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Search of human proteins with 239755885
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]
(536 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens] 1063 0.0
gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo sa... 1013 0.0
gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens] 1013 0.0
gi|157779135 succinate-CoA ligase, GDP-forming beta subunit prec... 774 0.0
gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit prec... 375 e-104
gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens] 35 0.13
gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens] 35 0.13
gi|144953907 major facilitator superfamily domain containing 6 [... 32 1.1
gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo ... 31 2.5
gi|4826671 cadherin 18, type 2 preproprotein [Homo sapiens] 31 3.3
gi|9966839 G protein-coupled receptor 84 [Homo sapiens] 30 5.5
gi|42542386 solute carrier family 22 (organic anion/cation trans... 30 7.2
gi|22325364 ubiquitin associated protein 2 [Homo sapiens] 30 7.2
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 29 9.5
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 29 9.5
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 29 9.5
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 29 9.5
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens] 29 9.5
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens] 29 9.5
>gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]
Length = 536
Score = 1063 bits (2749), Expect = 0.0
Identities = 536/536 (100%), Positives = 536/536 (100%)
Query: 1 MPLGNSSPGPHVNTNTLVCVQRMRRWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPH 60
MPLGNSSPGPHVNTNTLVCVQRMRRWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPH
Sbjct: 1 MPLGNSSPGPHVNTNTLVCVQRMRRWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPH 60
Query: 61 LHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQA 120
LHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQA
Sbjct: 61 LHPRMDFRPQQQRQPYFLCDTGATTFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQA 120
Query: 121 LALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRL 180
LALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRL
Sbjct: 121 LALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRL 180
Query: 181 NAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGV 240
NAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGV
Sbjct: 181 NAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGV 240
Query: 241 KVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDI 300
KVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDI
Sbjct: 241 KVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDI 300
Query: 301 FEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVC 360
FEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVC
Sbjct: 301 FEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVC 360
Query: 361 FDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMA 420
FDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMA
Sbjct: 361 FDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMA 420
Query: 421 TCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANG 480
TCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANG
Sbjct: 421 TCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANG 480
Query: 481 ITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASVAKK 536
ITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASVAKK
Sbjct: 481 ITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSAVDLEDAAKKAVASVAKK 536
>gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo
sapiens]
Length = 543
Score = 1013 bits (2618), Expect = 0.0
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 25 RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT 84
RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT
Sbjct: 32 RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT 91
Query: 85 TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS 144
TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS
Sbjct: 92 TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS 151
Query: 145 LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG 204
LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG
Sbjct: 152 LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG 211
Query: 205 LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD 264
LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD
Sbjct: 212 LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD 271
Query: 265 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS 324
QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS
Sbjct: 272 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS 331
Query: 325 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK 384
QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK
Sbjct: 332 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK 391
Query: 385 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE 444
SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE
Sbjct: 392 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE 451
Query: 445 AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ 504
AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ
Sbjct: 452 AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ 511
Query: 505 EAQEILNSRLPITSAVDLEDAAKKAVASVAKK 536
EAQEILNSRLPITSAVDLEDAAKKAVASVAKK
Sbjct: 512 EAQEILNSRLPITSAVDLEDAAKKAVASVAKK 543
>gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]
Length = 543
Score = 1013 bits (2618), Expect = 0.0
