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Search of human proteins with 119226222
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119226222 C2 calcium-dependent domain containing 2 isoform 1
[Homo sapiens]
(696 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119226222 C2 calcium-dependent domain containing 2 isoform 1 ... 1369 0.0
gi|40018638 C2 calcium-dependent domain containing 2 isoform 2 [... 1061 0.0
gi|42716277 transmembrane protein 24 [Homo sapiens] 284 2e-76
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 42 0.003
gi|219802034 nuclear factor related to kappaB binding protein is... 37 0.081
gi|23346420 nuclear factor related to kappaB binding protein iso... 37 0.081
gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens] 37 0.081
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 37 0.081
gi|91982772 mucin 17 [Homo sapiens] 36 0.14
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 35 0.18
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 35 0.31
gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ... 35 0.31
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 35 0.31
gi|148612857 sickle tail isoform 3 [Homo sapiens] 35 0.31
gi|148612813 sickle tail isoform 2 [Homo sapiens] 35 0.31
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 34 0.40
gi|164419758 bromodomain containing 2 [Homo sapiens] 34 0.52
gi|4826806 bromodomain containing 2 [Homo sapiens] 34 0.52
gi|118572603 ubinuclein 1 [Homo sapiens] 33 0.68
gi|118572601 ubinuclein 1 [Homo sapiens] 33 0.68
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 33 0.68
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 33 0.68
gi|210032580 SET domain containing 1B [Homo sapiens] 33 0.68
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 33 0.68
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 33 0.89
gi|20270323 zinc finger protein 653 [Homo sapiens] 33 0.89
gi|191252814 RIMS binding protein 3B [Homo sapiens] 33 1.2
gi|191252806 RIMS binding protein 3C [Homo sapiens] 33 1.2
gi|149944516 tet oncogene family member 3 [Homo sapiens] 33 1.2
gi|148806881 hypothetical protein LOC57608 [Homo sapiens] 33 1.2
>gi|119226222 C2 calcium-dependent domain containing 2 isoform 1
[Homo sapiens]
Length = 696
Score = 1369 bits (3543), Expect = 0.0
Identities = 696/696 (100%), Positives = 696/696 (100%)
Query: 1 MAMARLGSWLGEAQWLALVSLFVAALATVGLYLAQWALARARPQPQRRAVEPGEGPRPGS 60
MAMARLGSWLGEAQWLALVSLFVAALATVGLYLAQWALARARPQPQRRAVEPGEGPRPGS
Sbjct: 1 MAMARLGSWLGEAQWLALVSLFVAALATVGLYLAQWALARARPQPQRRAVEPGEGPRPGS 60
Query: 61 DALLSWILTLGSWRSQWQAAWVTALNEEAERKGGPPFLSFEEDPRQQALELVVQEVSSVL 120
DALLSWILTLGSWRSQWQAAWVTALNEEAERKGGPPFLSFEEDPRQQALELVVQEVSSVL
Sbjct: 61 DALLSWILTLGSWRSQWQAAWVTALNEEAERKGGPPFLSFEEDPRQQALELVVQEVSSVL 120
Query: 121 RSAEEKVVVCHVVGQAIQFLVSETPALGAGCRLYDMRLSPFHLQLEFHMKEKREDLQISW 180
RSAEEKVVVCHVVGQAIQFLVSETPALGAGCRLYDMRLSPFHLQLEFHMKEKREDLQISW
Sbjct: 121 RSAEEKVVVCHVVGQAIQFLVSETPALGAGCRLYDMRLSPFHLQLEFHMKEKREDLQISW 180
Query: 181 SFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDILKHLAGSASPSVVLITKPTTVKEAQ 240
SFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDILKHLAGSASPSVVLITKPTTVKEAQ
Sbjct: 181 SFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDILKHLAGSASPSVVLITKPTTVKEAQ 240
Query: 241 NLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFS 300
NLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFS
Sbjct: 241 NLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFS 300
Query: 301 STLTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQ 360
STLTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQ
Sbjct: 301 STLTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQ 360
Query: 361 SFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTV 420
SFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTV
Sbjct: 361 SFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTV 420
Query: 421 TAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELL 480
TAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELL
Sbjct: 421 TAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELL 480
Query: 481 VLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVD 540
VLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVD
Sbjct: 481 VLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVD 540
Query: 541 STHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLD 600
STHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLD
Sbjct: 541 STHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLD 600
Query: 601 PDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPE 660
PDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPE
Sbjct: 601 PDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPE 660
Query: 661 GSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPCT 696
GSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPCT
Sbjct: 661 GSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPCT 696
>gi|40018638 C2 calcium-dependent domain containing 2 isoform 2
[Homo sapiens]
Length = 541
Score = 1061 bits (2744), Expect = 0.0
Identities = 541/541 (100%), Positives = 541/541 (100%)
Query: 156 MRLSPFHLQLEFHMKEKREDLQISWSFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDI 215
MRLSPFHLQLEFHMKEKREDLQISWSFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDI
Sbjct: 1 MRLSPFHLQLEFHMKEKREDLQISWSFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDI 60
Query: 216 LKHLAGSASPSVVLITKPTTVKEAQNLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLL 275
LKHLAGSASPSVVLITKPTTVKEAQNLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLL
