sbjct: 52  WEGPPPPRG-------CEVFVGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGEN---- 100

Query: 275 RCPPKGYVYLVFELEKSVRSLLQACSHDPLSP 306
               +GY ++++  ++  +  ++  ++  + P
Sbjct: 101 ----RGYAFVMYTTKEEAQLAIRILNNYEIRP 128


>gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]
          Length = 322

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 8/60 (13%)

Query: 235 SCKVFLGGVPWDITEAGLVNTFRVFG---SLSVEWPGKDGKHPRCPPKGYVYLVFELEKS 291
           S  +FLGG+P+++TE  ++  F  +G   ++++    K GK      KG+ +L +E ++S
Sbjct: 35  SAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGK-----SKGFCFLCYEDQRS 89


>gi|205277471 cochlin precursor [Homo sapiens]
          Length = 550

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 16  DANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPP 68
           DAN    G+QS  L+ W   ++     SS Q +T   +S  H P G  L K P
Sbjct: 105 DAN----GIQSQMLSRWSASFTVTKGKSSTQEATGQAVSTAHPPTGKRLKKTP 153


>gi|4758022 cochlin precursor [Homo sapiens]
          Length = 550

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 16  DANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPP 68
           DAN    G+QS  L+ W   ++     SS Q +T   +S  H P G  L K P
Sbjct: 105 DAN----GIQSQMLSRWSASFTVTKGKSSTQEATGQAVSTAHPPTGKRLKKTP 153


>gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]
          Length = 593

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 24/85 (28%)

Query: 220 WSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFG-----SLSVEWPGKDGKHP 274
           W G  P R        C+VF+G +P D+ E  LV  F   G      L +++ GK+    
Sbjct: 62  WEGPHPQRG-------CEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKN---- 110

Query: 275 RCPPKGYVYLVF----ELEKSVRSL 295
               +GY ++++    E +++VR L
Sbjct: 111 ----RGYAFVMYCHKHEAKRAVREL 131


>gi|148833511 RNA binding motif protein 47 isoform b [Homo sapiens]
          Length = 524

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 24/85 (28%)

Query: 220 WSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFG-----SLSVEWPGKDGKHP 274
           W G  P R        C+VF+G +P D+ E  LV  F   G      L +++ GK+    
Sbjct: 62  WEGPHPQRG-------CEVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMDFDGKN---- 110

Query: 275 RCPPKGYVYLVF----ELEKSVRSL 295
               +GY ++++    E +++VR L
Sbjct: 111 ----RGYAFVMYCHKHEAKRAVREL 131


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 46/171 (26%), Positives = 59/171 (34%), Gaps = 17/171 (9%)

Query: 65   GKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGF-------- 116
            G PPL+    +P           P  RG RL    +  + SS    SD SGF        
Sbjct: 1940 GPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIK 1999

Query: 117  -SSGSDHLSDLISSLRISPPLP-FLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTS 174
             S G       +SS   +   P   S   G P  P      SR ++ +   AA    P  
Sbjct: 2000 ESPGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELR---AAPRQGPAP 2056

Query: 175  ASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP 225
            A +R P A   P     E P    + E  +RL  +A A    T      LP
Sbjct: 2057 ARQRPPAARPSPG----ERPARRTTSESPSRLPVRAPAARPETVKRYASLP 2103


>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
          Length = 1247

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 37/190 (19%)

Query: 8   QESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPL------- 60
           ++  +  P+A+D CL  Q    +  DR    Q SDS   SS    + +  NP        
Sbjct: 493 KKKGKKFPEASDRCLRSQLSDSSSADRCLRNQSSDS---SSACLEIKVPKNPSAKRSKKE 549

Query: 61  GNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSG- 119
           G+  G  P   LP D   ++ ++    PSV     + RP       S  D++  G   G 
Sbjct: 550 GHPGGTTPKGLLP-DSFHTETLEDTEKPSV-----NERP-------SEKDAEQEGEGGGI 596

Query: 120 ------SDHLSDLISSLR--ISPPLPFLSLSGGG-PRDPLKMGVGSRMDQEQAALAAVTP 170
                  + L   +  LR  I P    ++ +G   P + L++ V S+MD++ A +    P
Sbjct: 597 ITRQTLKNMLDKEVKELRGEIFPSRDPITTAGQPLPGERLEIYVQSKMDEKNAHI----P 652

Query: 171 SPTSASKRWP 180
           S + A KR P
Sbjct: 653 SESIACKRDP 662


>gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform b
           [Homo sapiens]
          Length = 285

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 40/199 (20%), Positives = 78/199 (39%), Gaps = 38/199 (19%)

Query: 230 KNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSL---SVEWPGKDGKHPRCPPKGYVYLVF 286
           KN   + K+F+GG+ WD ++  L + F  FG +   +++     G+      +G+ +++F
Sbjct: 64  KNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR-----SRGFGFILF 118

Query: 287 ELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRL 346
           +   SV  +L    H             ++  R +  K               ++ + + 
Sbjct: 119 KDAASVEKVLDQKEH-------------RLDGRVIDPK---------------KAMAMKK 150

Query: 347 DPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYL 405
           DP + +FVG L+     E +     + FG +    +  D K     G   +TF  +    
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 209

