Guide to the Human Genome
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Search of human proteins with 239755911

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239755911 PREDICTED: hypothetical protein [Homo sapiens]
         (667 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755911 PREDICTED: hypothetical protein [Homo sapiens]          1396   0.0  
gi|239744727 PREDICTED: hypothetical protein XP_002343254 [Homo ...   630   e-180
gi|239750425 PREDICTED: hypothetical protein XP_002347391 [Homo ...   393   e-109
gi|156627569 solute carrier family 34 (sodium phosphate), member...    35   0.29 
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]            34   0.50 
gi|153791244 hypothetical protein LOC55237 [Homo sapiens]              32   1.4  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         32   1.4  
gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]    31   3.2  
gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]    31   3.2  
gi|46195763 metastasis suppressor 1-like [Homo sapiens]                31   3.2  
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    31   4.2  
gi|145309328 papilin [Homo sapiens]                                    31   4.2  
gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo sapiens]      30   5.5  
gi|149773456 hypothetical protein LOC643314 [Homo sapiens]             30   9.4  
gi|148613882 homeobox A4 [Homo sapiens]                                30   9.4  
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]         30   9.4  
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]          30   9.4  
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]            30   9.4  
gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo...    30   9.4  
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]            30   9.4  

>gi|239755911 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 667

 Score = 1396 bits (3613), Expect = 0.0
 Identities = 667/667 (100%), Positives = 667/667 (100%)

Query: 1   MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW 60
           MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW
Sbjct: 1   MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW 60

Query: 61  YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA 120
           YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA
Sbjct: 61  YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA 120

Query: 121 PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS 180
           PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS
Sbjct: 121 PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS 180

Query: 181 PVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRD 240
           PVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRD
Sbjct: 181 PVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRD 240

Query: 241 VCPNCNPQQLPQEVQQLLLPVAELGHSSSSDSEELCSSLHTCHRKWRKEPPVGQTRHMGT 300
           VCPNCNPQQLPQEVQQLLLPVAELGHSSSSDSEELCSSLHTCHRKWRKEPPVGQTRHMGT
Sbjct: 241 VCPNCNPQQLPQEVQQLLLPVAELGHSSSSDSEELCSSLHTCHRKWRKEPPVGQTRHMGT 300

Query: 301 WGVPAGGDTVPSLSPAGWSGYSFHGLPAAVAGNPLVCLGTAILHFLLSAANPTSHNFQWV 360
           WGVPAGGDTVPSLSPAGWSGYSFHGLPAAVAGNPLVCLGTAILHFLLSAANPTSHNFQWV
Sbjct: 301 WGVPAGGDTVPSLSPAGWSGYSFHGLPAAVAGNPLVCLGTAILHFLLSAANPTSHNFQWV 360

Query: 361 QGPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEAQAQALDGHER 420
           QGPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEAQAQALDGHER
Sbjct: 361 QGPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEAQAQALDGHER 420

Query: 421 ARALCLLLMRQAAEHSPWDECNELLANTLALSSAPGAHSEDGLAFQVVSWCLDSSSWGKL 480
           ARALCLLLMRQAAEHSPWDECNELLANTLALSSAPGAHSEDGLAFQVVSWCLDSSSWGKL
Sbjct: 421 ARALCLLLMRQAAEHSPWDECNELLANTLALSSAPGAHSEDGLAFQVVSWCLDSSSWGKL 480

Query: 481 FQKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLLSTA 540
           FQKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLLSTA
Sbjct: 481 FQKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLLSTA 540

Query: 541 LSLAGGLVIGRLVLTTFTGCCSFPALLYLLLSNLGFGTPYFLRICGAQRQRGGSQVRPAG 600
           LSLAGGLVIGRLVLTTFTGCCSFPALLYLLLSNLGFGTPYFLRICGAQRQRGGSQVRPAG
Sbjct: 541 LSLAGGLVIGRLVLTTFTGCCSFPALLYLLLSNLGFGTPYFLRICGAQRQRGGSQVRPAG 600

