Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239754289
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754289 PREDICTED: hypothetical protein [Homo sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754289 PREDICTED: hypothetical protein [Homo sapiens] 369 e-103
gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo ... 369 e-103
gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo ... 369 e-103
gi|239740873 PREDICTED: hypothetical protein XP_002344073 [Homo ... 369 e-103
gi|239740807 PREDICTED: hypothetical protein [Homo sapiens] 369 e-103
gi|239513965 PREDICTED: hypothetical protein [Homo sapiens] 369 e-103
gi|239740757 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|239740703 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|239755954 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239750480 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 39 0.002
gi|33286436 gametogenetin [Homo sapiens] 39 0.002
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 39 0.003
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 36 0.015
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 36 0.015
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 36 0.020
gi|19111150 angiomotin isoform 2 [Homo sapiens] 35 0.026
gi|166064029 angiomotin isoform 1 [Homo sapiens] 35 0.026
gi|38683851 round spermatid basic protein 1 [Homo sapiens] 35 0.026
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 35 0.034
gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo ... 35 0.034
gi|50345881 cytoplasmic polyadenylation element binding protein ... 35 0.044
gi|27597078 TYRO3 protein tyrosine kinase [Homo sapiens] 35 0.044
gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo sap... 34 0.058
gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo sap... 34 0.058
gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo sap... 34 0.058
gi|239745488 PREDICTED: hypothetical protein XP_002343476 isofor... 34 0.058
gi|239745486 PREDICTED: hypothetical protein XP_002343475 isofor... 34 0.058
gi|239745484 PREDICTED: hypothetical protein XP_002343474 isofor... 34 0.058
>gi|239754289 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 369 bits (947), Expect = e-103
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
>gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo
sapiens]
Length = 178
Score = 369 bits (947), Expect = e-103
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
>gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo
sapiens]
Length = 178
Score = 369 bits (947), Expect = e-103
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
>gi|239740873 PREDICTED: hypothetical protein XP_002344073 [Homo
sapiens]
Length = 178
Score = 369 bits (947), Expect = e-103
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
>gi|239740807 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 369 bits (947), Expect = e-103
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
>gi|239513965 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 369 bits (947), Expect = e-103
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVPRSRGKRLQKICRFSLLVLRTHLGPDSVASPYVGARVD 178
>gi|239740757 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 296 bits (759), Expect = 5e-81
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVP 141
RRGWDGTWTPRFSRPRDGLVP
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVP 141
Score = 27.3 bits (59), Expect = 7.1
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 167 SVASPYVGARVD 178
SVASPYVGARVD
Sbjct: 297 SVASPYVGARVD 308
>gi|239740703 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 296 bits (759), Expect = 5e-81
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP
Sbjct: 1 MPVTCGVRCSSYRLSSHVLLAFWAFAGVVMVTGRRPPTRAPQPRRRRRRLGLQPFALPPP 60
Query: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS
Sbjct: 61 PRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHS 120
Query: 121 RRGWDGTWTPRFSRPRDGLVP 141
RRGWDGTWTPRFSRPRDGLVP
Sbjct: 121 RRGWDGTWTPRFSRPRDGLVP 141
