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Search of human proteins with 239755748
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755748 PREDICTED: ovostatin [Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755748 PREDICTED: ovostatin [Homo sapiens] 509 e-145
gi|169204289 PREDICTED: ovostatin [Homo sapiens] 223 2e-58
gi|239744583 PREDICTED: ovostatin 2 [Homo sapiens] 204 6e-53
gi|239744557 PREDICTED: hypothetical protein LOC728715 [Homo sap... 191 5e-49
gi|169205183 PREDICTED: similar to hCG38149 [Homo sapiens] 190 1e-48
gi|239755754 PREDICTED: ovostatin 2 [Homo sapiens] 158 4e-39
gi|66932947 alpha-2-macroglobulin precursor [Homo sapiens] 143 1e-34
gi|162809334 pregnancy-zone protein [Homo sapiens] 141 6e-34
gi|74271845 alpha-2-macroglobulin-like 1 [Homo sapiens] 122 2e-28
gi|227430303 CD109 antigen isoform 3 precursor [Homo sapiens] 57 1e-08
gi|115529484 CD109 antigen isoform 1 precursor [Homo sapiens] 57 1e-08
gi|118600977 C3 and PZP-like, alpha-2-macroglobulin domain conta... 55 6e-08
gi|169206162 PREDICTED: hypothetical protein [Homo sapiens] 54 1e-07
gi|67190748 complement component 4A preproprotein [Homo sapiens] 53 3e-07
gi|178557739 complement component 4B preproprotein [Homo sapiens] 53 3e-07
gi|239758130 PREDICTED: similar to complement component 4B (Chil... 53 3e-07
gi|239740684 PREDICTED: similar to C4A protein isoform 1 [Homo s... 53 3e-07
gi|115298678 complement component 3 precursor [Homo sapiens] 52 7e-07
gi|169214179 PREDICTED: similar to complement component 3 [Homo ... 52 7e-07
gi|239756028 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-06
gi|227430301 CD109 antigen isoform 2 precursor [Homo sapiens] 45 5e-05
gi|239740686 PREDICTED: similar to C4A protein isoform 2 [Homo s... 39 0.006
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 30 2.1
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 30 2.1
gi|212276104 leucine rich repeat (in FLII) interacting protein 1... 30 2.1
gi|212276096 leucine rich repeat (in FLII) interacting protein 1... 30 2.1
gi|212276070 leucine rich repeat (in FLII) interacting protein 1... 30 2.1
gi|39545575 hypothetical protein LOC55924 isoform 2 [Homo sapiens] 30 2.1
gi|9506861 hypothetical protein LOC55924 isoform 1 [Homo sapiens] 30 2.1
gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo... 30 2.7
>gi|239755748 PREDICTED: ovostatin [Homo sapiens]
Length = 257
Score = 509 bits (1312), Expect = e-145
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MAVLRHGGEEELALILQVGAKDLRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDPKSQR 60
MAVLRHGGEEELALILQVGAKDLRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDPKSQR
Sbjct: 1 MAVLRHGGEEELALILQVGAKDLRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDPKSQR 60
Query: 61 GKRGWLSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKY 120
GKRGWLSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKY
Sbjct: 61 GKRGWLSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKY 120