Query: 601 HPRPGLGMVGTGSYLGELILQHLFWRPDIGEEEVEEVAWGLGVDLLFAKINVRDSDGLRW 660
           HPRPGLGMVGTGSYLGELILQHLFWRPDIGEEEVEEVAWGLGVDLLFAKINVRDSDGLRW
Sbjct: 601 HPRPGLGMVGTGSYLGELILQHLFWRPDIGEEEVEEVAWGLGVDLLFAKINVRDSDGLRW 660

Query: 661 CQAQRLL 667
           CQAQRLL
Sbjct: 661 CQAQRLL 667


>gi|239744727 PREDICTED: hypothetical protein XP_002343254 [Homo
           sapiens]
          Length = 567

 Score =  630 bits (1624), Expect = e-180
 Identities = 306/306 (100%), Positives = 306/306 (100%)

Query: 362 GPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEAQAQALDGHERA 421
           GPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEAQAQALDGHERA
Sbjct: 262 GPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEAQAQALDGHERA 321

Query: 422 RALCLLLMRQAAEHSPWDECNELLANTLALSSAPGAHSEDGLAFQVVSWCLDSSSWGKLF 481
           RALCLLLMRQAAEHSPWDECNELLANTLALSSAPGAHSEDGLAFQVVSWCLDSSSWGKLF
Sbjct: 322 RALCLLLMRQAAEHSPWDECNELLANTLALSSAPGAHSEDGLAFQVVSWCLDSSSWGKLF 381

Query: 482 QKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLLSTAL 541
           QKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLLSTAL
Sbjct: 382 QKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLLSTAL 441

Query: 542 SLAGGLVIGRLVLTTFTGCCSFPALLYLLLSNLGFGTPYFLRICGAQRQRGGSQVRPAGH 601
           SLAGGLVIGRLVLTTFTGCCSFPALLYLLLSNLGFGTPYFLRICGAQRQRGGSQVRPAGH
Sbjct: 442 SLAGGLVIGRLVLTTFTGCCSFPALLYLLLSNLGFGTPYFLRICGAQRQRGGSQVRPAGH 501

Query: 602 PRPGLGMVGTGSYLGELILQHLFWRPDIGEEEVEEVAWGLGVDLLFAKINVRDSDGLRWC 661
           PRPGLGMVGTGSYLGELILQHLFWRPDIGEEEVEEVAWGLGVDLLFAKINVRDSDGLRWC
Sbjct: 502 PRPGLGMVGTGSYLGELILQHLFWRPDIGEEEVEEVAWGLGVDLLFAKINVRDSDGLRWC 561

Query: 662 QAQRLL 667
           QAQRLL
Sbjct: 562 QAQRLL 567



 Score =  556 bits (1434), Expect = e-158
 Identities = 261/261 (100%), Positives = 261/261 (100%)

Query: 1   MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW 60
           MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW
Sbjct: 1   MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW 60

Query: 61  YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA 120
           YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA
Sbjct: 61  YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA 120

Query: 121 PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS 180
           PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS
Sbjct: 121 PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS 180

Query: 181 PVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRD 240
           PVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRD
Sbjct: 181 PVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQGLAHQRLPEGGQEVQGQRD 240

Query: 241 VCPNCNPQQLPQEVQQLLLPV 261
           VCPNCNPQQLPQEVQQLLLPV
Sbjct: 241 VCPNCNPQQLPQEVQQLLLPV 261


>gi|239750425 PREDICTED: hypothetical protein XP_002347391 [Homo
           sapiens]
          Length = 341

 Score =  393 bits (1010), Expect = e-109
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW 60
           MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW
Sbjct: 1   MGYGGTWAVSGPPSLQGQVNGMRSWLQANLMNLHSSSWVNISRAPQKNSMCWSVSISPTW 60

Query: 61  YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA 120
           YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA
Sbjct: 61  YMVWAWGGEELEVDVGEAAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQPQA 120

Query: 121 PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS 180
           PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS
Sbjct: 121 PDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPRLHSSTSS 180

Query: 181 PVMV 184
           PVMV
Sbjct: 181 PVMV 184


>gi|156627569 solute carrier family 34 (sodium phosphate), member 1
           [Homo sapiens]
          Length = 639

