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Search of human proteins with 117553615
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117553615 slowmo homolog 2 [Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117553615 slowmo homolog 2 [Homo sapiens] 387 e-108
gi|215490114 slowmo homolog 1 isoform 1 [Homo sapiens] 256 1e-68
gi|38678528 slowmo homolog 1 isoform 1 [Homo sapiens] 256 1e-68
gi|239754923 PREDICTED: similar to slowmo homolog 1 [Homo sapiens] 104 4e-23
gi|239749466 PREDICTED: hypothetical protein XP_002347060 [Homo ... 104 4e-23
gi|239743604 PREDICTED: hypothetical protein XP_002342914 [Homo ... 104 4e-23
gi|7019509 PRELI domain containing 1 [Homo sapiens] 81 5e-16
gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens] 73 2e-13
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 69 3e-12
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 69 3e-12
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens] 69 3e-12
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 69 3e-12
gi|33667079 PRELI domain containing 2 isoform a [Homo sapiens] 67 1e-11
gi|150010661 SEC14-like 5 [Homo sapiens] 61 7e-10
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens] 56 2e-08
gi|83367077 mucin 16 [Homo sapiens] 33 0.12
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 33 0.20
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 33 0.20
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 33 0.20
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 33 0.20
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 33 0.20
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 33 0.20
gi|21264315 EH-domain containing 4 [Homo sapiens] 29 2.9
gi|4505781 phosphorylase kinase, alpha 2 (liver) [Homo sapiens] 28 3.7
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 28 4.9
gi|14149821 hypothetical protein LOC84103 [Homo sapiens] 28 4.9
>gi|117553615 slowmo homolog 2 [Homo sapiens]
Length = 194
Score = 387 bits (994), Expect = e-108
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWG 60
MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWG
Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWG 60
Query: 61 LPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPE 120
LPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPE
Sbjct: 61 LPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPE 120
Query: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELTASARG 180
KTVLTQEAIITVKGVSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELTASARG
Sbjct: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELTASARG 180
Query: 181 TIRTPMAAAAFAEK 194
TIRTPMAAAAFAEK
Sbjct: 181 TIRTPMAAAAFAEK 194
>gi|215490114 slowmo homolog 1 isoform 1 [Homo sapiens]
Length = 172
Score = 256 bits (653), Expect = 1e-68
Identities = 120/164 (73%), Positives = 144/164 (87%)
Query: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWG 60
MKIW+SEHVF HPW+TV AAM+KYPNPMNPSV+GVDVL R +D G+LHS RLLSTEWG
Sbjct: 1 MKIWSSEHVFGHPWDTVIQAAMRKYPNPMNPSVLGVDVLQRRVDGRGRLHSLRLLSTEWG 60
Query: 61 LPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPE 120
LPS+V++++G +RT TY++EHSVVDPVEK MEL STNI+ TN+VSV+ERL+Y PHP++PE
Sbjct: 61 LPSLVRAILGTSRTLTYIREHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPE 120
Query: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSNASKGREAMEWVI 164
TVLTQEAIITVKG+SL SYLE LMA+TISSNA KG A+EW+I
Sbjct: 121 MTVLTQEAIITVKGISLGSYLESLMANTISSNAKKGWAAIEWII 164
>gi|38678528 slowmo homolog 1 isoform 1 [Homo sapiens]
Length = 172
Score = 256 bits (653), Expect = 1e-68
Identities = 120/164 (73%), Positives = 144/164 (87%)
Query: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWG 60