Query: 121 NVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSS 180
NVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSS
Sbjct: 121 NVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSS 180
Query: 181 IEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEK 240
IEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEK
Sbjct: 181 IEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEK 240
Query: 241 EEYALAFYNIDSSSVSE 257
EEYALAFYNIDSSSVSE
Sbjct: 241 EEYALAFYNIDSSSVSE 257
>gi|169204289 PREDICTED: ovostatin [Homo sapiens]
Length = 1353
Score = 223 bits (567), Expect = 2e-58
Identities = 116/140 (82%), Positives = 123/140 (87%), Gaps = 4/140 (2%)
Query: 57 KSQRGKRGWLSVSASR----SEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCT 112
K RG+ G S + SEGSSEIFQVNGHNRLLVQRSEVTQAPG+YTVDVEGHGCT
Sbjct: 1195 KLARGEEGLFSKDQNTVTFSSEGSSEIFQVNGHNRLLVQRSEVTQAPGEYTVDVEGHGCT 1254
Query: 113 FIQATLKYNVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLS 172
FIQATLKYNVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLS
Sbjct: 1255 FIQATLKYNVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLS 1314
Query: 173 GFTPTMSSIEELENKGQVMK 192
GFTPTMSSIEE+ N+ + +
Sbjct: 1315 GFTPTMSSIEEVNNRSLIFQ 1334
>gi|239744583 PREDICTED: ovostatin 2 [Homo sapiens]
Length = 1394
Score = 204 bits (519), Expect = 6e-53
Identities = 106/118 (89%), Positives = 109/118 (92%), Gaps = 1/118 (0%)
Query: 73 SEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKYNVLLPKKASGFS 132
SEGSSEI Q NGHNRLLVQRSEVTQAPGQYTVDVEG GCTFIQATLKYNVLLPKKASGFS
Sbjct: 1257 SEGSSEI-QFNGHNRLLVQRSEVTQAPGQYTVDVEGRGCTFIQATLKYNVLLPKKASGFS 1315
Query: 133 LSLEIVKNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEELENKGQV 190
LSLEIVKNYS T FDLTV LKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEE+ N+ +
Sbjct: 1316 LSLEIVKNYSLTVFDLTVNLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEEVNNRSLI 1373
>gi|239744557 PREDICTED: hypothetical protein LOC728715 [Homo
sapiens]
Length = 95
Score = 191 bits (485), Expect = 5e-49
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 163 MVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN 222
MVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN
Sbjct: 1 MVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN 60
Query: 223 LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSE 257
LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSE
Sbjct: 61 LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSE 95
>gi|169205183 PREDICTED: similar to hCG38149 [Homo sapiens]
Length = 95
Score = 190 bits (482), Expect = 1e-48
Identities = 94/95 (98%), Positives = 95/95 (100%)
Query: 163 MVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN 222
MVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN
Sbjct: 1 MVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN 60
Query: 223 LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSE 257
LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVS+
Sbjct: 61 LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSQ 95
>gi|239755754 PREDICTED: ovostatin 2 [Homo sapiens]
Length = 164
Score = 158 bits (400), Expect = 4e-39
Identities = 78/97 (80%), Positives = 86/97 (88%)
Query: 161 SSMVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQ 220
SS V + ++S P+++ +LENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQ
Sbjct: 68 SSAVALSFFLISILYPSLTISSKLENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQ 127
Query: 221 SNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSE 257
SNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVS+
Sbjct: 128 SNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSSVSQ 164
>gi|66932947 alpha-2-macroglobulin precursor [Homo sapiens]
Length = 1474
Score = 143 bits (361), Expect = 1e-34
Identities = 74/201 (36%), Positives = 126/201 (62%), Gaps = 7/201 (3%)
Query: 58 SQRGKRGWLSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQAT 117
++ GK +++ +S + S FQV+ +NRLL+Q+ + + PG+Y++ V G GC ++Q +
Sbjct: 1270 TRTGKAAQVTIQSSGTFSSK--FQVDNNNRLLLQQVSLPELPGEYSMKVTGEGCVYLQTS 1327
Query: 118 LKYNVLLPKKASGFSLSLEIVKNY-----SSTAFDLTVTLKYTGIRNKSSMVVIDVKMLS 172
LKYN+L K+ F+L ++ + + T+F +++++ YTG R+ S+M ++DVKM+S
Sbjct: 1328 LKYNILPEKEEFPFALGVQTLPQTCDEPKAHTSFQISLSVSYTGSRSASNMAIVDVKMVS 1387
Query: 173 GFTPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPA 232
GF P +++ LE V +TEV ++HVL YL+ + S F+V Q V +++PA
Sbjct: 1388 GFIPLKPTVKMLERSNHVSRTEVSSNHVLIYLDKVSNQTLSLFFTVLQDVPVRDLKPAIV 1447
Query: 233 MVYDYYEKEEYALAFYNIDSS 253
VYDYYE +E+A+A YN S
Sbjct: 1448 KVYDYYETDEFAIAEYNAPCS 1468
>gi|162809334 pregnancy-zone protein [Homo sapiens]
Length = 1482
Score = 141 bits (355), Expect = 6e-34
Identities = 75/195 (38%), Positives = 119/195 (61%), Gaps = 5/195 (2%)
Query: 68 VSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKYNVLLPKK 127
V+ S+ S FQV+ +N LL+Q+ + + PG+Y + V G C ++Q ++KYN+L K+
Sbjct: 1284 VTVQDSQTFSTNFQVDNNNLLLLQQISLPELPGEYVITVTGERCVYLQTSMKYNILPEKE 1343
Query: 128 ASGFSLSLEIVK-----NYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIE 182
S F+L ++ V + + T+F +++T+ YTG R S+MV++DVKM+SGF P +++
Sbjct: 1344 DSPFALKVQTVPQTCDGHKAHTSFQISLTISYTGNRPASNMVIVDVKMVSGFIPLKPTVK 1403
Query: 183 ELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEE 242
LE V +TEV N+HVL Y+E + SF F V Q V +++PA VYDYYE +E
Sbjct: 1404 MLERSSSVSRTEVSNNHVLIYVEQVTNQTLSFSFMVLQDIPVGDLKPAIVKVYDYYETDE 1463
Query: 243 YALAFYNIDSSSVSE 257
+A Y S+ +E
Sbjct: 1464 SVVAEYIAPCSTDTE 1478
>gi|74271845 alpha-2-macroglobulin-like 1 [Homo sapiens]
Length = 1454
Score = 122 bits (307), Expect = 2e-28
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 5/189 (2%)
Query: 66 LSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKYNVLLP 125
+++ +E F + NRL+ Q+ + PG YT++ G GC ++Q L+YN+L P
Sbjct: 1262 INLVVKSTENFQRTFNIQSVNRLVFQQDTLPNVPGMYTLEASGQGCVYVQTVLRYNILPP 1321
Query: 126 KKASGFSLSLEIVKNY-----SSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSS 180
