Guide to the Human Genome
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Name: OR2A25 Sequence: fasta or formatted (310aa) NCBI GI: 52317188
Description:

olfactory receptor, family 2, subfamily A, member 25

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         18           1
 C cysteine            4.2         13           1
 D aspartate           1.3          4           1
 E glutamate           3.2         10           1
 F phenylalanine       6.8         21           2
 G glycine             5.8         18           2
 H histidine           3.5         11           1
 I isoleucine          7.4         23           2
 K lysine              4.2         13           2
 L leucine            17.1         53           3
 M methionine          4.2         13           1
 N asparagine          2.6          8           1
 P proline             4.2         13           1
 Q glutamine           3.2         10           1
 R arginine            2.3          7           1
 S serine              7.4         23           2
 T threonine           5.2         16           1
 V valine              7.4         23           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily A, member 25... 
OR2A7                 0.779   olfactory receptor, family 2, subfamily A, member 7 ...
OR2A4                 0.771   olfactory receptor, family 2, subfamily A, member 4 ...
OR2A1                 0.726   olfactory receptor, family 2, subfamily A, member 1 ...
OR2A42                0.709   olfactory receptor, family 2, subfamily A, member 42...
OR2A5                 0.662   olfactory receptor, family 2, subfamily A, member 5 ...
OR2A12                0.640   olfactory receptor, family 2, subfamily A, member 12...
OR2A14                0.624   olfactory receptor, family 2, subfamily A, member 14...
OR2A2                 0.617   olfactory receptor, family 2, subfamily A, member 2...
OR2D3                 0.436   olfactory receptor, family 2, subfamily D, member 3 ...
OR2D2                 0.435   olfactory receptor, family 2, subfamily D, member 2 ...
OR1F1                 0.435   olfactory receptor, family 1, subfamily F, member 1 [...
OR1N1                 0.433   olfactory receptor, family 1, subfamily N, member 1 ...
OR13F1                0.431   olfactory receptor, family 13, subfamily F, member 1...
OR10A7                0.430   olfactory receptor, family 10, subfamily A, member 7...
OR2C1                 0.428   olfactory receptor, family 2, subfamily C, member 1...
OR2B2                 0.426   olfactory receptor, family 2, subfamily B, member 2 ...
OR5V1                 0.425   olfactory receptor, family 5, subfamily V, member 1 ...
OR1J1                 0.425   olfactory receptor, family 1, subfamily J, member 1 ...
OR2G3                 0.425   olfactory receptor, family 2, subfamily G, member 3 ...
OR10A3                0.423   olfactory receptor, family 10, subfamily A, member 3...
OR5AP2                0.423   olfactory receptor, family 5, subfamily AP, member 2...
OR10R2                0.423   olfactory receptor, family 10, subfamily R, member 2...
OR1E1                 0.423   olfactory receptor, family 1, subfamily E, member 1...
OR2G6                 0.421   olfactory receptor, family 2, subfamily G, member 6 ...
OR1J4                 0.421   olfactory receptor, family 1, subfamily J, member 4 ...
OR2F1                 0.418   olfactory receptor, family 2, subfamily F, member 1 ...
OR13C9                0.418   olfactory receptor, family 13, subfamily C, member 9...
OR5R1                 0.416   olfactory receptor, family 5, subfamily R, member 1 ...
OR13D1                0.415   olfactory receptor, family 13, subfamily D, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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