Guide to the Human Genome
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Name: OSGIN1 Sequence: fasta or formatted (560aa) NCBI GI: 118572590
Description:

oxidative stress induced growth inhibitor 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {477aa} oxidative stress induced growth inhibitor 1 isoform 2
alt prot {477aa} oxidative stress induced growth inhibitor 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         47           2
 C cysteine            1.6          9           2
 D aspartate           5.4         30           2
 E glutamate           3.9         22           1
 F phenylalanine       3.4         19           1
 G glycine             8.9         50           2
 H histidine           3.2         18           2
 I isoleucine          3.2         18           2
 K lysine              3.4         19           2
 L leucine            10.7         60           2
 M methionine          2.1         12           2
 N asparagine          2.3         13           1
 P proline             9.5         53           3
 Q glutamine           5.4         30           2
 R arginine            5.7         32           2
 S serine              8.0         45           3
 T threonine           3.6         20           1
 V valine              7.1         40           2
 W tryptophan          1.4          8           1
 Y tyrosine            2.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxidative stress induced growth inhibitor 1 isoform... 
OSGIN1                0.839   oxidative stress induced growth inhibitor 1 isoform ...
OSGIN1                0.839   oxidative stress induced growth inhibitor 1 isoform ...
OSGIN2                0.392   oxidative stress induced growth inhibitor family me...
OSGIN2                0.392   oxidative stress induced growth inhibitor family memb...
LOC100129630          0.012   PREDICTED: hypothetical protein 
LOC100129630          0.012   PREDICTED: hypothetical protein 
LOC100129630          0.012   PREDICTED: hypothetical protein 
RNF111                0.011   ring finger protein 111 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.011   mitogen-activated protein kinase 7 isoform 2 
MARCH4                0.010   membrane-associated ring finger (C3HC4) 4 
PRR12                 0.010   proline rich 12 
IRX5                  0.009   iroquois homeobox protein 5 
GGN                   0.009   gametogenetin 
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
C2orf71               0.009   hypothetical protein LOC388939 
BAT3                  0.008   HLA-B associated transcript-3 isoform b 
BAT3                  0.008   HLA-B associated transcript-3 isoform b 
BAT3                  0.008   HLA-B associated transcript-3 isoform b 
BAT3                  0.008   HLA-B associated transcript-3 isoform a 
LOC100286968          0.008   PREDICTED: hypothetical protein XP_002343626 
PHC3                  0.008   polyhomeotic like 3 
WASF1                 0.007   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.007   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.007   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.007   Wiskott-Aldrich syndrome protein family member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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