FSLS+EI K S + LT+ Y G R+ S+M +++VKMLSGF+P +
Sbjct: 1322 TNMKTFSLSVEIGKARCEQPTSPRSLTLTIHTSYVGSRSSSNMAIVEVKMLSGFSPMEGT 1381
Query: 181 IEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEK 240
+ L + V K E D + YL+ ++ F++ QS LV N++PA VYDYY
Sbjct: 1382 NQLLLQQPLVKKVEFGTDTLNIYLDELIKNTQTYTFTISQSVLVTNLKPATIKVYDYYLP 1441
Query: 241 EEYALAFYN 249
+E A Y+
Sbjct: 1442 DEQATIQYS 1450
>gi|227430303 CD109 antigen isoform 3 precursor [Homo sapiens]
Length = 1368
Score = 57.4 bits (137), Expect = 1e-08
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 80 FQVNGHNRLLVQRSEVTQA-PGQYTVDVEGHGCTFIQATLKYNVLLPKKASGFSLSLEIV 138
F ++ HNRLL+Q +E+ P + G G Q + YNV KASG S +
Sbjct: 1143 FLIDTHNRLLLQTAELAVVQPTAVNISANGFGFAICQLNVVYNV----KASGSSRRRRSI 1198
Query: 139 KNYSSTAFDLTVTLK----------------YTGIRNKSSMVVIDVKMLSGFTPTMSSIE 182
+N AFDL V +K ++G +S M +++V +LSGF +I
Sbjct: 1199 QNQE--AFDLDVAVKENKDDLNHVDLNVCTSFSG-PGRSGMALMEVNLLSGFMVPSEAIS 1255
Query: 183 ELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEE 242
E V K E + + YL++ ++ V N Q A + DYYE
Sbjct: 1256 LSET---VKKVEYDHGKLNLYLDSVNETQFCVNIPAVRNFKVSNTQDASVSIVDYYEPRR 1312
Query: 243 YALAFYN 249
A+ YN
Sbjct: 1313 QAVRSYN 1319
>gi|115529484 CD109 antigen isoform 1 precursor [Homo sapiens]
Length = 1445
Score = 57.4 bits (137), Expect = 1e-08
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 80 FQVNGHNRLLVQRSEVTQA-PGQYTVDVEGHGCTFIQATLKYNVLLPKKASGFSLSLEIV 138
F ++ HNRLL+Q +E+ P + G G Q + YNV KASG S +
Sbjct: 1220 FLIDTHNRLLLQTAELAVVQPTAVNISANGFGFAICQLNVVYNV----KASGSSRRRRSI 1275
Query: 139 KNYSSTAFDLTVTLK----------------YTGIRNKSSMVVIDVKMLSGFTPTMSSIE 182
+N AFDL V +K ++G +S M +++V +LSGF +I
Sbjct: 1276 QNQE--AFDLDVAVKENKDDLNHVDLNVCTSFSG-PGRSGMALMEVNLLSGFMVPSEAIS 1332
Query: 183 ELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEE 242
E V K E + + YL++ ++ V N Q A + DYYE
Sbjct: 1333 LSET---VKKVEYDHGKLNLYLDSVNETQFCVNIPAVRNFKVSNTQDASVSIVDYYEPRR 1389
Query: 243 YALAFYN 249
A+ YN
Sbjct: 1390 QAVRSYN 1396
>gi|118600977 C3 and PZP-like, alpha-2-macroglobulin domain containing
8 [Homo sapiens]
Length = 1932
Score = 55.1 bits (131), Expect = 6e-08
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 66 LSVS-ASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKYNVLL 124
L+VS AS + E F+++ N+ ++Q + + P V +G GC +Q + YNV
Sbjct: 1487 LTVSLASTNLDYQETFELHRTNQKVLQTAAIPSLPTGLFVSAKGDGCCLMQIDVTYNVPD 1546
Query: 125 PKKASGFSLSLEIVK----------------------------------NYSSTAFDLTV 150
P F L + + + ++ L V
Sbjct: 1547 PVAKPAFQLLVSLQEPEAQGRPPPMPASAAEGSRGDWPPADDDDPAADQHHQEYKVMLEV 1606
Query: 151 TLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEELE-NKGQVMKT-EVKNDHVLFYLENGF 208
++ S+M V++V +LSGF + S+E+L +K MK EV VLFY +
Sbjct: 1607 CTRWLHA-GSSNMAVLEVPLLSGFRADIESLEQLLLDKHMGMKRYEVAGRRVLFYFDEIP 1665
Query: 209 GRA-DSFPFSVEQSNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSS 254
R F + +V P VYDYYE A FYN+ + S
Sbjct: 1666 SRCLTCVRFRALRECVVGRTSALPVSVYDYYEPAFEATRFYNVSTHS 1712