Sbjct: 61 LKHLAGSASPSVVLITKPTTVKEAQNLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLL 120
Query: 276 SEPGASGHINAVCVVQLNDPVQRFSSTLTKNTPDLMWEEEFTFELNAKSKELHLQISEAG 335
SEPGASGHINAVCVVQLNDPVQRFSSTLTKNTPDLMWEEEFTFELNAKSKELHLQISEAG
Sbjct: 121 SEPGASGHINAVCVVQLNDPVQRFSSTLTKNTPDLMWEEEFTFELNAKSKELHLQISEAG 180
Query: 336 RSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPI 395
RSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPI
Sbjct: 181 RSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPI 240
Query: 396 PPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKD 455
PPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKD
Sbjct: 241 PPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKD 300
Query: 456 ISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIII 515
ISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIII
Sbjct: 301 ISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIII 360
Query: 516 SGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQ 575
SGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQ
Sbjct: 361 SGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQ 420
Query: 576 EDELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFF 635
EDELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFF
Sbjct: 421 EDELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFF 480
Query: 636 RRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPC 695
RRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPC
Sbjct: 481 RRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPC 540
Query: 696 T 696
T
Sbjct: 541 T 541
>gi|42716277 transmembrane protein 24 [Homo sapiens]
Length = 707
Score = 284 bits (727), Expect = 2e-76
Identities = 237/732 (32%), Positives = 355/732 (48%), Gaps = 93/732 (12%)
Query: 15 WLALVSLFVAALATVGLYLAQWA----LARAR----PQP--------------------Q 46
W AL+ LF A+L TV +L Q+A LARAR P P +
Sbjct: 12 WAALLILFAASLLTVFAWLLQYARGLWLARARGDRGPGPALAGEPAGSLRELGVWRSLLR 71
Query: 47 RRAVEPGEGPRPGSDALLSWILTLGSWRSQWQAAWVTALNEEAERKGGPPFLSFEEDPRQ 106
RA G PG LL+ + S+R WQ AWV ALNE+A R G ++FEE P Q
Sbjct: 72 LRATRAGAAEEPGVRGLLASLFAFKSFRENWQRAWVRALNEQACRNGSSIQIAFEEVP-Q 130
Query: 107 QALELVVQEVSSVLRSAEEKVVVCHVVGQAIQFLVSETPALGAGCRL--YDMRLSPFHLQ 164
+ V+ V +S V+ C + + ++F VS T A + Y + L+ Q
Sbjct: 131 LPPRASISHVTCVDQSEHTMVLRCQLSAEEVRFPVSVTQQSPAAVSMETYHVTLTLPPTQ 190
Query: 165 LEFHMKE-KREDLQISWSFISVPEMAVNIQPKAL----GEDQVAETSAMSDVLKDILKHL 219
LE +++E E L ISW+F P++++ + PK GE+QV E S + +++KD
Sbjct: 191 LEVNLEEIPGEGLLISWAFTDRPDLSLTVLPKLQARERGEEQV-ELSTIEELIKD----- 244
Query: 220 AGSASPSVVLITKPTTVKEAQNLQCAASTAQESCPPKPPRAHEL-----KLLVRNIHVLL 274
++ T+P + + PP P+A +L +R +
Sbjct: 245 -------AIVSTQPAMMVNLRACSAPGGLVPSEKPPMMPQAQPAIPRPNRLFLRQLRASH 297
Query: 275 LSEPGASGHINAVCVVQLNDPVQRFSSTLTKNTPDLMWEEEFTFELNAKSKELHLQISEA 334
L G CV +L++P+Q+ + + ++ W E+ +L +S+EL L++ +
Sbjct: 298 LGNE-LEGTEELCCVAELDNPMQQKWTKPARAGSEVEWTEDLALDLGPQSRELTLKVLRS 356
Query: 335 GRSSEG-LLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYME--PGEL- 390
+ LL AT+P+ + S Q LT G ++ E Y E P L
Sbjct: 357 SSCGDTELLGQATLPVGSPSRPLSRRQLCPLTPGPGKALGPAATMAVELHYEEGSPRNLG 416
Query: 391 ---KSWPIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPI 447
S P P P KIE DRT+MP GT+VTTVT V+++PR+D G+ DSP ++P
Sbjct: 417 TPTSSTPRPSITPTKKIELDRTIMPDGTIVTTVTTVQSRPRID-GKL-----DSPSRSPS 470
Query: 448 KVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSE-SSKLKLKS 506
KV+V EK +V ++ S P + + SSS + + NG DPVAE AIRQL+E S ++ K+
Sbjct: 471 KVEVTEKTTTV--LSESSGPSNTSHSSSPGDSHLSNGLDPVAETAIRQLTEPSGRVAKKT 528
Query: 507 PRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDA-----PSHP--ERAAASAP 559
P K+ST+IISG+SK ++QD + AL GY AS++++ Q+DA PS P + A S
Sbjct: 529 PTKRSTLIISGVSKVPIAQD-ELALSLGYAASLEASVQDDAGTSGGPSSPPSDPPAMSPG 587
Query: 560 PEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTA 619
P +A S+ S+ + DE D+ + P D E S LE +
Sbjct: 588 PLDALSSPTSVQ---EADETTRSDISERPSV-----------DDIESETGSTGALETRSL 633
Query: 620 KKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKKLLS 679
K HK LR G KL FRRR +QK+ G+SQSH+DL R+K + +R L K+
Sbjct: 634 KDHKVSFLRSGTKLIFRRRPRQKEAGLSQSHDDLSNATATPSVRKKAGSFSRRLIKRFSF 693
Query: 680 RHRNKNTMNGAP 691
+ + K N +P
Sbjct: 694 KSKPKANGNPSP 705
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 41.6 bits (96), Expect = 0.003
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 36/361 (9%)
Query: 314 EEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSS 373
E+ TF N +++ ++ +AG + T++ S S + +S S+ SS
Sbjct: 120 EKLTF--NNPTEDFRRKLLKAGGDPNRSIHTSS------SSSSSSSSSSSSSSSSSSSSS 171
Query: 374 VLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGR 433
S ++ S S P K+ K+ P +A K +P D +
Sbjct: 172 SSSSSSSSSSSSSSSSSSSTSFSKP---HKLMKEHKEKPSKDSREHKSAFK-EPSRDHNK 227
Query: 434 ASPLSSDSPVKT-PIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVA 492
+S SS P + P+K + I ++ + P+SK L + +G D A
Sbjct: 228 SSKESSKKPKENKPLKEEKIVPKMAFK----EPKPMSKEPKPDSNLLTITSGQDKKAPSK 283
Query: 493 IRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPE 552
+S+S +L K RKKS S +L + +A T S D +D SH +
Sbjct: 284 RPPISDSEELSAKK-RKKS-------SSEALFKSFSSAPPLILTCSADKKQIKD-KSHVK 334
Query: 553 RAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMS 612
E +E +++L P + + D+E+ + + S Q P S SS S
Sbjct: 335 MGKVKIESETSEKKKSTLPPFDDIVDPNDSDVEENISSKSDSEQ----PSPASSSSSSSS 390
Query: 613 VLEPGTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQP---EGSRRKGITL 669
P ++ G LR K ++++ + + ND +E+P GSR + ++L
Sbjct: 391 SFTPSQTRQQ--GPLRSIMKDLHSDDNEEESDEVEDNDNDSE-MERPVNRGGSRSRRVSL 447
Query: 670 T 670