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 25 RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT 84
RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT
Sbjct: 32 RWHHGDCLVTPLSNQHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQPYFLCDTGAT 91
Query: 85 TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS 144
TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS
Sbjct: 92 TFLTGPQIPASRAFAPGFLFKIASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLS 151
Query: 145 LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG 204
LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG
Sbjct: 152 LQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSG 211
Query: 205 LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD 264
LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD
Sbjct: 212 LKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD 271
Query: 265 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS 324
QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS
Sbjct: 272 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKS 331
Query: 325 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK 384
QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK
Sbjct: 332 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDK 391
Query: 385 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE 444
SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE
Sbjct: 392 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKE 451
Query: 445 AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ 504
AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ
Sbjct: 452 AQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQ 511
Query: 505 EAQEILNSRLPITSAVDLEDAAKKAVASVAKK 536
EAQEILNSRLPITSAVDLEDAAKKAVASVAKK
Sbjct: 512 EAQEILNSRLPITSAVDLEDAAKKAVASVAKK 543
>gi|157779135 succinate-CoA ligase, GDP-forming beta subunit
precursor [Homo sapiens]
Length = 432
Score = 774 bits (1999), Expect = 0.0
Identities = 404/432 (93%), Positives = 417/432 (96%), Gaps = 1/432 (0%)
Query: 106 IASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFF 165
+ASP+AAQA KLL+ALAL PRFL A S+AVQLTSRRWL+LQE QSKKLMSDN V VQRFF
Sbjct: 1 MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60
Query: 166 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQM 225
VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLK GVHLTKDPNVVGQLAKQM
Sbjct: 61 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120
Query: 226 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEV 285
IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD+SCNGP+LVGSPQ G+DIEEV
Sbjct: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180
Query: 286 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 345
AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV
Sbjct: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240
Query: 346 EVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 405
EVNPFGETPEGQVVCFDAKINFDDNAEF+QKDIFAMDDKSENEPIENEAAKYDLKYIGLD
Sbjct: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300
Query: 406 GNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILV 465
GNIACFVNGAGLAMATCDIIFLNG KPA+FLDLGGGVKEAQVYQAF L TADPKVEAILV
Sbjct: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360
Query: 466 NIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPITSAVDLED 524
NIFGGIVNCAIIANGITKAC+ELELKVPLVV LEGTNVQEAQ+IL NS LPITSA+DLED
Sbjct: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
Query: 525 AAKKAVASVAKK 536
AAKKAVASVAKK
Sbjct: 421 AAKKAVASVAKK 432
>gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit
precursor [Homo sapiens]
Length = 463
Score = 375 bits (963), Expect = e-104
Identities = 200/397 (50%), Positives = 274/397 (69%), Gaps = 1/397 (0%)
Query: 135 VQLTSRRWLSLQECQSKKLMSDNRVTVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 194
VQ +R LSL E S +L+ + V+V + +VA + +EA AK+L +K++V+KAQ+LAG
Sbjct: 45 VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104
Query: 195 GRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 254
GRGKG F SGLK GV + P ++ QMIG L TKQT ++G N+V+V E
Sbjct: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164
Query: 255 RETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 314
RE Y AI M++S GP+L+GS G++IE+VAA +PE I KE IDI EGIK QA ++A+
Sbjct: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224
Query: 315 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQ 374
+GF + AA+ + KLY+LFLK DAT +E+NP E +G V+C DAKINFD N+ ++
Sbjct: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284
Query: 375 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPAS 434
QK IF + D ++ + + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+G PA+
Sbjct: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
Query: 435 FLDLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 494
FLD+GGG QV +AF L T+D KV AILVNIFGGI+ C +IA GI A ++LE+K+P+
Sbjct: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
Query: 495 VVWLEGTNVQEAQEIL-NSRLPITSAVDLEDAAKKAV 530
VV L+GT V +A+ ++ +S L I + DL++AA+ V
Sbjct: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]
Length = 1091
Score = 35.4 bits (80), Expect = 0.13
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 323 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 378
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
Query: 379 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 429
F E P E A D K + G I V G G ++ D I G
Sbjct: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
Query: 430 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 480
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