>gi|169206162 PREDICTED: hypothetical protein [Homo sapiens]
Length = 120
Score = 54.3 bits (129), Expect = 1e-07
Identities = 36/72 (50%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 1 MAVLRHGGEEELALILQ-VGAKDLRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDPKSQ 59
M VLR GE LAL + VG GG G + G LS L G P D PKSQ
Sbjct: 1 MGVLRARGEVGLALSPRLVGGASPPCDGGPESRGRKRGCLLSPCLVGVASPSCDDGPKSQ 60
Query: 60 RGKRGWLSVSAS 71
RGKRGWLSV AS
Sbjct: 61 RGKRGWLSVPAS 72
Score = 30.4 bits (67), Expect = 1.6
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 23 LRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDPKSQRGKRGWL 66
LR RGG G GG PP DG P+S+ KRG L
Sbjct: 84 LRSRGG-------RGAGSQSPPRGGCLPPCDGGPESRERKRGCL 120
>gi|67190748 complement component 4A preproprotein [Homo sapiens]
Length = 1744
Score = 52.8 bits (125), Expect = 3e-07
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 149 TVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEELENKGQ--VMKTEVKNDHVLFYLEN 206
TV + G S M + DV +LSGF + +E+L + V E + HVL Y ++
Sbjct: 1469 TVCIWRNGKVGLSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHVLLYFDS 1528
Query: 207 GFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSS 254
+ F Q V +QPA A +YDYY E FY S S
Sbjct: 1529 VPTSRECVGFEAVQEVPVGLVQPASATLYDYYNPERRCSVFYGAPSKS 1576
>gi|178557739 complement component 4B preproprotein [Homo sapiens]
Length = 1744
Score = 52.8 bits (125), Expect = 3e-07
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 149 TVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEELENKGQ--VMKTEVKNDHVLFYLEN 206
TV + G S M + DV +LSGF + +E+L + V E + HVL Y ++
Sbjct: 1469 TVCIWRNGKVGLSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHVLLYFDS 1528
Query: 207 GFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSS 254
+ F Q V +QPA A +YDYY E FY S S
Sbjct: 1529 VPTSRECVGFEAVQEVPVGLVQPASATLYDYYNPERRCSVFYGAPSKS 1576
>gi|239758130 PREDICTED: similar to complement component 4B (Childo
blood group), partial [Homo sapiens]
Length = 666
Score = 52.8 bits (125), Expect = 3e-07
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 149 TVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEELENKGQ--VMKTEVKNDHVLFYLEN 206
TV + G S M + DV +LSGF + +E+L + V E + HVL Y ++
Sbjct: 391 TVCIWRNGKVGLSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHVLLYFDS 450
Query: 207 GFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSS 254
+ F Q V +QPA A +YDYY E FY S S
Sbjct: 451 VPTSRECVGFEAVQEVPVGLVQPASATLYDYYNPERRCSVFYGAPSKS 498
>gi|239740684 PREDICTED: similar to C4A protein isoform 1 [Homo
sapiens]
Length = 1744
Score = 52.8 bits (125), Expect = 3e-07
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 149 TVTLKYTGIRNKSSMVVIDVKMLSGFTPTMSSIEELENKGQ--VMKTEVKNDHVLFYLEN 206
TV + G S M + DV +LSGF + +E+L + V E + HVL Y ++
Sbjct: 1469 TVCIWRNGKVGLSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHVLLYFDS 1528
Query: 207 GFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEEYALAFYNIDSSS 254
+ F Q V +QPA A +YDYY E FY S S
Sbjct: 1529 VPTSRECVGFEAVQEVPVGLVQPASATLYDYYNPERRCSVFYGAPSKS 1576
>gi|115298678 complement component 3 precursor [Homo sapiens]
Length = 1663
Score = 51.6 bits (122), Expect = 7e-07
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 66 LSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKYNVLLP 125
L VS SS+I + RSE T+ +TV EG G + Y+
Sbjct: 1294 LDVSLQLPSRSSKITHRIHWESASLLRSEETKENEGFTVTAEGKGQGTLSVVTMYHAKAK 1353
Query: 126 KKASGFSLSLEIV----------KNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFT 175
+ + L++ + L + +Y G ++ ++M ++D+ M++GF
Sbjct: 1354 DQLTCNKFDLKVTIKPAPETEKRPQDAKNTMILEICTRYRGDQD-ATMSILDISMMTGFA 1412
Query: 176 PTMSSIEELEN-------KGQVMKTEVKNDHVLFYLEN-GFGRADSFPFSVEQSNLVFNI 227
P +++L N K ++ K + ++ YL+ D F V Q V I
Sbjct: 1413 PDTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDKVSHSEDDCLAFKVHQYFNVELI 1472
Query: 228 QPAPAMVYDYYEKEEYALAFYN 249
QP VY YY EE FY+
Sbjct: 1473 QPGAVKVYAYYNLEESCTRFYH 1494
>gi|169214179 PREDICTED: similar to complement component 3 [Homo
sapiens]
Length = 390
Score = 51.6 bits (122), Expect = 7e-07
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 66 LSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATLKYNVLLP 125
L VS SS+I + RSE T+ +TV EG G + Y+
Sbjct: 21 LDVSLQLPSRSSKITHRIHWESASLLRSEETKENEGFTVTAEGKGQGTLSVVTMYHAKAK 80
Query: 126 KKASGFSLSLEIV----------KNYSSTAFDLTVTLKYTGIRNKSSMVVIDVKMLSGFT 175
+ + L++ + L + +Y G ++ ++M ++D+ M++GF
Sbjct: 81 DQLTCNKFDLKVTIKPAPETEKRPQDAKNTMILEICTRYRGDQD-ATMSILDISMMTGFA 139
Query: 176 PTMSSIEELEN-------KGQVMKTEVKNDHVLFYLEN-GFGRADSFPFSVEQSNLVFNI 227
P +++L N K ++ K + ++ YL+ D F V Q V I
Sbjct: 140 PDTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDKVSHSEDDCLAFKVHQYFNVELI 199
Query: 228 QPAPAMVYDYYEKEEYALAFYN 249
QP VY YY EE FY+
Sbjct: 200 QPGAVKVYAYYNLEESCTRFYH 221
>gi|239756028 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 49.7 bits (117), Expect = 3e-06
Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 7 GGEEELALILQVGAKDLRIRGGGPQPGGEEG-LALSQQLAGGVFPPYDGDPKSQRGKRGW 65
GG + L G R GG GG+ G L++ GG P DG PKSQ GK GW
Sbjct: 60 GGRGAGSQSLPRGGASARCDGGPKSQGGKRGWLSVPSLPRGGASPQCDGGPKSQGGKSGW 119
Query: 66 LSVSASR 72
LSV ASR
Sbjct: 120 LSVPASR 126
Score = 40.4 bits (93), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (55%)
Query: 34 GEEGLALSQQLAGGVFPPYDGDPKSQRGKRGWLSVSAS 71
G G+ G P DG PKSQ GKRGWLSV AS
Sbjct: 170 GGRGVGSESPPRWGCLPTCDGGPKSQGGKRGWLSVPAS 207
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/56 (48%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 23 LRIRGGGPQPGGEEGLALSQQLA-GGVFPPYDGDPKSQRGKRGWLSVSASRSEGSS 77
L+ RGG G G SQ L GG DG PKSQ GKRGWLSV + G+S
Sbjct: 51 LKARGGRAWGGRGAG---SQSLPRGGASARCDGGPKSQGGKRGWLSVPSLPRGGAS 103
Score = 36.2 bits (82), Expect = 0.029
Identities = 23/42 (54%), Positives = 24/42 (57%), Gaps = 8/42 (19%)
Query: 23 LRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDPKSQRGKRG 64