Score = 27.3 bits (59), Expect = 7.1
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 167 SVASPYVGARVD 178
SVASPYVGARVD
Sbjct: 297 SVASPYVGARVD 308
>gi|239755954 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 43.5 bits (101), Expect = 1e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
R P PR R R + P + P S A +RS A T P
Sbjct: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
Query: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
Query: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
+ RF+ L V+ HLG A P+ G
Sbjct: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
>gi|239750480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 43.5 bits (101), Expect = 1e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
R P PR R R + P + P S A +RS A T P
Sbjct: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
Query: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
Query: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
+ RF+ L V+ HLG A P+ G
Sbjct: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 60 PPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAPPAGG 114
PP + +GPG+ SA AA T AP AAA A A +A PAPP G
Sbjct: 13 PPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAA-AAAAPGPTPPAPPGPG 66
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 38.9 bits (89), Expect = 0.002
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 14/112 (12%)
Query: 36 PPTRAPQPRRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMA--R 93
PP P P + LQP LP P L+ G G + + A TAAPA A+A +
Sbjct: 438 PPLPPPTPPPTLQPPALQPTPLPVAPPLTPGLGH-----KESALAPTAAPALPPALAADQ 492
Query: 94 ALGPYVTSACSSATPAP------PAGGDVTHHSRRGWDGTWTPRFSRPRDGL 139
A P A + A P+P PA + +RR G+ R + +DGL
Sbjct: 493 APAPSPAPAPTVAEPSPPVSAPAPAAAPIKTRTRRN-KGSRAARGATRKDGL 543
Score = 29.6 bits (65), Expect = 1.4
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 21/114 (18%)
Query: 35 RPPTRAPQPRRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSAT-----------AAQTA 83
+P RAP RR ++P RL+ G G W F SAT A+ +
Sbjct: 18 QPSDRAPDSRRTSL---VEPEMTSQAMRLTRGLGVW--FPGSATPPGLMVPREPQASPST 72
Query: 84 APATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWD---GTWTPRFSR 134
P T + + P +A SA P PAG + S+ W GT PR R
Sbjct: 73 LPLTLERPSPVMPPPEEAAAVSAPPPAPAGTLLPGPSK--WQKPAGTPVPRIRR 124
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 38.5 bits (88), Expect = 0.003
Identities = 36/104 (34%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 36 PPTRAPQPRRRRRRLGLQPFALPPPPRLSL-----------GPGSWAKFARSATAA---- 80
PP A P R GLQ + PP S G G A A +A AA
Sbjct: 291 PPPPALPPMHRYDMAGLQYSPMMPPGAQSYMNVAAAAAAASGYGGMAPSATAAAAAAYGQ 350
Query: 81 --QTAAPATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRR 122
TAA A AAA A +LGP + S + PPA + HS+R
Sbjct: 351 QPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPA---IASHSQR 391
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 36.2 bits (82), Expect = 0.015
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 44 RRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVT--- 100
R R R L +QP + P P S RSA AA TAA A AA+ A A + T
Sbjct: 11 RSRSRSLDIQPSSEGLGPTSEPFPSS-DDSPRSALAAATAAAAAAASAAAATAAFTTAKA 69
Query: 101 SACSSATPAP 110
+A S+ TPAP
Sbjct: 70 AALSTKTPAP 79
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 36.2 bits (82), Expect = 0.015
Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 44 RRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVT--- 100
R R R L +QP + P P S RSA AA TAA A AA+ A A + T
Sbjct: 11 RSRSRSLDIQPSSEGLGPTSEPFPSS-DDSPRSALAAATAAAAAAASAAAATAAFTTAKA 69
Query: 101 SACSSATPAP 110
+A S+ TPAP
Sbjct: 70 AALSTKTPAP 79
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 35.8 bits (81), Expect = 0.020
Identities = 38/117 (32%), Positives = 45/117 (38%), Gaps = 34/117 (29%)
Query: 35 RPPTRA--------PQPRRRRRR--LGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAA 84
RPPTRA QP RRRRR L P P P S PG A+ AR+A +
Sbjct: 62 RPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGAR-ARAARVSPPTP 120