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 9/65 (13%)

Query: 495 RAEAIPVGVASQEKQRPAPRGVPSL-QDGSWAAQAP--------WGTHLTLLSTALSLAG 545
           R E +P  +A +E+Q+P  R VP L Q G+   + P        +   L +LS+A  LAG
Sbjct: 70  RHEPLPAKLALEEEQKPESRLVPKLRQAGAMLLKVPLMLTFLYLFVCSLDMLSSAFQLAG 129

Query: 546 GLVIG 550
           G V G
Sbjct: 130 GKVAG 134


>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 19/163 (11%)

Query: 78  AAGAQLHLQWAEHGQQLQGDDGAQAGPHGRHALHILQLPQ----PQAPDGCRVDVLVLPP 133
           +AG Q H+  +  GQ   G   A+AG  G+HA+H+   PQ       P G    V  +  
Sbjct: 180 SAGRQRHVVHSGVGQ---GQAQAKAGLQGQHAVHLPGWPQGVPLGNGPPGVGQHVCPVLQ 236

Query: 134 ARVRSTGTDAAVIPWLAGRASPCQPLTRAHTHATRMCRPR------LHSSTSSPVMVSCS 187
              R  GT   +   L+       P ++   H   +CR R      LH       +   +
Sbjct: 237 GLPRGPGTQVHLAYGLSSERQAAVPDSQHQVHI--LCRDRPEHELDLHVGLWEGKVAEGA 294

Query: 188 PSACSLSSRSPC----PWPGNEHQCEDIRFLQVLLRVQGLAHQ 226
                LS+  P     P      + + +  LQ +L++ G   Q
Sbjct: 295 SQGSGLSTGPPSVQQPPHLSGSRRAQQVPVLQNMLQIHGAQWQ 337


>gi|153791244 hypothetical protein LOC55237 [Homo sapiens]
          Length = 702

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 478 GKLFQKKQAKHAGNPEPRAEAIPVGVASQEKQRPAPRGVPSLQDGSWAAQAPWGTHLTLL 537
           G+  ++KQ K AG       A PVG AS E     P    +LQ+G+ A   P      LL
Sbjct: 569 GQEAEEKQEKEAGRDVTAVMAPPVG-ASSEDVEGGPSREGALQEGATAQGQPHSG--PLL 625

Query: 538 STALSLAGGLVIGRLVLTTFTGCCSFPALLYLLL 571
           S  +  A G   GR+++        F A   L L
Sbjct: 626 SQPVVAAAGGRDGRMLVMDMIATTKFKAQAKLFL 659


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 113  LQLPQPQAPDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRA-----SPCQPLTRAHTHAT 167
            L  P P AP+       +L PA   S      + P  A +      SP  PL      A 
Sbjct: 1555 LASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAP 1614

Query: 168  RM-CRPRLHSS-TSSPVMVSCSPSACSLSSRSPCPWP 202
                 P L SS T  PVM   S    SL+S SP P P
Sbjct: 1615 SPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAP 1651


>gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]
          Length = 407

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 176 SSTSSPVMVSCSPSA---CSLSSRSPCPWPGN-------EHQCEDIRFLQVLLRVQGLAH 225
           SST+S    + +PSA    S +S SP P  GN         Q   +  LQ +L    +  
Sbjct: 219 SSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPA 278

Query: 226 QRLPEGGQEVQGQRDVCPN-CNPQQLPQEVQQLLLPVAELGHSSSSDSEELCSSL 279
              P GGQ+V     + P    P     +VQ+ LLP    G S    ++E+ ++L
Sbjct: 279 G--PAGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTL 331


>gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]
          Length = 407

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 176 SSTSSPVMVSCSPSA---CSLSSRSPCPWPGN-------EHQCEDIRFLQVLLRVQGLAH 225
           SST+S    + +PSA    S +S SP P  GN         Q   +  LQ +L    +  
Sbjct: 219 SSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPA 278

Query: 226 QRLPEGGQEVQGQRDVCPN-CNPQQLPQEVQQLLLPVAELGHSSSSDSEELCSSL 279
              P GGQ+V     + P    P     +VQ+ LLP    G S    ++E+ ++L
Sbjct: 279 G--PAGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTL 331