+
Sbjct: 448 S 448
>gi|219802034 nuclear factor related to kappaB binding protein
isoform 1 [Homo sapiens]
Length = 1299
Score = 36.6 bits (83), Expect = 0.081
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 14/239 (5%)
Query: 243 QCAASTAQESCPPKPPRAHELKLLVRNIHVLLLSE-PGASGHINAVCVVQLNDPVQRFSS 301
Q AA+ A+++ KP ++K + + +LS P ++ PV +
Sbjct: 666 QAAAAKARKALQQKPKPPSKVKSSSKESSIKVLSSGPSEQSQMSLSDSSMPPTPV----T 721
Query: 302 TLTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQS 361
+T TP L ++A +K +SE +SS G+L ++ + S S
Sbjct: 722 PVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGTMLSPASS 781
Query: 362 FTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTV--MPCG---TV 416
T S A V S +A S + + + P P VP +T+ MP G V
Sbjct: 782 QTAPSSQAAARVVSHSGSAGLSQV---RVVAQPSLPAVPQQSGGPAQTLPQMPAGPQIRV 838
Query: 417 VTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSS 475
T T K P+ V P+ + + T + + ++V ++ ++PVSK +SS
Sbjct: 839 PATATQTKVVPQT-VMATVPVKAQTTAATVQRPGPGQTGLTVTSLPATASPVSKPATSS 896
>gi|23346420 nuclear factor related to kappaB binding protein
isoform 2 [Homo sapiens]
Length = 1324
Score = 36.6 bits (83), Expect = 0.081
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 14/239 (5%)
Query: 243 QCAASTAQESCPPKPPRAHELKLLVRNIHVLLLSE-PGASGHINAVCVVQLNDPVQRFSS 301
Q AA+ A+++ KP ++K + + +LS P ++ PV +
Sbjct: 691 QAAAAKARKALQQKPKPPSKVKSSSKESSIKVLSSGPSEQSQMSLSDSSMPPTPV----T 746
Query: 302 TLTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQS 361
+T TP L ++A +K +SE +SS G+L ++ + S S
Sbjct: 747 PVTPTTPALPAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGTMLSPASS 806
Query: 362 FTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTV--MPCG---TV 416
T S A V S +A S + + + P P VP +T+ MP G V
Sbjct: 807 QTAPSSQAAARVVSHSGSAGLSQV---RVVAQPSLPAVPQQSGGPAQTLPQMPAGPQIRV 863
Query: 417 VTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSS 475
T T K P+ V P+ + + T + + ++V ++ ++PVSK +SS
Sbjct: 864 PATATQTKVVPQT-VMATVPVKAQTTAATVQRPGPGQTGLTVTSLPATASPVSKPATSS 921
>gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens]
Length = 552
Score = 36.6 bits (83), Expect = 0.081
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 543 HQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVL---- 598
H ++ P HPE+ P E S P P+ED S P+ ++S L
Sbjct: 382 HPKEEPKHPEKEQQEGVPNSDEGYWDSTTPGPEEDSSSSGKKAGIPR-DSYSGDALYDLY 440
Query: 599 LDPDG---------DELSESSMSVLEPG-----TAKKHKGGILRKGAKLFFRRRHQQKDP 644
DPDG D SS+S L+P T G L K +K+ +H P
Sbjct: 441 ADPDGSPATLPGGKDNEETSSLSRLKPVSPGTITCPLRTPGSLLKDSKIPISIKHLTNLP 500
Query: 645 GMSQSHNDLVFLEQPEGSR--RKGITLTRILNKKLLSR 680
SH V +QP S R I ++++L +++ +R
Sbjct: 501 ---SSHP--VVHQQPSRSEMPRTKIPVSKVLVRRVSNR 533
>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
Length = 671
Score = 36.6 bits (83), Expect = 0.081
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 543 HQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVL---- 598
H ++ P HPE+ P E S P P+ED S P+ ++S L
Sbjct: 501 HPKEEPKHPEKEQQEGVPNSDEGYWDSTTPGPEEDSSSSGKKAGIPR-DSYSGDALYDLY 559
Query: 599 LDPDG---------DELSESSMSVLEPG-----TAKKHKGGILRKGAKLFFRRRHQQKDP 644
DPDG D SS+S L+P T G L K +K+ +H P
Sbjct: 560 ADPDGSPATLPGGKDNEETSSLSRLKPVSPGTITCPLRTPGSLLKDSKIPISIKHLTNLP 619
Query: 645 GMSQSHNDLVFLEQPEGSR--RKGITLTRILNKKLLSR 680
SH V +QP S R I ++++L +++ +R
Sbjct: 620 ---SSHP--VVHQQPSRSEMPRTKIPVSKVLVRRVSNR 652
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 35.8 bits (81), Expect = 0.14
Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 40/284 (14%)
Query: 338 SEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPP 397
SEG ++P+ + P++ TL++ +S + + T S P E S PI
Sbjct: 3042 SEGSTPLTSIPVST--TPVAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPIST 3099
Query: 398 ----------------PVPAAKIEK-DRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSD 440
PV ++ I T + T VTT T + P G + P S+
Sbjct: 3100 YSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTP 3159
Query: 441 SPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSS--DTELLVLNGSDPVAEVAIRQLSE 498
S TP+ + + V + TLS++ DT V ++ + +E
Sbjct: 3160 SEGSTPLTYMPVSTMLVVSS-------EDSTLSATPVDTSTPVTTSTEATSSTT----AE 3208
Query: 499 SSKLKLKSPRKKSTIIIS-GISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAAS 557
+ + +P + T + S +S T ++ + L T VDS + P A+S
Sbjct: 3209 GTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILS---TTPVDS----NTPLTTSTEASS 3261
Query: 558 APPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDP 601
+PP ++ + P L S + A++ +S + P
Sbjct: 3262 SPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTP 3305
Score = 34.3 bits (77), Expect = 0.40
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 38/240 (15%)
Query: 332 SEAGRSSEGLLATATVPLDLFKKQPSGPQS----FTLTSGSACGSSVLGSV---TAEFSY 384
SEAG S + T+T P+ K S P + S ++ GS++L S+ T +
Sbjct: 2825 SEAGTLSTTPVDTST-PVTTSTKASSSPTTAEGIVVPISTASEGSTLLTSIPVSTTPVAS 2883
Query: 385 MEPGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVK 444
E L + P+ +P VTT T + P G + P+S+ S V
Sbjct: 2884 SEASTLSTTPVDTSIP----------------VTTSTEGSSSPTTAEGTSMPISTPSEVS 2927
Query: 445 TPIKVKVIEKDISVQAIACRSAPVSKTLSSS--DTELLVLNGSDPVAEVAIRQLSESSKL 502
TP+ I V + + S TLS++ DT V ++ + +E + +
Sbjct: 2928 TPL------TSILVSTVPVAGSEAS-TLSTTPVDTRTPVTTSAEASSSPT---TAEGTSM 2977
Query: 503 KLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTA--SVDSTHQEDAPSHPERAAASAPP 560
+ +P ++ T + S T +A+ + A S T +A S P A + P
Sbjct: 2978 PISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSSPTTAEGTGIP 3037
Score = 33.5 bits (75), Expect = 0.68
Identities = 87/405 (21%), Positives = 141/405 (34%), Gaps = 58/405 (14%)
