Guide to the Human Genome
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Name: CKMT1A Sequence: fasta or formatted (417aa) NCBI GI: 66346730
Description:

creatine kinase, mitochondrial 1A precursor

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives
Proteins Measured in Common Diagnostic Tests
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         28           2
 C cysteine            1.7          7           1
 D aspartate           6.2         26           2
 E glutamate           7.0         29           2
 F phenylalanine       3.4         14           1
 G glycine             8.4         35           2
 H histidine           2.6         11           1
 I isoleucine          4.6         19           1
 K lysine              4.1         17           1
 L leucine            11.0         46           2
 M methionine          2.2          9           1
 N asparagine          3.1         13           2
 P proline             5.5         23           2
 Q glutamine           2.4         10           3
 R arginine           10.1         42           3
 S serine              5.3         22           2
 T threonine           5.5         23           2
 V valine              6.2         26           3
 W tryptophan          1.4          6           1
 Y tyrosine            2.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   creatine kinase, mitochondrial 1A precursor 
CKMT1B                1.000   creatine kinase, mitochondrial 1B precursor 
CKMT2                 0.801   sarcomeric mitochondrial creatine kinase precursor ...
CKMT2                 0.801   sarcomeric mitochondrial creatine kinase precursor ...
CKMT2                 0.801   sarcomeric mitochondrial creatine kinase precursor ...
CKB                   0.600   brain creatine kinase 
CKM                   0.583   muscle creatine kinase 
LOC100292542          0.248   PREDICTED: similar to creatine kinase, mitochondria...
ZRSR2                 0.006   U2 small nuclear RNA auxiliary factor 1-like 2 
NAT2                  0.005   N-acetyltransferase 2 
EPB41L4B              0.005   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.005   erythrocyte membrane protein band 4.1 like 4B isofo...
ESRP2                 0.005   RNA binding motif protein 35B 
EPN2                  0.005   epsin 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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