>gi|46195763 metastasis suppressor 1-like [Homo sapiens]
          Length = 747

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 42/167 (25%), Positives = 57/167 (34%), Gaps = 16/167 (9%)

Query: 172 PRLHSSTSSPVMVSCS-PSACSLSSRSPCPWPGNEHQCEDIRFLQVLLRVQ-GLAHQRLP 229
           P   SS+SS     CS PS+ S +     PWPG           +     Q      RL 
Sbjct: 262 PSSPSSSSSRKSSMCSAPSSSSSAKGGGAPWPGGAQTYSPSSTCRYRSLAQPATTTARLS 321

Query: 230 EGGQEVQG--QRDVCPNCNPQQLPQEVQQLLLPVAELGHSSSSDSEELCSSLHTCH---R 284
                  G   +D   +  P  +P ++        +   S+SS++ E C S+  C     
Sbjct: 322 SVSSHDSGFVSQDATYSKPPSPMPSDITS-----QKSSSSASSEASETCQSVSECSSPTS 376

Query: 285 KWRK----EPPVGQTRHMGTWGVPAGGDTVPSLSPAGWSGYSFHGLP 327
            W K    E P G T       V    DT P  +  G  G S    P
Sbjct: 377 DWSKVGSHEQPSGATLQRRKDRVELLRDTEPGPASGGTLGPSGEEAP 423


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 14/98 (14%)

Query: 154 SPCQPLTRAHTHATRMCRPRLHSSTSSPVMVSCSPSACSLSSRSPCPWPGNEHQCEDIRF 213
           SP +P  RA      +  PR     ++PV    SP      S  P        Q +    
Sbjct: 687 SPAEPEPRAVGRTNHLSLPRFAPVVTTPVKAEVSPHGAPALSNGP--------QTQ---- 734

Query: 214 LQVLLRVQGLAHQRLPEGGQEVQGQRDVCPNCNPQQLP 251
            Q+L  +Q L  Q LP+     Q Q  + P  +PQQ+P
Sbjct: 735 AQLLQPLQALQTQLLPQALPPPQPQ--LQPPPSPQQMP 770


>gi|145309328 papilin [Homo sapiens]
          Length = 1251

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 51/214 (23%), Positives = 74/214 (34%), Gaps = 47/214 (21%)

Query: 351 NPTSHNFQWVQGPGQVQALTFGLLQQGGDAVGIHGCLAQLHQGQEEGLQCGVEGLQQGEA 410
           +P     +W  GP    + + G    GG       C++    G +E ++         EA
Sbjct: 331 HPCPETKRWKAGPWAPCSASCG----GGSQSRSVYCISSDGAGIQEAVE---------EA 377

Query: 411 QAQALDGHERARALCLLLMRQAAEHSPWDECN------------------ELLANTLALS 452
           +   L G   A   C L    A    PW EC+                    L +T A S
Sbjct: 378 ECAGLPGKPPAIQACNLQRCAAWSPEPWGECSVSCGVGVRKRSVTCRGERGSLLHTAACS 437

Query: 453 -------SAPGAHSEDGL----AFQVVSWCLDSSSWGKLFQKKQAKHAGNPEPRAEAI-- 499
                  + P  H +  L    A+ V +W L S S     +++Q   A  P     ++  
Sbjct: 438 LEDRPPLTEPCVHEDCPLLSDQAWHVGTWGLCSKSCSSGTRRRQVICAIGPPSHCGSLQH 497

Query: 500 --PVGVASQEKQR-PAPRGVPSLQDGSWAAQAPW 530
             PV V     Q    P+ VPS+QD    A  PW
Sbjct: 498 SKPVDVEPCNTQPCHLPQEVPSMQDVHTPASNPW 531


>gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo sapiens]
          Length = 1040

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 55  SISPTWYMVWAWGGEELEVDVGEA-AGAQLHLQWAEHGQQLQGDDG 99
           S  PTW+  W      +E+ + EA  G ++HL W   G+ L   DG
Sbjct: 72  SFGPTWWTCWF----RVELTIPEAWVGQEVHLCWESDGEGLVWRDG 113