Query: 184 SVPEMAVNIQPKALGEDQVAETSAMSDVLKDILKHLAGSASPSVVLITKPTTVKEAQNLQ 243
S P VN P + + ++MS + A + S + V + P T +
Sbjct: 492 SPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVDTSTPVTTSSEAS-- 549
Query: 244 CAASTAQE--SCPPKPPRAHELKLLVRNIHVLLL--SEPGASGHINAVCVVQLNDPVQRF 299
++ST E S P P L + L+ SE + A + +
Sbjct: 550 -SSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPADSNTFVTTSSEAS 608
Query: 300 SSTLTK---NTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQP 356
SS+ T + P + E T + + SEA S T P+D
Sbjct: 609 SSSTTAEGTSMPTSTYSERGTTITSMSVSTTLVASSEASTLS-------TTPVD------ 655
Query: 357 SGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGE-LKSWPIPPPVPAAKIEKDRTVMPC-- 413
S T T ++ ++ G+ +Y E L S P+ + A+ + P
Sbjct: 656 SNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLSTTPVDT 715
Query: 414 GTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKT-L 472
T VTT T + P G + P S+ S TP+ S PVSKT L
Sbjct: 716 STPVTTSTEASSSPTTADGASMPTSTPSEGSTPL----------------TSMPVSKTLL 759
Query: 473 SSSDTELLVLNGSDPVAEVAIR-------QLSESSKLKLKSPRKKSTIIIS-GISKTSLS 524
+SS+ L D + +E + + + +P + S ++ S +S T ++
Sbjct: 760 TSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVT 819
Query: 525 QDHDAALMQGYTASVDS----THQEDAPSHPERAAASAPPEEAES 565
+ L T VDS T + S P A ++ P S
Sbjct: 820 SPEASTLS---TTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYS 861
Score = 33.1 bits (74), Expect = 0.89
Identities = 75/361 (20%), Positives = 122/361 (33%), Gaps = 42/361 (11%)
Query: 203 AETSAMSDVLKDILKHLAGSASPSVVLITKPTTVKEAQNLQCAASTAQESCPPKPPRAHE 262
+E S +S D H+ S S PTT + ST E P
Sbjct: 762 SEASTLSTTPLDTSTHITTSTEASC----SPTTT---EGTSMPISTPSEGSP-------- 806
Query: 263 LKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFSSTLTKNTPDLMWEEEFTFELNA 322
L+ +I V + + V N PV + + TP +
Sbjct: 807 ---LLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEG 863
Query: 323 KSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEF 382
++ + +S ++ + +T P+D S +T+ + SS S
Sbjct: 864 RTPLTSMPVSTTLVATSAISTLSTTPVDT---------STPVTNSTEARSSPTTSEGTSM 914
Query: 383 SYMEPGE----LKSWP--IPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASP 436
PGE L S P P V + T + T VTT T + P G + P
Sbjct: 915 PTSTPGEGSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIP 974
Query: 437 LSSDSPVKTPIKVKVIEKDI--SVQAIACRSAPV-SKTLSSSDTELLVLNGSDPVAE--- 490
S+ S TP+ + + + +A + PV S T ++ TE + P AE
Sbjct: 975 TSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTE---ASSPPPTAEGTS 1031
Query: 491 VAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSH 550
+ SE S + P + + S S S + + + Y+ + S+ D S
Sbjct: 1032 MPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTTADGTSM 1091
Query: 551 P 551
P
Sbjct: 1092 P 1092
Score = 32.7 bits (73), Expect = 1.2
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 20/210 (9%)
Query: 415 TVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSS 474
T+VTT T + P G + P S+ TP+ ++ + + A TLS+
Sbjct: 2662 TLVTTSTGTSSSPTTAEGSSMPTSTPGERSTPLTNILVSTTLLANSEA-------STLST 2714
Query: 475 S--DTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALM 532
+ DT V ++ + +E + +++ +P ST + S + T +A+ +
Sbjct: 2715 TPVDTSTPVTTSAEASSSPT---TAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTV 2771
Query: 533 QGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAA 592
T +VD++ P A+S+P ++ + P L S + P A++
Sbjct: 2772 S--TTAVDTS----IPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASS 2825
Query: 593 WSSQVLLDP--DGDELSESSMSVLEPGTAK 620
+ + P ++ S+ + P TA+
Sbjct: 2826 EAGTLSTTPVDTSTPVTTSTKASSSPTTAE 2855
Score = 32.3 bits (72), Expect = 1.5
Identities = 78/355 (21%), Positives = 124/355 (34%), Gaps = 41/355 (11%)
Query: 293 NDPVQRFSST-LTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDL 351
N V S+T + NTP E + A+ + S G + + +T +
Sbjct: 2293 NSEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVAS 2352
Query: 352 FKKQP----SGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIP---------PP 398
F+ S +T+ S GSS TA+ + M P P
Sbjct: 2353 FETSTLSTTPADTSTPVTTYSQAGSS---PTTADDTSMPTSTYSEGSTPLTSVPVSTMPV 2409
Query: 399 VPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKD--I 456
V + T + T VTT T + P G + P S S TP+ + +
Sbjct: 2410 VSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVV 2469
Query: 457 SVQAIACRSAPV-SKTLSSSDTELLVLNGSDPVAE---VAIRQLSESSKLKLKSPRKKST 512
S +A + PV + T ++ TE + S AE V I SE S L P +
Sbjct: 2470 SSEAGTLSTTPVDTSTPMTTSTE---ASSSPTTAEDIVVPISTASEGSTLLTSIPVSTTP 2526
Query: 513 II---ISGISKTSLSQDHDAALMQGYTASVDSTHQEDAP-------SHPERAAASAPPEE 562
+ S +S T + + ++S S P S P R+ +
Sbjct: 2527 VASPEASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKPL 2586
Query: 563 AESAQASLAPKPQEDEL---DSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVL 614
A S ++L+ P + + S + P A +S + P E+S S S+L
Sbjct: 2587 ASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPISTP--SEVSTSLTSIL 2639
Score = 32.0 bits (71), Expect = 2.0
Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 24/245 (9%)
Query: 343 ATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAA 402
A + P+ + + S P A G+S+ S +E S P S+ P V +
Sbjct: 3306 ADTSTPVTTYSQASSSPPI-------ADGTSMPTSTYSEGS--TPLTNMSFSTTPVVSSE 3356
Query: 403 KIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKD--ISVQA 460
T + T VTT T P G + P SS S TP+ + +S +
Sbjct: 3357 ASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEV 3416
Query: 461 IACRSAPV-SKTLSSSDTE------------LLVLNGSDPVAEVAIRQLSESSKLKLKSP 507
+ PV S TL ++ TE L S+ ++I LS + ++
Sbjct: 3417 NTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEAS 3476
Query: 508 RKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQ 567
