Guide to the Human Genome
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Search of human proteins with 239749633

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749633 PREDICTED: hypothetical protein [Homo sapiens]
         (111 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755140 PREDICTED: hypothetical protein [Homo sapiens]           229   5e-61
gi|239749633 PREDICTED: hypothetical protein [Homo sapiens]           229   5e-61
gi|239743908 PREDICTED: hypothetical protein XP_002342989 [Homo ...   229   5e-61
gi|238550149 tRNA phosphotransferase 1 isoform 3 [Homo sapiens]        28   1.2  
gi|14210524 BCL2-related ovarian killer [Homo sapiens]                 28   1.6  
gi|7662072 zinc finger and BTB domain containing 39 [Homo sapiens]     27   2.7  
gi|46410929 solute carrier family 43, member 3 [Homo sapiens]          27   3.5  
gi|41056259 solute carrier family 43, member 3 [Homo sapiens]          27   3.5  
gi|18252047 solute carrier family 43, member 3 [Homo sapiens]          27   3.5  
gi|4503835 frizzled 9 [Homo sapiens]                                   27   4.6  
gi|59806357 submaxillary gland androgen regulated protein 3 homo...    27   4.6  
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    27   4.6  
gi|10334859 creatine kinase, mitochondrial 1B precursor [Homo sa...    27   4.6  
gi|66346730 creatine kinase, mitochondrial 1A precursor [Homo sa...    27   4.6  
gi|14165278 hypothetical protein LOC84418 [Homo sapiens]               27   4.6  
gi|238550169 tRNA phosphotransferase 1 isoform 5 [Homo sapiens]        26   6.0  
gi|238550165 tRNA phosphotransferase 1 isoform 4 [Homo sapiens]        26   6.0  
gi|13899325 tRNA phosphotransferase 1 isoform 2 [Homo sapiens]         26   6.0  
gi|238550157 tRNA phosphotransferase 1 isoform 1 [Homo sapiens]        26   6.0  
gi|238550153 tRNA phosphotransferase 1 isoform 1 [Homo sapiens]        26   6.0  
gi|112382285 exostoses-like 1 [Homo sapiens]                           26   6.0  
gi|157909822 pragmin [Homo sapiens]                                    26   6.0  
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]         26   6.0  
gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]         26   6.0  
gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]         26   6.0  
gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]         26   6.0  
gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]         26   6.0  
gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]         26   6.0  
gi|4557265 beta-1-adrenergic receptor [Homo sapiens]                   26   7.8  
gi|239756555 PREDICTED: hypothetical protein XP_002344930 [Homo ...    26   7.8  

>gi|239755140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 111

 Score =  229 bits (583), Expect = 5e-61
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH 60
           MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH
Sbjct: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH 60

Query: 61  SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE 111
           SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE
Sbjct: 61  SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE 111


>gi|239749633 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 111

 Score =  229 bits (583), Expect = 5e-61
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH 60
           MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH
Sbjct: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH 60

Query: 61  SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE 111
           SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE
Sbjct: 61  SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE 111


>gi|239743908 PREDICTED: hypothetical protein XP_002342989 [Homo
           sapiens]
          Length = 111

 Score =  229 bits (583), Expect = 5e-61
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH 60
           MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH
Sbjct: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGH 60

Query: 61  SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE 111
           SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE
Sbjct: 61  SSLLWAPMPAEPPERLLPLAGGSFFWPHPPNHGYGLLPGALVLLALLSKEE 111


>gi|238550149 tRNA phosphotransferase 1 isoform 3 [Homo sapiens]
          Length = 255

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 19  FYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLE----------GRSIGHSSLLWAP- 67
           F PL  LL+L Q    S    ++  D+  + +  L+            + GHS  +  P 
Sbjct: 55  FVPLGTLLQLPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHSLQVGVPK 114

Query: 68  ---MPAEPPERLLPLAGGSFFWPHPPN 91
              MP E P+ L P+     FW H P+
Sbjct: 115 LELMPLETPQALPPMLVHGTFWKHWPS 141


>gi|14210524 BCL2-related ovarian killer [Homo sapiens]
          Length = 212

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 40 RKSSDSKTQSQAHLEGRSIGHSSLLWAPMPAEPPERLLPLAG 81
          R  +D +  +QA   GR   H+ LL A +    PER  P+ G
Sbjct: 20 RSPTDKELVAQAKALGREYVHARLLRAGLSWSAPERAAPVPG 61


>gi|7662072 zinc finger and BTB domain containing 39 [Homo sapiens]
          Length = 712