MKIW+SEHVF HPW+TV AAM+KYPNPMNPSV+GVDVL R +D G+LHS RLLSTEWG
Sbjct: 1 MKIWSSEHVFGHPWDTVIQAAMRKYPNPMNPSVLGVDVLQRRVDGRGRLHSLRLLSTEWG 60
Query: 61 LPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPE 120
LPS+V++++G +RT TY++EHSVVDPVEK MEL STNI+ TN+VSV+ERL+Y PHP++PE
Sbjct: 61 LPSLVRAILGTSRTLTYIREHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPE 120
Query: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSNASKGREAMEWVI 164
TVLTQEAIITVKG+SL SYLE LMA+TISSNA KG A+EW+I
Sbjct: 121 MTVLTQEAIITVKGISLGSYLESLMANTISSNAKKGWAAIEWII 164
>gi|239754923 PREDICTED: similar to slowmo homolog 1 [Homo sapiens]
Length = 218
Score = 104 bits (260), Expect = 4e-23
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 21/152 (13%)
Query: 6 SEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIV 65
SE+VFD+P + AAM+KY N M ++V LH LS +WGL ++V
Sbjct: 82 SEYVFDYPCDIAIEAAMRKYLNLM--TIV--------------LHRQHFLSIKWGLLTLV 125
Query: 66 K----SLIGAARTKTYVQEHSVVDPVEKTMELKSTN-ISFTNMVSVDERLIYKPHPQDPE 120
K ++ +R TY++EH V+D V+K MEL TN I +N VSV+ +L+Y PH ++ E
Sbjct: 126 KVMRPQILETSRILTYIKEHFVIDLVKKKMELCCTNNIIVSNSVSVNGKLLYTPHLENLE 185
Query: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSN 152
T+LTQ AIIT G++L ++LE L A+ ISSN
Sbjct: 186 ITMLTQGAIITTSGITLGNHLESLTANIISSN 217
>gi|239749466 PREDICTED: hypothetical protein XP_002347060 [Homo
sapiens]
Length = 184
Score = 104 bits (260), Expect = 4e-23
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 21/152 (13%)
Query: 6 SEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIV 65
SE+VFD+P + AAM+KY N M ++V LH LS +WGL ++V
Sbjct: 48 SEYVFDYPCDIAIEAAMRKYLNLM--TIV--------------LHRQHFLSIKWGLLTLV 91
Query: 66 K----SLIGAARTKTYVQEHSVVDPVEKTMELKSTN-ISFTNMVSVDERLIYKPHPQDPE 120
K ++ +R TY++EH V+D V+K MEL TN I +N VSV+ +L+Y PH ++ E
Sbjct: 92 KVMRPQILETSRILTYIKEHFVIDLVKKKMELCCTNNIIVSNSVSVNGKLLYTPHLENLE 151
Query: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSN 152
T+LTQ AIIT G++L ++LE L A+ ISSN
Sbjct: 152 ITMLTQGAIITTSGITLGNHLESLTANIISSN 183
>gi|239743604 PREDICTED: hypothetical protein XP_002342914 [Homo
sapiens]
Length = 184
Score = 104 bits (260), Expect = 4e-23
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 21/152 (13%)
Query: 6 SEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIV 65
SE+VFD+P + AAM+KY N M ++V LH LS +WGL ++V
Sbjct: 48 SEYVFDYPCDIAIEAAMRKYLNLM--TIV--------------LHRQHFLSIKWGLLTLV 91
Query: 66 K----SLIGAARTKTYVQEHSVVDPVEKTMELKSTN-ISFTNMVSVDERLIYKPHPQDPE 120
K ++ +R TY++EH V+D V+K MEL TN I +N VSV+ +L+Y PH ++ E
Sbjct: 92 KVMRPQILETSRILTYIKEHFVIDLVKKKMELCCTNNIIVSNSVSVNGKLLYTPHLENLE 151
Query: 121 KTVLTQEAIITVKGVSLSSYLEGLMASTISSN 152
T+LTQ AIIT G++L ++LE L A+ ISSN
Sbjct: 152 ITMLTQGAIITTSGITLGNHLESLTANIISSN 183
>gi|7019509 PRELI domain containing 1 [Homo sapiens]
Length = 219
Score = 81.3 bits (199), Expect = 5e-16
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWG 60
+K + + V W+ V A Q+YPNP + V+ D++ R + P KL S RLL+
Sbjct: 2 VKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTNR 61
Query: 61 LPSIVKSLIGA-ARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDP 119
+P + L A YV E S+VDP +TM + NI+ ++ V+ER +Y + +
Sbjct: 62 MPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNS 121
Query: 120 EKTVLTQEAIITVKGVSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELT 175
T + +EA ++ +S ++ + SN +K + E+++ KL E T
Sbjct: 122 GWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAPSKT 177
>gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens]
Length = 177
Score = 72.8 bits (177), Expect = 2e-13
Identities = 41/158 (25%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 9 VFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPS-GKLHSHRLLSTEWGLPSIVKS 67