+T + + T+ S + + T+ ST E + ++ P +E++
Sbjct: 3477 TLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEAST 3536
Query: 568 ASLAP 572
S P
Sbjct: 3537 LSTTP 3541
Score = 31.2 bits (69), Expect = 3.4
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 21/243 (8%)
Query: 329 LQISEAGRSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPG 388
+ +S+ +S +T PLD T ++ ++C + + S G
Sbjct: 752 MPVSKTLLTSSEASTLSTTPLDT-------STHITTSTEASCSPTTTEGTSMPISTPSEG 804
Query: 389 E--LKSWPIP-PPVPAAKIEK-DRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVK 444
L S P+ PV + + T + + VTT T V + P G + P S+ S +
Sbjct: 805 SPLLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGR 864
Query: 445 TPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKL 504
TP+ + + SA + + + DT V N ++ + SE + +
Sbjct: 865 TPLTSMPVS-----TTLVATSAISTLSTTPVDTSTPVTNSTEARSSPT---TSEGTSMPT 916
Query: 505 KSPRKKSTIIISGISKTSLSQDHDAALMQG--YTASVDSTHQEDAPSHPERAAASAPPEE 562
+P + ST + S T+ +A + S T +A S P A ++ P
Sbjct: 917 STPGEGSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTS 976
Query: 563 AES 565
S
Sbjct: 977 TPS 979
Score = 31.2 bits (69), Expect = 3.4
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 25/219 (11%)
Query: 363 TLTSGSACGSSVLGSVTAEFSYMEPGE-LKSWPIPPPVPAAKIEKDRTVMPCGTV--VTT 419
T + S+ ++ G+ +Y E L S P+ + + + P T VTT
Sbjct: 1075 TYSQASSSSTTADGTSMPTSTYSEGSTPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTT 1134
Query: 420 VTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKD--ISVQAIACRSAPV-SKTLSSSD 476
T + P G + P S S TP+ + +S +A + PV SKT ++
Sbjct: 1135 STEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTLVVSSEANTLSTTPVDSKTQVATS 1194
Query: 477 TELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIIS-GISKTSLSQDHDAALMQGY 535
TE + P AEV + + +P ++ST + S + T ++ + L
Sbjct: 1195 TE---ASSPPPTAEV--------TSMPTSTPGERSTPLTSMPVRHTPVASSEASTLS--- 1240
Query: 536 TASVDS----THQEDAPSHPERAAASAPPEEAESAQASL 570
T+ VD+ T + S P A ++ P S ++L
Sbjct: 1241 TSPVDTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGSTL 1279
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 35.4 bits (80), Expect = 0.18
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 14/205 (6%)
Query: 424 KTKPRVDVGRASPLSSDSPVK----TPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTEL 479
K K V SP + SPVK TP K K K+ + +S +KTL E
Sbjct: 707 KAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPE- 765
Query: 480 LVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQ-GYTAS 538
P E A R ++ K KSP K+ + +K+ L +D A +
Sbjct: 766 ----AKTPAKEEA-RSPADKFPEKAKSPVKEE-VKSPEKAKSPLKEDAKAPEKEIPKKEE 819
Query: 539 VDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVL 598
V S +E+ P+ PP++AE +A PK +E + + + +A +
Sbjct: 820 VKSPVKEE--EKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEK 877
Query: 599 LDPDGDELSESSMSVLEPGTAKKHK 623
+P ++ ES + + K K
Sbjct: 878 KEPAVEKPKESKVEAKKEEAEDKKK 902
Score = 29.6 bits (65), Expect = 9.9
Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 19/193 (9%)
Query: 424 KTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLN 483
K K V SP + SPVK K K +PV + S +
Sbjct: 665 KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAK-----------SPVKEEAKSPE------K 707
Query: 484 GSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTH 543
PV E A + E +K +K K S + + + S + + + T V S
Sbjct: 708 AKSPVKEEA--KSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPE 765
Query: 544 QEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDG 603
+ R+ A PE+A+S P++ + + K P+ + + P
Sbjct: 766 AKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVK 825
Query: 604 DELSESSMSVLEP 616
+E + V EP
Sbjct: 826 EEEKPQEVKVKEP 838
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 34.7 bits (78), Expect = 0.31
Identities = 73/315 (23%), Positives = 110/315 (34%), Gaps = 39/315 (12%)
Query: 397 PPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRAS-PLSSDSPVKTPIKVKVIEKD 455
PP P A KD V PC A P D+ PL P+ T + I++
Sbjct: 753 PPGPDAPPSKD--VPPCQE---PPPAQDLSPCQDLPAGQEPLPHQDPLLTK-DLPAIQES 806
Query: 456 ISVQAIACRSAPVSK-----------TLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKL 504
+ C+ P S+ T+SS D LL G P A R +++L
Sbjct: 807 PTRDLPPCQDLPPSQVSLPAKALTEDTMSSGD--LLAATGDPPAAP---RPAFVIPEVRL 861
Query: 505 KSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAA--SAPPEE 562
S + G S + + +G D ++ ER+ A S+ E
Sbjct: 862 DSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIET 921
Query: 563 AESAQASLAPKPQED----ELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGT 618
+ A+ L+ + Q L +EP+ ++S L E + S+ + P T
Sbjct: 922 GQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPST 981
Query: 619 AKKHKG--GILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKK 676
KK G G LFF + S D V + +RK L + + K
Sbjct: 982 LKKELGRNGGSMHHLSLFFTGHRK-------MSGADTVGDDDEASRKRKSKNLAKDMKNK 1034
Query: 677 LLSRHRNKNTMNGAP 691
L R +N GAP
Sbjct: 1035 -LGIFRRRNESPGAP 1048
>gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo
sapiens]
Length = 519
Score = 34.7 bits (78), Expect = 0.31
Identities = 73/315 (23%), Positives = 110/315 (34%), Gaps = 39/315 (12%)
Query: 397 PPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRAS-PLSSDSPVKTPIKVKVIEKD 455
PP P A KD V PC A P D+ PL P+ T + I++
Sbjct: 74 PPGPDAPPSKD--VPPCQE---PPPAQDLSPCQDLPAGQEPLPHQDPLLTK-DLPAIQES 127
Query: 456 ISVQAIACRSAPVSK-----------TLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKL 504
+ C+ P S+ T+SS D LL G P A R +++L
Sbjct: 128 PTRDLPPCQDLPPSQVSLPAKALTEDTMSSGD--LLAATGDPPAAP---RPAFVIPEVRL 182
Query: 505 KSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAA--SAPPEE 562