>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
          Length = 1427

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 473 DSSSWGKLFQKKQAKHAGNPEPRAEA-IPVGVASQEKQRPA-PRGVPSLQDGSWAAQAPW 530
           DS S+  +F +KQ   AGN EP  E  IPV       QRP+    VP+++D   AA  P 
Sbjct: 801 DSDSFLNIFPEKQVTKAGNTEPVLEEWIPV------LQRPSRTAAVPTVKDALDAA-LPS 853

Query: 531 GTHLTLLSTALSLAGGLVIGRLV 553
               T ++   +  G  V+  LV
Sbjct: 854 PEEGTSIAAVPAPEGTAVVAALV 876


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 100 AQAGPHGRHALHIL--QLPQPQAPDGCRVDVLVLPPARVRSTGTDAAVIPWLAGRASPCQ 157
           A+   HG HA H+L  QLP P  P         +PPA  R      A     AG ++P  
Sbjct: 123 AKGPAHGLHASHVLQPQLPPPLQP-------RAVPPAAPRRCEAAPATPGVPAGGSAPAC 175

Query: 158 PLTRA 162
           PL  A
Sbjct: 176 PLLLA 180


>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
          Length = 1259

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 272 SEELCSSLHTCHRKWRKEPPVGQTRHMGTWGVP--AGGDTVPSLSPAG 317
           S+  CS LH+ H +W++ P    TR + T  VP  +G       SP G
Sbjct: 840 SQSTCS-LHSIHSEWQERPLCEHTRTLSTHSVPNISGATCSAFASPFG 886


>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
          Length = 1256

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 272 SEELCSSLHTCHRKWRKEPPVGQTRHMGTWGVP--AGGDTVPSLSPAG 317
           S+  CS LH+ H +W++ P    TR + T  VP  +G       SP G
Sbjct: 840 SQSTCS-LHSIHSEWQERPLCEHTRTLSTHSVPNISGATCSAFASPFG 886


>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 16/77 (20%)

Query: 35  SSSWVNISRAPQKNSMCWSVSISPTWYMVWAWGGEELEVDVGEAAGA----QLHLQWAEH 90
           +SSW  + R P       ++ + PTW         +  + +G A G      LHLQ  E 
Sbjct: 179 ASSWAGVPRQPL------ALDLRPTWK------APDARLALGSARGPGRRLALHLQVPEG 226

Query: 91  GQQLQGDDGAQAGPHGR 107
            +QL    GAQ   H R
Sbjct: 227 ARQLGPRTGAQPSRHRR 243


>gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo
           sapiens]
          Length = 901

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 9/57 (15%)

Query: 150 AGRASPC-QPLTRAH---THATRMCRPRLHSSTSSPVMVSCSPSACSLSSRSPCPWP 202
           A  A+ C +P ++AH   TH    C     SS+++P +  C P+   LS     PWP
Sbjct: 20  AAPAATCTEPWSQAHGSPTHPNHTCEAGSPSSSTAPDLPPCVPTELLLS-----PWP 71


>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 16/77 (20%)

Query: 35  SSSWVNISRAPQKNSMCWSVSISPTWYMVWAWGGEELEVDVGEAAGA----QLHLQWAEH 90
           +SSW  + R P       ++ + PTW         +  + +G A G      LHLQ  E 
Sbjct: 179 ASSWAGVPRQPL------ALDLRPTWK------APDARLALGSARGPGRRLALHLQVPEG 226

Query: 91  GQQLQGDDGAQAGPHGR 107
            +QL    GAQ   H R
Sbjct: 227 ARQLGPRTGAQPSRHRR 243


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,570,975
Number of Sequences: 37866
Number of extensions: 1701537
Number of successful extensions: 4916
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4901
Number of HSP's gapped (non-prelim): 32
length of query: 667
length of database: 18,247,518
effective HSP length: 109
effective length of query: 558
effective length of database: 14,120,124
effective search space: 7879029192
effective search space used: 7879029192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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