LR RGG G+ALS L GG P DGDPKS RG RG
Sbjct: 219 LRARGG-------RGVALSPYLMGGASPRCDGDPKS-RGGRG 252
Score = 34.7 bits (78), Expect = 0.084
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 47 GVFPPYDGDPKSQRGKRGWLSVSAS 71
G PP G PKSQ GK GW S++AS
Sbjct: 15 GASPPGIGGPKSQWGKSGWFSIAAS 39
>gi|227430301 CD109 antigen isoform 2 precursor [Homo sapiens]
Length = 1428
Score = 45.4 bits (106), Expect = 5e-05
Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 26/167 (15%)
Query: 99 PGQYTVDVEGHGCTFIQATLKYNVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLK----- 153
P + G G Q + YNV KASG S ++N AFDL V +K
Sbjct: 1223 PTAVNISANGFGFAICQLNVVYNV----KASGSSRRRRSIQNQE--AFDLDVAVKENKDD 1276
Query: 154 -----------YTGIRNKSSMVVIDVKMLSGFTPTMSSIEELENKGQVMKTEVKNDHVLF 202
++G +S M +++V +LSGF +I E V K E + +
Sbjct: 1277 LNHVDLNVCTSFSG-PGRSGMALMEVNLLSGFMVPSEAISLSET---VKKVEYDHGKLNL 1332
Query: 203 YLENGFGRADSFPFSVEQSNLVFNIQPAPAMVYDYYEKEEYALAFYN 249
YL++ ++ V N Q A + DYYE A+ YN
Sbjct: 1333 YLDSVNETQFCVNIPAVRNFKVSNTQDASVSIVDYYEPRRQAVRSYN 1379
>gi|239740686 PREDICTED: similar to C4A protein isoform 2 [Homo
sapiens]
Length = 1698
Score = 38.5 bits (88), Expect = 0.006
Identities = 49/212 (23%), Positives = 78/212 (36%), Gaps = 21/212 (9%)
Query: 59 QRGKRGWLSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQYTVDVEGHGCTFIQATL 118
+RG LS S R+ S Q+N ++ + V V G+ ++
Sbjct: 1324 ERGLNVTLS-STGRNGFKSHALQLNNRQIRGLEEELQFSLGSKINVKVGGNSKGTLKVLR 1382
Query: 119 KYNVLLPKKASGFSLSLEIVKN----YSSTAFDLTVTLKYTGIRNKSS-----MVVIDVK 169
YNVL K + L +E+ Y+ A + +Y + K V ++
Sbjct: 1383 TYNVLDMKNTTCQDLQIEVTVKGHVEYTMEANEDYEDYEYDELPAKDDPDAPLQPVTPLQ 1442
Query: 170 MLSGF-------TPTMSSIEELENKGQVMKTEVKNDHVLFYLENGFGRADSFPFSVEQSN 222
+ G P ++S+ + V E + HVL Y ++ + F Q
Sbjct: 1443 LFEGRRNRRRREAPKLTSLSDR----YVSHFETEGPHVLLYFDSVPTSRECVGFEAVQEV 1498
Query: 223 LVFNIQPAPAMVYDYYEKEEYALAFYNIDSSS 254
V +QPA A +YDYY E FY S S
Sbjct: 1499 PVGLVQPASATLYDYYNPERRCSVFYGAPSKS 1530
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 30.0 bits (66), Expect = 2.1
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 56 PKSQRGKRGWLSVSASRSEGSSEIFQVNGHN-RLLVQRSEVTQAPGQYTVDV--EGHGCT 112
P + K W SR+ ++E +G N LV+ SE +PGQ ++ + EG
Sbjct: 118 PVNSLEKHSWYHGPVSRN--AAEYLLSSGINGSFLVRESE--SSPGQRSISLRYEGRVYH 173
Query: 113 FIQATLKYNVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTG-IRNKSSMVVIDVKML 171
+ T L S F+ E+V ++S+ A L TL Y RNK
Sbjct: 174 YRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNK----------- 222
Query: 172 SGFTPTMSSIEELENKGQVMKTEVKNDHVL 201
PT+ + +K ++ +T++ H L
Sbjct: 223 ----PTVYGVSPNYDKWEMERTDITMKHKL 248
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 30.0 bits (66), Expect = 2.1
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 23/150 (15%)
Query: 56 PKSQRGKRGWLSVSASRSEGSSEIFQVNGHN-RLLVQRSEVTQAPGQYTVDV--EGHGCT 112
P + K W SR+ ++E +G N LV+ SE +PGQ ++ + EG
Sbjct: 137 PVNSLEKHSWYHGPVSRN--AAEYLLSSGINGSFLVRESE--SSPGQRSISLRYEGRVYH 192