S + G S + + +G D ++ ER+ A S+ E
Sbjct: 183 DSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIET 242
Query: 563 AESAQASLAPKPQED----ELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGT 618
+ A+ L+ + Q L +EP+ ++S L E + S+ + P T
Sbjct: 243 GQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPST 302
Query: 619 AKKHKG--GILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKK 676
KK G G LFF + S D V + +RK L + + K
Sbjct: 303 LKKELGRNGGSMHHLSLFFTGHRK-------MSGADTVGDDDEASRKRKSKNLAKDMKNK 355
Query: 677 LLSRHRNKNTMNGAP 691
L R +N GAP
Sbjct: 356 -LGIFRRRNESPGAP 369
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 34.7 bits (78), Expect = 0.31
Identities = 73/315 (23%), Positives = 110/315 (34%), Gaps = 39/315 (12%)
Query: 397 PPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRAS-PLSSDSPVKTPIKVKVIEKD 455
PP P A KD V PC A P D+ PL P+ T + I++
Sbjct: 472 PPGPDAPPSKD--VPPCQE---PPPAQDLSPCQDLPAGQEPLPHQDPLLTK-DLPAIQES 525
Query: 456 ISVQAIACRSAPVSK-----------TLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKL 504
+ C+ P S+ T+SS D LL G P A R +++L
Sbjct: 526 PTRDLPPCQDLPPSQVSLPAKALTEDTMSSGD--LLAATGDPPAAP---RPAFVIPEVRL 580
Query: 505 KSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAA--SAPPEE 562
S + G S + + +G D ++ ER+ A S+ E
Sbjct: 581 DSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEAKRSSMIET 640
Query: 563 AESAQASLAPKPQED----ELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGT 618
+ A+ L+ + Q L +EP+ ++S L E + S+ + P T
Sbjct: 641 GQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSPST 700
Query: 619 AKKHKG--GILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKK 676
KK G G LFF + S D V + +RK L + + K
Sbjct: 701 LKKELGRNGGSMHHLSLFFTGHRK-------MSGADTVGDDDEASRKRKSKNLAKDMKNK 753
Query: 677 LLSRHRNKNTMNGAP 691
L R +N GAP
Sbjct: 754 -LGIFRRRNESPGAP 767
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 34.7 bits (78), Expect = 0.31
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 19/189 (10%)
Query: 466 APVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQ 525
APV K S D+ P +E + +L S P ++S + SG++ T
Sbjct: 984 APVDKVELSEDS---------PNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGD 1034
Query: 526 DHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLE 585
+ TA S EDA P+ A P EE SA +P P + E
Sbjct: 1035 VVYTGRKENITAKASS---EDAGPSPQTRATKYPAEEPASAWTP-SPPPVTTSSSKDEEE 1090
Query: 586 KEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTAKKHKGGILRKG--AKLFFRRRHQQKD 643
+E + +++ + G + + + P +AK G + + G +KL R+++Q +
Sbjct: 1091 EEEE----GDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQAN 1146
Query: 644 PGMSQSHND 652
+S D
Sbjct: 1147 GSAKKSGGD 1155
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 34.7 bits (78), Expect = 0.31
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 19/189 (10%)
Query: 466 APVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQ 525
APV K S D+ P +E + +L S P ++S + SG++ T
Sbjct: 939 APVDKVELSEDS---------PNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGD 989
Query: 526 DHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLE 585
+ TA S EDA P+ A P EE SA +P P + E
Sbjct: 990 VVYTGRKENITAKASS---EDAGPSPQTRATKYPAEEPASAWTP-SPPPVTTSSSKDEEE 1045
Query: 586 KEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTAKKHKGGILRKG--AKLFFRRRHQQKD 643
+E + +++ + G + + + P +AK G + + G +KL R+++Q +
Sbjct: 1046 EEEE----GDKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQYRQAN 1101
Query: 644 PGMSQSHND 652
+S D
Sbjct: 1102 GSAKKSGGD 1110
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 34.3 bits (77), Expect = 0.40
Identities = 39/208 (18%), Positives = 80/208 (38%), Gaps = 11/208 (5%)
Query: 394 PIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIE 453
P P+P+ + K+ VT V V+ P+V+ + D P+KT K V E
Sbjct: 547 PAAKPLPSKSVRKESKEET--PEVTKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTE 604
Query: 454 KDISVQAIACRSAPVSKTLSSSD-TELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKST 512
K++ + +PV ++ T++ + + + E K + + P+K+
Sbjct: 605 KEVPSKE---EPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKE-- 659
Query: 513 IIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAP 572
+ KT + ++ + +E+ + PP+E +
Sbjct: 660 -VAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEK 718
Query: 573 K--PQEDELDSWDLEKEPQAAAWSSQVL 598
K +E++ +++K P+ A SS L
Sbjct: 719 KEVKKEEKEPKKEIKKLPKDAKKSSTPL 746
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 33.9 bits (76), Expect = 0.52
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 507 PRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESA 566
P+++ ++++ I K S + A +QG SV S HQ A S A PP E +
Sbjct: 181 PQEEQELVVT-IPKNSHKKGAKLAALQG---SVTSAHQVPAVSSVSHTALYTPPPEIPTT 236
Query: 567 -----QASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDG-----DELSESSMSVLEP 616
S+ P L S AA +Q L G D + + ++L P
Sbjct: 237 VLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVKRKADTTTPTPTAILAP 296
Query: 617 GTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKG 666
G+ G + K A+L RR + + DL +Q S +KG
Sbjct: 297 GSPASPPGSLEPKAARLPPMRRESGRP--IKPPRKDLPDSQQQHQSSKKG 344
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 33.9 bits (76), Expect = 0.52
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 507 PRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESA 566
P+++ ++++ I K S + A +QG SV S HQ A S A PP E +
Sbjct: 181 PQEEQELVVT-IPKNSHKKGAKLAALQG---SVTSAHQVPAVSSVSHTALYTPPPEIPTT 236
Query: 567 -----QASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDG-----DELSESSMSVLEP 616