V+ +P+E V + ++KYPNPM+ +V+ V +++ D S G ++ R+ + +P I++
Sbjct: 10 VYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK 69
Query: 68 LIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQE 127
+ ++E S ++P E+ M ++S +++T S+ E +++ ++P T Q
Sbjct: 70 VSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQR 129
Query: 128 AIITVKGVS-LSSYLEGLMASTISSNASKGREAMEWVI 164
I++ GV L+ LE ++ + A KG ME ++
Sbjct: 130 GRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLL 167
>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 68.9 bits (167), Expect = 3e-12
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 9 VFDHPWETVTTAAMQKYPN-PMNPSVVGVDVLDRHIDPSGKLHS-HRLLSTEWGLPSIVK 66
V+ +P+E + A +++P P+ P VG D ++ G +H R + P ++K
Sbjct: 11 VYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLLK 70
Query: 67 SLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQ 126
+ G +VQ++S+ + E+T+ +++ N +F+N V ++E Y HP++ + T Q
Sbjct: 71 KIAGVDYVY-FVQKNSL-NSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFEQ 128
Query: 127 EAIITVKG-VSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170
A + +K S +E + +SN KG+E +E+ + +L E
Sbjct: 129 SASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQLEEE 173
>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 68.9 bits (167), Expect = 3e-12
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 9 VFDHPWETVTTAAMQKYPN-PMNPSVVGVDVLDRHIDPSGKLHS-HRLLSTEWGLPSIVK 66
V+ +P+E + A +++P P+ P VG D ++ G +H R + P ++K
Sbjct: 11 VYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLLK 70
Query: 67 SLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQ 126
+ G +VQ++S+ + E+T+ +++ N +F+N V ++E Y HP++ + T Q
Sbjct: 71 KIAGVDYVY-FVQKNSL-NSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFEQ 128
Query: 127 EAIITVKG-VSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170
A + +K S +E + +SN KG+E +E+ + +L E
Sbjct: 129 SASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQLEEE 173
>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
Length = 719
Score = 68.9 bits (167), Expect = 3e-12
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 9 VFDHPWETVTTAAMQKYPN-PMNPSVVGVDVLDRHIDPSGKLHS-HRLLSTEWGLPSIVK 66
V+ +P+E + A +++P P+ P VG D ++ G +H R + P ++K
Sbjct: 11 VYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLLK 70
Query: 67 SLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQ 126
+ G +VQ++S+ + E+T+ +++ N +F+N V ++E Y HP++ + T Q
Sbjct: 71 KIAGVDYVY-FVQKNSL-NSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFEQ 128
Query: 127 EAIITVKG-VSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170
A + +K S +E + +SN KG+E +E+ + +L E
Sbjct: 129 SASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQLEEE 173
>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 68.9 bits (167), Expect = 3e-12
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 9 VFDHPWETVTTAAMQKYPN-PMNPSVVGVDVLDRHIDPSGKLHS-HRLLSTEWGLPSIVK 66
V+ +P+E + A +++P P+ P VG D ++ G +H R + P ++K
Sbjct: 11 VYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLLK 70
Query: 67 SLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQ 126
+ G +VQ++S+ + E+T+ +++ N +F+N V ++E Y HP++ + T Q
Sbjct: 71 KIAGVDYVY-FVQKNSL-NSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFEQ 128
Query: 127 EAIITVKG-VSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170
A + +K S +E + +SN KG+E +E+ + +L E
Sbjct: 129 SASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQLEEE 173
>gi|33667079 PRELI domain containing 2 isoform a [Homo sapiens]
Length = 189
Score = 66.6 bits (161), Expect = 1e-11
Identities = 41/170 (24%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 9 VFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPS-GKLHSHRLLSTEWGLPSIVKS 67