Query: 85 PATAAAMARALGPYVTSACSSATPAPPA-------------GGDVTHHSRRGWDGTW 128
P + + A S TPAP A GG ++ RR G W
Sbjct: 121 PRSG----------LDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEW 167
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 35.8 bits (81), Expect = 0.020
Identities = 38/117 (32%), Positives = 45/117 (38%), Gaps = 34/117 (29%)
Query: 35 RPPTRA--------PQPRRRRRR--LGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAA 84
RPPTRA QP RRRRR L P P P S PG A+ AR+A +
Sbjct: 62 RPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGAR-ARAARVSPPTP 120
Query: 85 PATAAAMARALGPYVTSACSSATPAPPA-------------GGDVTHHSRRGWDGTW 128
P + + A S TPAP A GG ++ RR G W
Sbjct: 121 PRSG----------LDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEW 167
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 35.4 bits (80), Expect = 0.026
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 54 PFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSA-TPAPPA 112
P A P P +L P A+++ AQT AP +A A+A P T A + A PA PA
Sbjct: 564 PAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPA 623
Query: 113 GGDVTH 118
G H
Sbjct: 624 TGPGPH 629
Score = 28.1 bits (61), Expect = 4.1
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 32 TGRRP-PTRAPQPRRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSAT----AAQTAAPA 86
TG R T+ + + + P ++P P + + A + T AA A A
Sbjct: 448 TGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVA 507
Query: 87 TAAAMARALGPY-VTSACSSATPAPPAGGDV 116
AAA A A P T+A ++A +P A G +
Sbjct: 508 AAAAPAAAAAPSPATAAATAAAVSPAAAGQI 538
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 35.4 bits (80), Expect = 0.026
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 54 PFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSA-TPAPPA 112
P A P P +L P A+++ AQT AP +A A+A P T A + A PA PA
Sbjct: 973 PAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPA 1032
Query: 113 GGDVTH 118
G H
Sbjct: 1033 TGPGPH 1038
Score = 28.1 bits (61), Expect = 4.1
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 32 TGRRP-PTRAPQPRRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSAT----AAQTAAPA 86
TG R T+ + + + P ++P P + + A + T AA A A
Sbjct: 857 TGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVA 916
Query: 87 TAAAMARALGPY-VTSACSSATPAPPAGGDV 116
AAA A A P T+A ++A +P A G +
Sbjct: 917 AAAAPAAAAAPSPATAAATAAAVSPAAAGQI 947
>gi|38683851 round spermatid basic protein 1 [Homo sapiens]
Length = 802
Score = 35.4 bits (80), Expect = 0.026
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 31/111 (27%)
Query: 34 RRPPTRAPQPRRRRRRLG---------------LQPFALPPPPRLSLGPGSWAKFARSAT 78
+ PP P RRR R+ ++P LPPPP SL P A A
Sbjct: 105 QEPPLAPPHRRRRSRQHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAP------AGPAV 158
Query: 79 AAQTAAPATAAAMARALGPYVTSACSSATPAPPAGGDV---THHSRRGWDG 126
AA AP+T+A P SA P G HH RG DG
Sbjct: 159 AAPLPAPSTSALF--TFSPLTVSAA-----GPKHKGHKERHKHHHHRGPDG 202
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 35.0 bits (79), Expect = 0.034
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 33 GRRPPTRA---PQPRRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAA 89
G R P A P P R LGL LPPPP + + S++ Q P
Sbjct: 932 GARSPQAAQPSPAPPGARGGLGLPEHFLPPPP---------SSRSPSSSPGQLGQPPGEL 982
Query: 90 AMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVP 141
++ A GP T P PP+ G G +P PR GL P
Sbjct: 983 SLGLATGPLSTPETPPRQPEPPS-------LVAGASGGASPVGFTPRGGLSP 1027
Score = 34.3 bits (77), Expect = 0.058
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 37 PTRAPQPRRRRRRLGLQPFALPPPPRL-------SLGPGSWAKFARSATAAQTAAPATAA 89
P+ P+ L L P + PPPP++ L PG + + +A+Q A P A
Sbjct: 1039 PSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGA 1098
Query: 90 AMARALGPYVTSACSSATPA-PPAGG 114
R P+ + +A P P AGG
Sbjct: 1099 QTLRRASPHSSGESMAAFPLFPRAGG 1124
>gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo
sapiens]
Length = 176
Score = 35.0 bits (79), Expect = 0.034
Identities = 36/113 (31%), Positives = 40/113 (35%), Gaps = 21/113 (18%)