S+ P L S AA +Q L G D + + ++L P
Sbjct: 237 VLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVKRKADTTTPTPTAILAP 296
Query: 617 GTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKG 666
G+ G + K A+L RR + + DL +Q S +KG
Sbjct: 297 GSPASPPGSLEPKAARLPPMRRESGRP--IKPPRKDLPDSQQQHQSSKKG 344
>gi|118572603 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 33.5 bits (75), Expect = 0.68
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Query: 554 AAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWS-SQVLLDPDGDELSESSMS 612
A++ P +A A+ P ED LD DL + P ++ + S+ L + S +
Sbjct: 636 ASSRELPSQASGGLANPPPVNLEDSLDE-DLIRNPASSVEAVSKELAALNSRAAGNSEFT 694
Query: 613 VLEPGTAKKHK-GGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFL-------------EQ 658
+ P A K GG+L K F + P S + L FL ++
Sbjct: 695 LPAPSKAPAEKVGGVLCTEEKRNFAKPSPSAPPPASSLQSPLNFLAEQALALGQSSQEKK 754
Query: 659 PEGSRRKGITLTRILNKKLLSRHRNKNTMNGAP 691
PE S K ++ LNK L H++K + P
Sbjct: 755 PESSGYKELSCQAPLNKGLPEVHQSKAKHHSLP 787
>gi|118572601 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 33.5 bits (75), Expect = 0.68
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Query: 554 AAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWS-SQVLLDPDGDELSESSMS 612
A++ P +A A+ P ED LD DL + P ++ + S+ L + S +
Sbjct: 636 ASSRELPSQASGGLANPPPVNLEDSLDE-DLIRNPASSVEAVSKELAALNSRAAGNSEFT 694
Query: 613 VLEPGTAKKHK-GGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFL-------------EQ 658
+ P A K GG+L K F + P S + L FL ++
Sbjct: 695 LPAPSKAPAEKVGGVLCTEEKRNFAKPSPSAPPPASSLQSPLNFLAEQALALGQSSQEKK 754
Query: 659 PEGSRRKGITLTRILNKKLLSRHRNKNTMNGAP 691
PE S K ++ LNK L H++K + P
Sbjct: 755 PESSGYKELSCQAPLNKGLPEVHQSKAKHHSLP 787
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 33.5 bits (75), Expect = 0.68
Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 34/198 (17%)
Query: 397 PPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDI 456
PP A + R +P G K + +S SSD + K + ++K +
Sbjct: 100 PPAKKAAVPAKRVGLPPG---------KAAAKASESSSSEESSDDDDEEDQKKQPVQKGV 150
Query: 457 SVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTI--- 513
QA A ++ P K SSD++ + +P + + K + K+P K +
Sbjct: 151 KPQAKAAKAPP--KKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPK 208
Query: 514 IISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERA-------------AASAPP 560
I +G + +S S ++S D + +E A + P++ AA+ P
Sbjct: 209 IANGKAASSSSSSSS-------SSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPT 261
Query: 561 EEAESAQASLAPKPQEDE 578
++ S++ S + + +E +
Sbjct: 262 RKSSSSEDSSSDEEEEQK 279
Score = 30.4 bits (67), Expect = 5.8
Identities = 56/221 (25%), Positives = 81/221 (36%), Gaps = 28/221 (12%)
Query: 433 RASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVA 492
+ P SS P P K + +A+ + PV + SSD SD +E
Sbjct: 285 KPGPYSSVPPPSAPPPKKSLGTQPPKKAVE-KQQPVESSEDSSDE-------SDSSSEEE 336
Query: 493 IRQLSES--SKLKLKSP-RKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPS 549
+ +++ SK K P KK+ S S + S+D +A T S
Sbjct: 337 KKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTK 396
Query: 550 HPERAAASAPPEEAESAQASLAPK----PQEDELDSWDLEK--------EPQA---AAWS 594
P A+AP + Q L K E+E S + EK +P+A AA S
Sbjct: 397 SPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALS 456
Query: 595 SQVLLDPDG--DELSESSMSVLEPGTAKKHKGGILRKGAKL 633
P G D S+S S E K K + +K K+
Sbjct: 457 LPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKV 497
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 33.5 bits (75), Expect = 0.68
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 29/212 (13%)
Query: 397 PPVPAAKIEKDRTVMPCGTV---VTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIE 453
PPV + EK V P G TA KT+ + V + PV K + IE
Sbjct: 1926 PPVSPGRTEKRLPVSPSGRTDKHQPVSTAGKTEKHLPVSPSGKTEKQPPVSPTSKTERIE 1985
Query: 454 KDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTI 513
+ +SV+ + ++ + S T L + +Q K K++ ++K I
Sbjct: 1986 ETMSVREL-MKAFQSGQDPSKHKTGLF--------EHKSAKQKQPQEKGKVRVEKEKGPI 2036
Query: 514 IISGISKTSLSQ----------DHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPE-- 561
+ ++ + +Q A +G S +EDA E+ + PE
Sbjct: 2037 LTQREAQKTENQTIKRGQRLPVTGTAESKRGVRVSSIGVKKEDAAGGKEKVLSHKIPEPV 2096
Query: 562 ----EAESAQASLAPKPQ-EDELDSWDLEKEP 588
E ES + S PK + DE DL+ P
Sbjct: 2097 QSVPEEESHRESEVPKEKMADEQGDMDLQISP 2128
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 33.5 bits (75), Expect = 0.68
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 377 SVTAEFSYMEPGELKSWPIPPPVPAAK-IEKDRTVMPCGTVVTTVTAVKTKPRVDVGRAS 435
+ TA F + GE + P PPP+P A+ + K++ P G +++ R G S
Sbjct: 415 TATAAFGARDSGEFRRAPAPPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFG-WS 473
Query: 436 PLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQ 495
P DSP ++ + ++ R + L T+LL L D E+ +
Sbjct: 474 PEPCDSPGTPTLESSPAGPEKPHDSLDSR---IEMLLKEQRTKLLFLREPDSDTELQMEG 530
Query: 496 LSESSKLKLKSP 507
SS SP
Sbjct: 531 SPISSSSSQLSP 542
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 33.5 bits (75), Expect = 0.68
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 23/175 (13%)
Query: 425 TKPRVDVGRA---SPLSSDSP-------VKTPIKVKVIEKDIS--VQAIACRSAPVSKTL 472
T+P D A SPLS ++ V++P+ + ++ S +Q +A AP +T
Sbjct: 480 TEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETP 539
Query: 473 SSSDTELLVLNGSDPV-AEVAIRQLS----ESSKLKLKSPRKKSTIIISGISKTSLSQDH 527
+ + + L ++ AEV E + L+L+ P + T + L
Sbjct: 540 AEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAAT 599
Query: 528 DAALMQGYTASVDSTHQEDAPSH-----PERAAASAPPEEAESAQASLAPKPQED 577
+A+ + A V E+AP+ E A A P AE A A + P P E+
Sbjct: 600 EASAEEA-PAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE 653