V+ +P+E V + ++KYPNPM+ +V+ V +++ D S G ++ R+ + +P I++
Sbjct: 10 VYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK 69
Query: 68 LIGAARTKTY------------VQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 115
+ + ++E S ++P E+ M ++S +++T S+ E +++
Sbjct: 70 SLSTLVILCWKKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRES 129
Query: 116 PQDPEKTVLTQEAIITVKGVS-LSSYLEGLMASTISSNASKGREAMEWVI 164
++P T Q I++ GV L+ LE ++ + A KG ME ++
Sbjct: 130 MENPNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLL 179
>gi|150010661 SEC14-like 5 [Homo sapiens]
Length = 696
Score = 60.8 bits (146), Expect = 7e-10
Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 9 VFDHPWETVTTAAMQKYPN-PMNPSVVGVDVLDRHIDPSGKLHS-HRLLSTEWGLPSIVK 66
V+ +P+E V A +++P P P +G +VL P G +H R P +++
Sbjct: 11 VYKYPFELVMAAYEKRFPTCPQIPVFLGSEVLRESRSPDGAVHVVERSCRLRVDAPRLLR 70
Query: 67 SLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQ 126
+ G +VQ + +++ E+T+ +++ N +F N V V+E Y HP++ + T Q
Sbjct: 71 KIAGVEHV-VFVQTN-ILNWKERTLLIEAHNETFANRVVVNEHCSYTVHPENEDWTCFEQ 128
Query: 127 EAIITVKG-VSLSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELTA 176
A + ++ + LE + ++N +G+E +E H LN I + T+
Sbjct: 129 SASLDIRSFFGFENALEKIAMKQYTANVKRGKEVIE---HYLNELISQGTS 176
>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
Length = 681
Score = 55.8 bits (133), Expect = 2e-08
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 34 VGVDVLDRHIDPSGKLHS-HRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTME 92
VG D ++ G +H R + P ++K + G +VQ++S+ + E+T+
Sbjct: 3 VGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLLKKIAGVDYVY-FVQKNSL-NSRERTLH 60
Query: 93 LKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKG-VSLSSYLEGLMASTISS 151
+++ N +F+N V ++E Y HP++ + T Q A + +K S +E + +S
Sbjct: 61 IEAYNETFSNRVIINEHCCYTVHPENEDWTCFEQSASLDIKSFFGFESTVEKIAMKQYTS 120
Query: 152 NASKGREAMEWVIHKLNAE 170
N KG+E +E+ + +L E
Sbjct: 121 NIKKGKEIIEYYLRQLEEE 139
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.5 bits (75), Expect = 0.12
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 12 HPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIVKSLIGA 71
HP T+T+ + + PSV GV PS L + + E PS+ +
Sbjct: 822 HPTGTLTSESSESPSTLSLPSVSGVKTTFSSSTPSTHLFTSGEETEETSNPSVSQPETSV 881
Query: 72 ARTKTYVQEHSVVDPVEKTME---LKSTNISFTNMVS 105
+R +T + SV PV TM+ +S S +++VS
Sbjct: 882 SRVRTTLASTSVPTPVFPTMDTWPTRSAQFSSSHLVS 918
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 32.7 bits (73), Expect = 0.20
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLM 145
PVE+ E+KS+ S ++ ++ +++ + + QE I+ +K L+ M
Sbjct: 575 PVEEYEEMKSSYCSVIENMNKEKAFLFEKYQE-------AQEEIMKLKDT-----LKSQM 622
Query: 146 ASTISSNASKGREAMEWVIHKLNAEIEELT 175
S A +EAM +I +LN ++ EL+
Sbjct: 623 TQEASDEAEDMKEAMNRMIDELNKQVSELS 652
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 32.7 bits (73), Expect = 0.20
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLM 145
PVE+ E+KS+ S ++ ++ +++ + + QE I+ +K L+ M
Sbjct: 564 PVEEYEEMKSSYCSVIENMNKEKAFLFEKYQE-------AQEEIMKLKDT-----LKSQM 611
Query: 146 ASTISSNASKGREAMEWVIHKLNAEIEELT 175
S A +EAM +I +LN ++ EL+
Sbjct: 612 TQEASDEAEDMKEAMNRMIDELNKQVSELS 641
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 32.7 bits (73), Expect = 0.20
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLM 145
PVE+ E+KS+ S ++ ++ +++ + + QE I+ +K L+ M
Sbjct: 543 PVEEYEEMKSSYCSVIENMNKEKAFLFEKYQE-------AQEEIMKLKDT-----LKSQM 590
Query: 146 ASTISSNASKGREAMEWVIHKLNAEIEELT 175
S A +EAM +I +LN ++ EL+
Sbjct: 591 TQEASDEAEDMKEAMNRMIDELNKQVSELS 620
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.7 bits (73), Expect = 0.20
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLM 145
PVE+ E+KS+ S ++ ++ +++ + + QE I+ +K L+ M