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 27  RLGQTIFLSVCHARKSSDSKTQSQAHLEGRSIGHSSLLWAPMPAEPPERLLPLAGG 82
           RLG    L  CH+       T     L   S  HS  L  P  AEP   L  L GG
Sbjct: 108 RLGMEDLLQACHSTFPDLESTARAKPLTSTSESHSGTLSCP-SAEPAHPLGELRGG 162


>gi|46410929 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 82  GSFFWPHPPNHGYGLLPG 99
           G   +P PPN+ YGL PG
Sbjct: 211 GHIPYPLPPNYSYGLCPG 228


>gi|41056259 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 82  GSFFWPHPPNHGYGLLPG 99
           G   +P PPN+ YGL PG
Sbjct: 211 GHIPYPLPPNYSYGLCPG 228


>gi|18252047 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 82  GSFFWPHPPNHGYGLLPG 99
           G   +P PPN+ YGL PG
Sbjct: 211 GHIPYPLPPNYSYGLCPG 228


>gi|4503835 frizzled 9 [Homo sapiens]
          Length = 591

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/29 (48%), Positives = 15/29 (51%)

Query: 66  APMPAEPPERLLPLAGGSFFWPHPPNHGY 94
           AP PA PP  L P AGGS    +P    Y
Sbjct: 176 APRPARPPGDLGPGAGGSGTCENPEKFQY 204


>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
           A precursor [Homo sapiens]
          Length = 134

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 70  AEPPERLLPLAGGSFFWPHPPNHGYGLLPGAL 101
           A PP    P   G    PHPP +G G  P  L
Sbjct: 36  APPPPPCFPFGTGFVPPPHPPPYGPGRFPPPL 67


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 64  LWAPMPAEPPERLLPLAGGSFFWPHPPNH 92
           L +  P  PP    P   G F WP PP H
Sbjct: 440 LLSERPPRPPPPPPPPRDGPFPWPWPPAH 468


>gi|10334859 creatine kinase, mitochondrial 1B precursor [Homo
           sapiens]
          Length = 417

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 8/45 (17%)

Query: 74  ERLLPLAGGSFFWPH--------PPNHGYGLLPGALVLLALLSKE 110
           ERL+   G  F W          P N G GL  G  + L LLSK+
Sbjct: 294 ERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKD 338


>gi|66346730 creatine kinase, mitochondrial 1A precursor [Homo
           sapiens]
          Length = 417

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 8/45 (17%)

Query: 74  ERLLPLAGGSFFWPH--------PPNHGYGLLPGALVLLALLSKE 110
           ERL+   G  F W          P N G GL  G  + L LLSK+
Sbjct: 294 ERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKD 338


>gi|14165278 hypothetical protein LOC84418 [Homo sapiens]
          Length = 97

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)

Query: 66 APMPAEPPERLLPLAGGSFFWPHPPNHGY 94
          AP P  PP+   P+  G    P+PP  GY
Sbjct: 16 APYPPYPPQ---PMGPGPMGGPYPPPQGY 41


>gi|238550169 tRNA phosphotransferase 1 isoform 5 [Homo sapiens]
          Length = 254

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 19  FYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLE----------GRSIGHSSLLWAP- 67
           F PL  LL+L Q    S    ++  D+  + +  L+            + GHS  L  P 
Sbjct: 55  FVPLGTLLQLPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHS--LQVPK 112

Query: 68  ---MPAEPPERLLPLAGGSFFWPHPPN 91
              MP E P+ L P+     FW H P+
Sbjct: 113 LELMPLETPQALPPMLVHGTFWKHWPS 139


>gi|238550165 tRNA phosphotransferase 1 isoform 4 [Homo sapiens]
          Length = 216

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 19  FYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLE----------GRSIGHSSLLWAP- 67
           F PL  LL+L Q    S    ++  D+  + +  L+            + GHS  L  P 
Sbjct: 55  FVPLGTLLQLPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHS--LQVPK 112

Query: 68  ---MPAEPPERLLPLAGGSFFWPHPPN 91
              MP E P+ L P+     FW H P+
Sbjct: 113 LELMPLETPQALPPMLVHGTFWKHWPS 139


>gi|13899325 tRNA phosphotransferase 1 isoform 2 [Homo sapiens]
          Length = 204

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 19 FYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLE----------GRSIGHSSLLWAP- 67
          F PL  LL+L Q    S    ++  D+  + +  L+            + GHS  L  P 
Sbjct: 6  FVPLGTLLQLPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHS--LQVPK 63

Query: 68 ---MPAEPPERLLPLAGGSFFWPHPPN 91
             MP E P+ L P+     FW H P+
Sbjct: 64 LELMPLETPQALPPMLVHGTFWKHWPS 90


>gi|238550157 tRNA phosphotransferase 1 isoform 1 [Homo sapiens]
          Length = 253