Query: 481 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 510
I +A ++ E +V + V G N QE ++
Sbjct: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
>gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]
Length = 1101
Score = 35.4 bits (80), Expect = 0.13
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 323 KSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK----DI 378
K A I+ L+N + + T +E+NP T +G V D D A++ K DI
Sbjct: 178 KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATADYICKVKWGDI 236
Query: 379 -FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLAMATCDIIFLNG 429
F E P E A D K + G I V G G ++ D I G
Sbjct: 237 EFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLG 296
Query: 430 --RKPASFLDLGGGVKEAQVYQ----AFTLPTADPKVEAILVNIFGGIVNCAIIA---NG 480
+ A++ + G E Q Y +L T + + ++ I G I N +A G
Sbjct: 297 GVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKG 356
Query: 481 ITKACQEL-----ELKVPLVVWLEGTNVQEAQEIL 510
I +A ++ E +V + V G N QE ++
Sbjct: 357 IVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVM 391
>gi|144953907 major facilitator superfamily domain containing 6
[Homo sapiens]
Length = 791
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 460 VEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEILNSRLPITSA 519
+ +LVN FG A GI AC + L L+ WL + +E + +L R+P+ S+
Sbjct: 589 IGGVLVNYFGA----AATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSS 644
>gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo
sapiens]
Length = 375
Score = 31.2 bits (69), Expect = 2.5
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 24 RRWHHGDCLVTPLSNQHQTLETSSQV-SW--------SLIPTRRPHLHPRMDFRPQQQRQ 74
RR H DC V+ + +H+ S++V SW SL+ +R P +HP Q
Sbjct: 224 RRATHRDCCVSLTAPKHRGDGDSARVTSWDDTTHHNRSLLGSRGPRVHPGPHHCHHQGPG 283
Query: 75 PYFLCDTGATTFLTGP 90
P TGA FL P
Sbjct: 284 PGLEPPTGAPQFLPSP 299
>gi|4826671 cadherin 18, type 2 preproprotein [Homo sapiens]
Length = 790
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 208 GVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQS- 266
G L +DP+ L + I YN+ + + + LD + I + S
Sbjct: 403 GTVLAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWYNITVTASE 462
Query: 267 CNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQ 308
+ P L+ GI + +V + PEL + I + E K Q
Sbjct: 463 IDNPDLLSHVTVGIRVLDVNDNPPELAREYDIIVCENSKPGQ 504
>gi|9966839 G protein-coupled receptor 84 [Homo sapiens]
Length = 396
Score = 30.0 bits (66), Expect = 5.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 265 QSCNGPMLVGSPQEGIDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 314
Q + + G P EGI E V+A+ + + + ++ + I +A++MAE
Sbjct: 239 QELDSRLASGGPSEGISSEPVSAATTQTLEGDSSEVGDQINSKRAKQMAE 288
>gi|42542386 solute carrier family 22 (organic anion/cation
transporter), member 9 [Homo sapiens]
Length = 553
Score = 29.6 bits (65), Expect = 7.2
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 111 AAQAWKLLQALALLPRFLVARSRAVQLTSRRWL-----------SLQECQSKKLMSDNRV 159
A + W +LQ + +P F++ + + L S RWL L++ + M + R
Sbjct: 254 AIRDWHILQLVVSVPYFVIFLTSSWLLESARWLIINNKPEEGLKELRKAAHRSGMKNARD 313
Query: 160 TVQRFFVADTANEALEAAKR 179
T+ + T + LEAA++
Sbjct: 314 TLTLEILKSTMKKELEAAQK 333
>gi|22325364 ubiquitin associated protein 2 [Homo sapiens]
Length = 1119
Score = 29.6 bits (65), Expect = 7.2
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 4 GNSSPGPHVNTNTLVCVQRMRRWHHGDCLVTPLSNQHQTLETSSQVSWSL-IPTRRPHLH 62
G +P N + + +++ G TP + Q+ T ++ SW L PT + +
Sbjct: 361 GELAPPKMANITSSQILDQLKAPSLGQFTTTPSTQQNSTSHPTTTTSWDLKPPTSQSSVL 420
Query: 63 PRMDFRPQQQRQP 75
+DF+ Q + P
Sbjct: 421 SHLDFKSQPEPSP 433
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 29.3 bits (64), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 39 QHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQ 74
QH+ L+ Q W L H HP + QQQ+Q
Sbjct: 434 QHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQ 469
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 29.3 bits (64), Expect = 9.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 39 QHQTLETSSQVSWSLIPTRRPHLHPRMDFRPQQQRQ 74
QH+ L+ Q W L H HP + QQQ+Q
Sbjct: 434 QHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQ 469
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 29.3 bits (64), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 10 PHVNTNTLVCVQRMRRWHHGDCL 32
PH N ++C R W HGDC+
Sbjct: 276 PH-NNRFMICCDRCEEWFHGDCV 297
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 29.3 bits (64), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 10 PHVNTNTLVCVQRMRRWHHGDCL 32
PH N ++C R W HGDC+
Sbjct: 276 PH-NNRFMICCDRCEEWFHGDCV 297
>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 29.3 bits (64), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 10 PHVNTNTLVCVQRMRRWHHGDCL 32
PH N ++C R W HGDC+
Sbjct: 276 PH-NNRFMICCDRCEEWFHGDCV 297
>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 29.3 bits (64), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 10 PHVNTNTLVCVQRMRRWHHGDCL 32
PH N ++C R W HGDC+
Sbjct: 276 PH-NNRFMICCDRCEEWFHGDCV 297
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,157,179
Number of Sequences: 37866
Number of extensions: 813086
Number of successful extensions: 1785
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1775
Number of HSP's gapped (non-prelim): 20
length of query: 536
length of database: 18,247,518
effective HSP length: 107
effective length of query: 429
effective length of database: 14,195,856
effective search space: 6090022224
effective search space used: 6090022224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.