Sbjct: 572 PVEEYEEMKSSYCSVIENMNKEKAFLFEKYQE-------AQEEIMKLKDT-----LKSQM 619
Query: 146 ASTISSNASKGREAMEWVIHKLNAEIEELT 175
S A +EAM +I +LN ++ EL+
Sbjct: 620 TQEASDEAEDMKEAMNRMIDELNKQVSELS 649
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.7 bits (73), Expect = 0.20
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLM 145
PVE+ E+KS+ S ++ ++ +++ + + QE I+ +K L+ M
Sbjct: 572 PVEEYEEMKSSYCSVIENMNKEKAFLFEKYQE-------AQEEIMKLKDT-----LKSQM 619
Query: 146 ASTISSNASKGREAMEWVIHKLNAEIEELT 175
S A +EAM +I +LN ++ EL+
Sbjct: 620 TQEASDEAEDMKEAMNRMIDELNKQVSELS 649
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 32.7 bits (73), Expect = 0.20
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVSLSSYLEGLM 145
PVE+ E+KS+ S ++ ++ +++ + + QE I+ +K L+ M
Sbjct: 572 PVEEYEEMKSSYCSVIENMNKEKAFLFEKYQE-------AQEEIMKLKDT-----LKSQM 619
Query: 146 ASTISSNASKGREAMEWVIHKLNAEIEELT 175
S A +EAM +I +LN ++ EL+
Sbjct: 620 TQEASDEAEDMKEAMNRMIDELNKQVSELS 649
>gi|21264315 EH-domain containing 4 [Homo sapiens]
Length = 541
Score = 28.9 bits (63), Expect = 2.9
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 86 PVEKTMELKSTNISFTNMVSVDERLIYK-----PHPQDPEKTVLTQEAIIT----VKGVS 136
P K M+ + N FT S+ +LI + P +++QE T V+G +
Sbjct: 357 PEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSNKISPLMNLISQEETSTPTQLVQGGA 416
Query: 137 LSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEEL 174
EG A +G + EWV+ K +EL
Sbjct: 417 FDGTTEGPFNQGYGEGAKEGADEEEWVVAKDKPVYDEL 454
>gi|4505781 phosphorylase kinase, alpha 2 (liver) [Homo sapiens]
Length = 1235
Score = 28.5 bits (62), Expect = 3.7
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 47 GKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMEL--------KSTNI 98
G+L+ L+ EWGL ++ + G R K V + D + +L + I
Sbjct: 808 GELYGKAGLNQEWGL---IRYISGLLRKKVEVLAEACTDLLSHQKQLTVGLPPEPREKII 864
Query: 99 SFTNMVSVDERLIYKPHPQDPEKTVLTQEAII 130
S +LIY+ QD VLTQE ++
Sbjct: 865 SAPLPPEELTKLIYEASGQDISIAVLTQEIVV 896
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 28.1 bits (61), Expect = 4.9
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 20/143 (13%)
Query: 13 PWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPSGKLHSHRLLSTEWGLPSIVKSLIGAA 72
P+++ TTA + P P + + + L S +ST PS +KS +GA+
Sbjct: 1502 PYQSWTTAPIT-VPGPAKSGFTSLSSSSSNTPSASPLKSIWSVST----PSPIKSTLGAS 1556
Query: 73 RTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITV 132
T + V P+ SF M S + ++ Q P ++ +
Sbjct: 1557 TTSSVKSISDVASPIR----------SFRTMSSPIKTVV----SQSPYNIQVSSGTLARA 1602
Query: 133 KGVSLSSYLEGLMA-STISSNAS 154
V+ ++ L+GL + ST SS S
Sbjct: 1603 PAVTEATPLKGLASNSTFSSRTS 1625
>gi|14149821 hypothetical protein LOC84103 [Homo sapiens]
Length = 359
Score = 28.1 bits (61), Expect = 4.9
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 19 TAAMQKYP-NPMNPSVVGVDVLDR-HIDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKT 76
+ A+QK P M+P+ G V R H +PS K+ S+E L I K I A R +
Sbjct: 86 STAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLV-IKKEEIKAKRPPS 144
Query: 77 YVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQEAIITVKGVS 136
+ S M ++ N + + P+ D E +L + I + S
Sbjct: 145 PPKACSTPGSCSSGMTSTKNDVK-ANTICI-------PNYLDQEIKILAKLCSI-LHTDS 195
Query: 137 LSSYLEGLMASTISSNASKGREAMEWVIHKLNAEIEELTASARGTIRTPMA 187
L+ L+ L+ +T SK +E + +IH AEI LT R T P A
Sbjct: 196 LAEVLQWLLHAT-----SKEKEWVSALIHSELAEINLLTHHRRNTSMEPAA 241
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.126 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,885,503
Number of Sequences: 37866
Number of extensions: 266956
Number of successful extensions: 576
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 29
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.