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 19  FYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLE----------GRSIGHSSLLWAP- 67
           F PL  LL+L Q    S    ++  D+  + +  L+            + GHS  L  P 
Sbjct: 55  FVPLGTLLQLPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHS--LQVPK 112

Query: 68  ---MPAEPPERLLPLAGGSFFWPHPPN 91
              MP E P+ L P+     FW H P+
Sbjct: 113 LELMPLETPQALPPMLVHGTFWKHWPS 139


>gi|238550153 tRNA phosphotransferase 1 isoform 1 [Homo sapiens]
          Length = 253

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 19  FYPLDQLLRLGQTIFLSVCHARKSSDSKTQSQAHLE----------GRSIGHSSLLWAP- 67
           F PL  LL+L Q    S    ++  D+  + +  L+            + GHS  L  P 
Sbjct: 55  FVPLGTLLQLPQFRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHS--LQVPK 112

Query: 68  ---MPAEPPERLLPLAGGSFFWPHPPN 91
              MP E P+ L P+     FW H P+
Sbjct: 113 LELMPLETPQALPPMLVHGTFWKHWPS 139


>gi|112382285 exostoses-like 1 [Homo sapiens]
          Length = 676

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 48  QSQAHLEGRSIGHSSLLWAPMPAEPPERLLPLAGGS 83
           Q  +  EGR    S+L+W   P +PP +L+    GS
Sbjct: 410 QQGSRPEGR---FSALIWVGPPGQPPLKLIQAVAGS 442


>gi|157909822 pragmin [Homo sapiens]
          Length = 1402

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 29  GQTIFLSVCHARKSSDSKTQSQAHLEGRSIGHSSLLWAPM-PAEPPERLLPLA------- 80
           GQ +     HA  +S+SK + +  +  + +  SS + +P+ P+     + PLA       
Sbjct: 518 GQGLSSRESHAHSASESKPKERPAIPPK-LSKSSPVGSPVSPSAGGPPVSPLADLSDGSS 576

Query: 81  GGSFFWPHPPNHG 93
           GGS   P PP+ G
Sbjct: 577 GGSSIGPQPPSQG 589


>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
          Length = 172

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVC 37
           MSS  S++   G S L PF P D    LG  +F  +C
Sbjct: 72  MSSSDSDSDWDGGSRLSPFLPHD---HLGLAVFSMLC 105


>gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
          Length = 139

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVC 37
           MSS  S++   G S L PF P D    LG  +F  +C
Sbjct: 72  MSSSDSDSDWDGGSRLSPFLPHD---HLGLAVFSMLC 105


>gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
          Length = 127

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVC 37
           MSS  S++   G S L PF P D    LG  +F  +C
Sbjct: 72  MSSSDSDSDWDGGSRLSPFLPHD---HLGLAVFSMLC 105


>gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
          Length = 133

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVC 37
           MSS  S++   G S L PF P D    LG  +F  +C
Sbjct: 72  MSSSDSDSDWDGGSRLSPFLPHD---HLGLAVFSMLC 105


>gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]
          Length = 133

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVC 37
           MSS  S++   G S L PF P D    LG  +F  +C
Sbjct: 72  MSSSDSDSDWDGGSRLSPFLPHD---HLGLAVFSMLC 105


>gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]
          Length = 123

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 1   MSSGSSEARIKGTSSLPPFYPLDQLLRLGQTIFLSVC 37
           MSS  S++   G S L PF P D    LG  +F  +C
Sbjct: 72  MSSSDSDSDWDGGSRLSPFLPHD---HLGLAVFSMLC 105


>gi|4557265 beta-1-adrenergic receptor [Homo sapiens]
          Length = 477

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 68  MPAEPPERLLPLAGGSFFWPHPPNH----GYGLLPGALVLL 104
           +PA PP  LLP A  S   P P +     G GLL   +VLL
Sbjct: 34  VPASPPASLLPPASES---PEPLSQQWTAGMGLLMALIVLL 71


>gi|239756555 PREDICTED: hypothetical protein XP_002344930 [Homo
           sapiens]
          Length = 345

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 39  ARKSSDSKTQSQAHLEGRSIGHSSLLWAPMPAEPPE-RLLPLAGGSFFWP 87
           AR+SS S+ +S      RSI  ++L+W    A     R + L  GSF  P
Sbjct: 79  ARRSSASRGRSPPRARKRSIPPAALMWRVRRARSARLRGVSLVAGSFSPP 128


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,181,759
Number of Sequences: 37866
Number of extensions: 237580
Number of successful extensions: 764
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 754
Number of HSP's gapped (non-prelim): 33
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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