Query: 35 RPPTRA--------PQPRRRRRR--LGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAA 84
RPPTRA QP RRRRR L P P P S PG SA +
Sbjct: 62 RPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGGPCQGSA----RFS 117
Query: 85 PATAAAMARALGPYVTSACSSATPAPPAGGDVTHH-------SRRGWDGTWTP 130
P AA + GP S + P G H + RG G TP
Sbjct: 118 PDPAAVRPQPRGPQPDSGSARQVPPDSRGAQALHRGAPLASPAPRGVRGVETP 170
>gi|50345881 cytoplasmic polyadenylation element binding protein 3
[Homo sapiens]
Length = 698
Score = 34.7 bits (78), Expect = 0.044
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 36 PPTRAPQPRRRRRRLGLQPFALPPPPRLSLGPGSWAKFA-RSATAA------QTAAPATA 88
PP APQP + + P A PP R S S A +A RSA AA T+ P+++
Sbjct: 168 PPAPAPQPAQPAQ----PPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSS 223
Query: 89 AAMARALGPYVTSACSSA 106
+A+A A S+ SS+
Sbjct: 224 SAVAAAAAAAAASSASSS 241
>gi|27597078 TYRO3 protein tyrosine kinase [Homo sapiens]
Length = 890
Score = 34.7 bits (78), Expect = 0.044
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Query: 44 RRRRRRLGLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSAC 103
RR R GL P LPPPPRL L A A P +AAA + +G V
Sbjct: 4 RRSMGRPGLPPLPLPPPPRLGL---------LLAALASLLLPESAAAGLKLMGAPVKLTV 54
Query: 104 SSATP 108
S P
Sbjct: 55 SQGQP 59
>gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.058
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 51 GLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAP 110
G PPPP S F+ + AA AA AT+ A+ A+ AP
Sbjct: 134 GTSSSGTPPPPAFS--------FSCLSLAAAAAAAATSGAL-------------DASSAP 172
Query: 111 PAGGDVTHHSRRGWDGTW 128
GG V GW G+W
Sbjct: 173 GCGGSVHEGGSGGWGGSW 190
>gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.058
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 51 GLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAP 110
G PPPP S F+ + AA AA AT+ A+ A+ AP
Sbjct: 134 GTSSSGTPPPPAFS--------FSCLSLAAAAAAAATSGAL-------------DASSAP 172
Query: 111 PAGGDVTHHSRRGWDGTW 128
GG V GW G+W
Sbjct: 173 GCGGSVHEGGSGGWGGSW 190
>gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.058
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 51 GLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAP 110
G PPPP S F+ + AA AA AT+ A+ A+ AP
Sbjct: 134 GTSSSGTPPPPAFS--------FSCLSLAAAAAAAATSGAL-------------DASSAP 172
Query: 111 PAGGDVTHHSRRGWDGTW 128
GG V GW G+W
Sbjct: 173 GCGGSVHEGGSGGWGGSW 190
>gi|239745488 PREDICTED: hypothetical protein XP_002343476 isoform 3
[Homo sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.058
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 51 GLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAP 110
G PPPP S F+ + AA AA AT+ A+ A+ AP
Sbjct: 134 GTSSSGTPPPPAFS--------FSCLSLAAAAAAAATSGAL-------------DASSAP 172
Query: 111 PAGGDVTHHSRRGWDGTW 128
GG V GW G+W
Sbjct: 173 GCGGSVHEGGSGGWGGSW 190
>gi|239745486 PREDICTED: hypothetical protein XP_002343475 isoform 2
[Homo sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.058
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 51 GLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAP 110
G PPPP S F+ + AA AA AT+ A+ A+ AP
Sbjct: 134 GTSSSGTPPPPAFS--------FSCLSLAAAAAAAATSGAL-------------DASSAP 172
Query: 111 PAGGDVTHHSRRGWDGTW 128
GG V GW G+W
Sbjct: 173 GCGGSVHEGGSGGWGGSW 190
>gi|239745484 PREDICTED: hypothetical protein XP_002343474 isoform 1
[Homo sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.058
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 51 GLQPFALPPPPRLSLGPGSWAKFARSATAAQTAAPATAAAMARALGPYVTSACSSATPAP 110
G PPPP S F+ + AA AA AT+ A+ A+ AP
Sbjct: 134 GTSSSGTPPPPAFS--------FSCLSLAAAAAAAATSGAL-------------DASSAP 172
Query: 111 PAGGDVTHHSRRGWDGTW 128
GG V GW G+W
Sbjct: 173 GCGGSVHEGGSGGWGGSW 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,861,228
Number of Sequences: 37866
Number of extensions: 483723
Number of successful extensions: 3500
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 3058
Number of HSP's gapped (non-prelim): 660
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.