Query: 113 FIQATLKYNVLLPKKASGFSLSLEIVKNYSSTAFDLTVTLKYTG-IRNKSSMVVIDVKML 171
+ T L S F+ E+V ++S+ A L TL Y RNK
Sbjct: 193 YRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNK----------- 241
Query: 172 SGFTPTMSSIEELENKGQVMKTEVKNDHVL 201
PT+ + +K ++ +T++ H L
Sbjct: 242 ----PTVYGVSPNYDKWEMERTDITMKHKL 267
>gi|212276104 leucine rich repeat (in FLII) interacting protein 1
isoform 5 [Homo sapiens]
Length = 752
Score = 30.0 bits (66), Expect = 2.1
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 9 EEELALILQVGAKDLRIRGGGPQPGGE---EGLALSQQLAGGVFPPYDGDPKSQRGKRGW 65
EE LA + +D ++ GP+ GGE EG+A G +PKS+ R
Sbjct: 612 EEVLADGDTLDFEDDTVQSSGPRAGGEELDEGVAKDNAKIDGATQSSPAEPKSEDADRCT 671
Query: 66 LSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQ 101
L S S+ S+ + +R E+++ P Q
Sbjct: 672 LPEHESPSQDISDACEAES-----TERCEMSEHPSQ 702
>gi|212276096 leucine rich repeat (in FLII) interacting protein 1
isoform 3 [Homo sapiens]
Length = 808
Score = 30.0 bits (66), Expect = 2.1
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 9 EEELALILQVGAKDLRIRGGGPQPGGE---EGLALSQQLAGGVFPPYDGDPKSQRGKRGW 65
EE LA + +D ++ GP+ GGE EG+A G +PKS+ R
Sbjct: 668 EEVLADGDTLDFEDDTVQSSGPRAGGEELDEGVAKDNAKIDGATQSSPAEPKSEDADRCT 727
Query: 66 LSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQ 101
L S S+ S+ + +R E+++ P Q
Sbjct: 728 LPEHESPSQDISDACEAES-----TERCEMSEHPSQ 758
>gi|212276070 leucine rich repeat (in FLII) interacting protein 1
isoform 4 [Homo sapiens]
Length = 784
Score = 30.0 bits (66), Expect = 2.1
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 9 EEELALILQVGAKDLRIRGGGPQPGGE---EGLALSQQLAGGVFPPYDGDPKSQRGKRGW 65
EE LA + +D ++ GP+ GGE EG+A G +PKS+ R
Sbjct: 644 EEVLADGDTLDFEDDTVQSSGPRAGGEELDEGVAKDNAKIDGATQSSPAEPKSEDADRCT 703
Query: 66 LSVSASRSEGSSEIFQVNGHNRLLVQRSEVTQAPGQ 101
L S S+ S+ + +R E+++ P Q
Sbjct: 704 LPEHESPSQDISDACEAES-----TERCEMSEHPSQ 734
>gi|39545575 hypothetical protein LOC55924 isoform 2 [Homo
sapiens]
Length = 282
Score = 30.0 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 7 GGEEELALI-LQVGAKDLRIRGGGPQPGGEEG 37
G +EL L+ +Q + L I GGGP PG EG
Sbjct: 23 GALQELKLLQVQTALEQLEISGGGPVPGSPEG 54
>gi|9506861 hypothetical protein LOC55924 isoform 1 [Homo sapiens]
Length = 297
Score = 30.0 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 7 GGEEELALI-LQVGAKDLRIRGGGPQPGGEEG 37
G +EL L+ +Q + L I GGGP PG EG
Sbjct: 38 GALQELKLLQVQTALEQLEISGGGPVPGSPEG 69
>gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo
sapiens]
Length = 390
Score = 29.6 bits (65), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 17 QVGAKDLRIRGGGPQPGGEEGLALSQQLAGGVFPPYDGDP 56
++G++D++ G G + GG G + AGG P GDP
Sbjct: 97 RLGSQDMQALGAGSRAGGVRGGPVGCSEAGGPSPGGPGDP 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,710,033
Number of Sequences: 37866
Number of extensions: 424414
Number of successful extensions: 939
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 893
Number of HSP's gapped (non-prelim): 45
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.