Score = 30.4 bits (67), Expect = 5.8
Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 37/269 (13%)
Query: 387 PGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTP 446
P ++ IPP +P+ +++ DR+ T T+ + +VD + + S V
Sbjct: 109 PESVQDVEIPPNIPSVQLKMDRSQQTSRTGYWTMMNIPPVEKVDKEQQTYFSESEIV--- 165
Query: 447 IKVKVIEKDISVQAIACRSAPVSKTLSSSDTELL-VLNGSDPVAEVAIRQLSESSKLKLK 505
+ + + A + K +S E N ++ + + I + S + + K
Sbjct: 166 VISRPDSSSTKSKEDALKHKSSGKIFASEHPEFQPATNSNEEIGQKNISRTSFTQETKKG 225
Query: 506 SP-------RKKSTIII----SGISKTSLSQDHDAA-----------LMQGYTAS----- 538
P R++ T+ + S + K + ++ + L++ TA
Sbjct: 226 PPVLLEDELREEVTVPVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRP 285
Query: 539 VDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQV- 597
+ TH + PS E A A AE++ P +E L + E +P +A S V
Sbjct: 286 AEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVE 345
Query: 598 ----LLDPDGDEL-SESSMSVLEPGTAKK 621
+L P +E SE + + P A+K
Sbjct: 346 LLAEILPPSAEESPSEEPPAEILPPPAEK 374
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 33.1 bits (74), Expect = 0.89
Identities = 81/384 (21%), Positives = 115/384 (29%), Gaps = 62/384 (16%)
Query: 331 ISEAGRSSEGLLATATVP-----LDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYM 385
IS + L + T P F P P + TL+ S S V T S+
Sbjct: 864 ISSGSMETTALPGSTTTPGLSERSTTFHSSPRSPAT-TLSPASTTSSGVSEESTT--SHS 920
Query: 386 EPGELKSWPIPPPVPAAKIEKDRTVM---PCGTVVTTVTAVKTKPRVDVGRASPLSSDSP 442
PG + P + + T P T T + A T V SP+SS S
Sbjct: 921 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTXLVGEPTTSPISSGST 980
Query: 443 VKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKL 502
T + +S ++ S+P S DT L A +SE S
Sbjct: 981 ETTALPGSTTTAGLSEKSTTFYSSP-----RSPDTTL-------SPASTTSSGVSEESTT 1028
Query: 503 KLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEE 562
P T G + ++ QE SH +
Sbjct: 1029 SHSRPGSTHTTAFPG------------------STTMPGVSQESTASHSSPGSTDTTLSP 1070
Query: 563 AESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDGDELS---ESS----MSVLE 615
+ +SL P +S P S++ L PD S E+S S
Sbjct: 1071 RSTTASSLGP-------ESTTFHSGP----GSTETTLLPDNTTASGLLEASTPVHSSTGS 1119
Query: 616 PGTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLE---QPEGSRRKGITLTRI 672
P T G R+G F+ KD + F+E GS T
Sbjct: 1120 PRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHGSPSSIPTTHFS 1179
Query: 673 LNKKLLSRHRNKNTMNGAPVEPCT 696
+ R T++ +PV P T
Sbjct: 1180 ASSTTFGRSEESTTVHSSPVAPAT 1203
>gi|20270323 zinc finger protein 653 [Homo sapiens]
Length = 615
Score = 33.1 bits (74), Expect = 0.89
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Query: 516 SGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQ 575
SG+ + L ++ A+M+G A + + PS + A + + E L K +
Sbjct: 343 SGVPGSGLGEEVPCAMMEGVAAYTQTEPEGSQPSTMDATAVAGIETKKEKEDLCLLKKEE 402
Query: 576 EDELDSWDL------EKEPQAAAWSSQVLLDPDGDELSESSMSVL 614
++E + +L EP+A A DG+EL S MS +
Sbjct: 403 KEEPVAPELATTVPESAEPEAEA---------DGEELDGSDMSAI 438
>gi|191252814 RIMS binding protein 3B [Homo sapiens]
Length = 1639
Score = 32.7 bits (73), Expect = 1.2
Identities = 37/142 (26%), Positives = 54/142 (38%), Gaps = 6/142 (4%)
Query: 262 ELKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFSST---LTKNTPDLMWEEEFTF 318
E +L ++ I P SG + V L +P+ + SS K L + +
Sbjct: 195 ERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSA 254
Query: 319 ELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSV 378
E+ +S+ L L S S +GLL+T LD F S T + A S S
Sbjct: 255 EVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSS 314
Query: 379 TAEFSYMEPGELKSWPIPPPVP 400
PG + P P P+P
Sbjct: 315 P---DTSTPGSRRLSPPPSPLP 333
>gi|191252806 RIMS binding protein 3C [Homo sapiens]
Length = 1639
Score = 32.7 bits (73), Expect = 1.2
Identities = 37/142 (26%), Positives = 54/142 (38%), Gaps = 6/142 (4%)
Query: 262 ELKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFSST---LTKNTPDLMWEEEFTF 318
E +L ++ I P SG + V L +P+ + SS K L + +
Sbjct: 195 ERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSA 254
Query: 319 ELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSV 378
E+ +S+ L L S S +GLL+T LD F S T + A S S
Sbjct: 255 EVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSS 314
Query: 379 TAEFSYMEPGELKSWPIPPPVP 400
PG + P P P+P
Sbjct: 315 P---DTSTPGSRRLSPPPSPLP 333
>gi|149944516 tet oncogene family member 3 [Homo sapiens]
Length = 1660
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 392 SWPIPPPVPAAKIEKDRTVMPCGTVVTTV----TAVKTKPRVDVGRASPLSSDSPVKTPI 447
SWP+P P P E ++ + + +V A+ TKP+V V +P SS +P +P+
Sbjct: 314 SWPMPRPSPDPMAELEQLLGSASDYIQSVFKRPEALPTKPKVKV--EAPSSSPAPAPSPV 371
>gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
Length = 1359
Score = 32.7 bits (73), Expect = 1.2
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 544 QEDAPSHPERAAASAPPEEAESAQASLAPKPQED---ELDSWDLEKEPQAAAW--SSQVL 598
+E++ S +++S+ EAE Q + A QED +S ++ EPQ W S V
Sbjct: 845 EEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPESPVC 904
Query: 599 LDPDGDELSESSMSVLEPG 617
G+ SES L+PG
Sbjct: 905 RSGRGESKSESWSEELQPG 923
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,970,703
Number of Sequences: 37866
Number of extensions: 1392660
Number of successful extensions: 5068
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 4906
Number of HSP's gapped (non-prelim): 258
length of query: 696
length of database: 18,247,518
effective HSP length: 109
effective length of query: 587
effective length of database: 14,120,124
effective search space: 8288512788
effective search space used: 8288512788
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.