Query: 406 KAVSAAFVEIKTTKFTKKV 424
           K +   F  +  +K   KV
Sbjct: 210 KVLEKKFHTVSGSKCEIKV 228


>gi|55956919 heterogeneous nuclear ribonucleoprotein A/B isoform a
           [Homo sapiens]
          Length = 332

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 40/199 (20%), Positives = 78/199 (39%), Gaps = 38/199 (19%)

Query: 230 KNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSL---SVEWPGKDGKHPRCPPKGYVYLVF 286
           KN   + K+F+GG+ WD ++  L + F  FG +   +++     G+      +G+ +++F
Sbjct: 64  KNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGR-----SRGFGFILF 118

Query: 287 ELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRL 346
           +   SV  +L    H             ++  R +  K               ++ + + 
Sbjct: 119 KDAASVEKVLDQKEH-------------RLDGRVIDPK---------------KAMAMKK 150

Query: 347 DPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYL 405
           DP + +FVG L+     E +     + FG +    +  D K     G   +TF  +    
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 209

Query: 406 KAVSAAFVEIKTTKFTKKV 424
           K +   F  +  +K   KV
Sbjct: 210 KVLEKKFHTVSGSKCEIKV 228


>gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo
           sapiens]
          Length = 420

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)

Query: 237 KVFLGGVPWDITEAGLVNTFRVFGSL-SVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSL 295
           KVF+GG+  D +E  +   F  FG + ++E P     + R   +G+ ++ +  E+ V+ L
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNER---RGFCFITYTDEEPVKKL 290

Query: 296 LQACSH 301
           L++  H
Sbjct: 291 LESRYH 296


>gi|31415870 dedicator of cytokinesis 3 [Homo sapiens]
          Length = 2030

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 6    SAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNV-- 63
            S   + RG   A+   +  +S+ +T    P +   +   + SS  S  S   +  GN+  
Sbjct: 1641 SGTSTPRGNVLASHSPMSPESIKMTHRHSPMNLMGTGRHSSSSLSSHAS---SEAGNMVM 1697

Query: 64   LGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHL 123
            LG   +   P D L   +   +P P  +GS  +   +  S++S  S S +S  S+ S  +
Sbjct: 1698 LGDGSMGDAPED-LYHHMQLAYPNPRYQGSVTNVSVLSSSQASPSSSSLSSTHSAPSQMI 1756

Query: 124  SDLISSLRISPPLP 137
            +   SS R SP LP
Sbjct: 1757 TSAPSSARGSPSLP 1770


>gi|133922582 zinc finger protein 358 [Homo sapiens]
          Length = 568

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 23/133 (17%)

Query: 96  DTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPR-DPLKMGV 154
           D  P  ++  S P D D    SS  D   D+I  + +       +LS G P+ DP+  G+
Sbjct: 70  DLDPDAEAPGSEPQDPDP--MSSSFDLDPDVIGPVPLILDPNSDTLSPGDPKVDPISSGL 127

Query: 155 GSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVN 214
            +   Q  A   AV P+P S                   P  PFS     R  R+++ ++
Sbjct: 128 -TATPQVLATSPAVLPAPAS-------------------PPRPFSCPDCGRAFRRSSGLS 167

Query: 215 EATCTWSGQLPPR 227
           +   T SG+ P R
Sbjct: 168 QHRRTHSGEKPYR 180


>gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]
          Length = 524

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 156 SRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNE 215
           S +D +QA      P P+     WPG +  P+      P+ P  I R   L   A    E
Sbjct: 19  SELDAKQAEAIMGAPGPSLTGSPWPGTAA-PAASYTPTPRSPRFIGRRQSLIEDARKERE 77

Query: 216 ATCTWSGQLPPRNYKNPI 233
           A    +    P    +P+
Sbjct: 78  AAVAAAAAAVPSEPGDPL 95


>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
           sapiens]
          Length = 437

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 10/106 (9%)

Query: 192 EAPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAG 251
           E  ++    +R  ++ R+   V      W     P    +   +  +F+  V +D TE+ 
Sbjct: 61  ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKT--LFVARVNYDTTESK 118

Query: 252 LVNTFRVFGSLS---VEWPGKDGKHPRCPPKGYVYLVFELEKSVRS 294
           L   F V+G +    + +  + GK     P+GY ++ +E E+ + S
Sbjct: 119 LRREFEVYGPIKRIHMVYSKRSGK-----PRGYAFIEYEHERDMHS 159


>gi|7661798 postsynaptic protein CRIPT [Homo sapiens]
          Length = 101

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 421 TKKVQIDPYLED--SLCHICSS---QPGPFFCRDQVCFKYFCRSC 460
           +KK + DPY ++  S C IC S   QPG  +C+     K  C  C
Sbjct: 42  SKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMC 86


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,681,871
Number of Sequences: 37866
Number of extensions: 1011342
Number of successful extensions: 3103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 3041
Number of HSP's gapped (non-prelim): 103
length of query: 486
length of database: 18,247,518
effective HSP length: 106
effective length of query: 380
effective length of database: 14,233,722
effective search space: 5408814360
effective search space used: 5408814360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.